Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu027798.1 Olea europaea HOM05D006894 ORTHO05D008724 3.9e-243 844.3 418 100.0
Migut.B00823 Erythranthe guttata HOM05D006894 ORTHO05D008724 1.2e-167 593.6 412 71.8
Nitab4.5_0000816g0080 Nicotiana tabacum HOM05D006894 ORTHO05D008724 1.4e-163 580.1 415 69.9
GSVIVG01022874001 Vitis vinifera HOM05D006894 ORTHO05D008724 1.2e-162 577.0 413 70.2
CAN.G798.8 Capsicum annuum HOM05D006894 ORTHO05D008724 1.5e-162 576.6 362 77.3
QL02p099211 Quercus lobata HOM05D006894 ORTHO05D008724 1.3e-161 573.5 366 75.1
Solyc01g104060.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 1.7e-161 573.2 411 69.3
Sopen01g046470 Solanum pennellii HOM05D006894 ORTHO05D008724 6.4e-161 571.2 416 69.0
Nitab4.5_0010336g0030 Nicotiana tabacum HOM05D006894 ORTHO05D008724 4.1e-160 568.5 387 73.1
MSTRG.20303 Avicennia marina HOM05D006894 ORTHO05D008724 5.4e-160 568.2 412 69.2
Peaxi162Scf00017g02640 Petunia axillaris HOM05D006894 ORTHO05D008724 2.7e-159 565.8 348 78.4
Ciclev10001270m.g Citrus clementina HOM05D006894 ORTHO05D008724 1.7e-158 563.1 386 70.7
Atru.chr6.599 Acer truncatum HOM05D006894 ORTHO05D008724 3.0e-158 562.4 378 71.7
Cfa005507 Carpinus fangiana HOM05D006894 ORTHO05D008724 5.0e-158 561.6 361 74.8
Atru.chr6.614 Acer truncatum HOM05D006894 ORTHO05D008724 6.6e-158 561.2 377 71.6
Phvul.002G249600 Phaseolus vulgaris HOM05D006894 ORTHO05D008724 1.5e-157 560.1 416 67.5
Gohir.D02G214600 Gossypium hirsutum HOM05D006894 ORTHO05D008724 7.3e-157 557.8 375 70.4
Gorai.005G242400 Gossypium raimondii HOM05D006894 ORTHO05D008724 7.3e-157 557.8 375 70.4
Glyma.05G168900 Glycine max HOM05D006894 ORTHO05D008724 1.2e-156 557.0 424 66.7
Gohir.A03G193500 Gossypium hirsutum HOM05D006894 ORTHO05D008724 1.6e-156 556.6 375 70.4
VMungo0251G0921 Vigna mungo HOM05D006894 ORTHO05D008724 1.6e-156 556.6 422 66.6
CANSAT11G1074 Cannabis sativa HOM05D006894 ORTHO05D008724 6.2e-156 554.7 402 69.2
Thecc.02G114400 Theobroma cacao HOM05D006894 ORTHO05D008724 6.2e-156 554.7 361 72.3
TWI14G1412 Tripterygium wilfordii HOM05D006894 ORTHO05D008724 1.4e-155 553.5 398 67.8
Peaxi162Scf00011g00531 Petunia axillaris HOM05D006894 ORTHO05D008724 8.9e-155 550.8 380 72.1
Duzib248G0689 Durio zibethinus HOM05D006894 ORTHO05D008724 2.0e-154 549.7 406 66.3
COL.COLO4_11781 Corchorus olitorius HOM05D006894 ORTHO05D008724 2.2e-153 546.2 426 64.6
TAR628G1558 Trochodendron aralioides HOM05D006894 ORTHO05D008724 2.9e-153 545.8 359 74.1
Lalb_Chr12g0204471 Lupinus albus HOM05D006894 ORTHO05D008724 4.9e-153 545.0 409 65.3
RcHm_v2.0_Chr7g0221781 Rosa chinensis HOM05D006894 ORTHO05D008724 4.9e-153 545.0 413 67.6
MD08G1235500 Malus domestica HOM05D006894 ORTHO05D008724 6.4e-153 544.7 413 66.1
CiPaw.05G048800 Carya illinoinensis HOM05D006894 ORTHO05D008724 8.3e-153 544.3 361 71.7
TPR.G23092 Trifolium pratense HOM05D006894 ORTHO05D008724 2.4e-152 542.7 377 69.0
Prupe.1G571400 Prunus persica HOM05D006894 ORTHO05D008724 3.2e-152 542.3 357 73.7
Lj9A304G82 Lonicera japonica HOM05D006894 ORTHO05D008724 1.2e-151 540.4 389 69.7
Nn1g08851 Nelumbo nucifera HOM05D006894 ORTHO05D008724 1.6e-151 540.0 359 71.0
arahy.Tifrunner.gnm1.ann1.NZQI89 Arachis hypogaea HOM05D006894 ORTHO05D008724 3.5e-151 538.9 386 67.6
FAN08G3638 Fragaria x ananassa HOM05D006894 ORTHO05D008724 6.0e-151 538.1 412 66.7
Psat7g062040 Pisum sativum HOM05D006894 ORTHO05D008724 7.8e-151 537.7 417 65.2
PGSC0003DMG400023767 Solanum tuberosum HOM05D006894 ORTHO05D008724 1.7e-150 536.6 392 68.6
Lsat_1_v5_gn_9_118621 Lactuca sativa HOM05D006894 ORTHO05D008724 3.0e-150 535.8 359 71.6
arahy.Tifrunner.gnm1.ann1.7VS6FJ Arachis hypogaea HOM05D006894 ORTHO05D008724 5.0e-150 535.0 359 71.0
Ca_17824_v3 Cicer arietinum L. HOM05D006894 ORTHO05D008724 6.6e-150 534.6 359 71.6
Manes.07G017700 Manihot esculenta HOM05D006894 ORTHO05D008724 1.5e-149 533.5 361 70.1
HanXRQChr09g0249011 Helianthus annuus HOM05D006894 ORTHO05D008724 7.3e-149 531.2 361 70.9
Cc02_g22630 Coffea canephora HOM05D006894 ORTHO05D008724 8.1e-148 527.7 361 73.4
Medtr8g088790 Medicago truncatula HOM05D006894 ORTHO05D008724 1.1e-147 527.3 417 63.3
PSO528G0189 Papaver somniferum HOM05D006894 ORTHO05D008724 1.8e-147 526.6 361 70.4
CsaV3_6G037480 Cucumis sativus L. HOM05D006894 ORTHO05D008724 3.1e-147 525.8 361 70.6
PSO170G1552 Papaver somniferum HOM05D006894 ORTHO05D008724 3.1e-147 525.8 361 70.4
Lj4g0002387 Lotus japonicus HOM05D006894 ORTHO05D008724 4.4e-146 521.9 331 73.7
ECA240G3758 Erigeron canadensis HOM05D006894 ORTHO05D008724 1.7e-145 520.0 359 70.2
CARHR052050 Cardamine hirsuta HOM05D006894 ORTHO05D008724 2.9e-145 519.2 404 64.6
BcaC09g49347 Brassica carinata HOM05D006894 ORTHO05D008724 6.4e-145 518.1 418 62.2
Sp2g03530 Schrenkiella parvula HOM05D006894 ORTHO05D008724 6.4e-145 518.1 359 69.6
A01p29780 Brassica napus HOM05D006894 ORTHO05D008724 1.1e-144 517.3 418 62.2
Thhalv10023478m.g Eutrema salsugineum HOM05D006894 ORTHO05D008724 4.1e-144 515.4 359 69.1
vmacro01754 Vaccinium macrocarpon HOM05D006894 ORTHO05D008724 7.1e-144 514.6 463 59.6
AT1G60990 Arabidopsis thaliana HOM05D006894 ORTHO05D008724 9.2e-144 514.2 359 69.6
C01p37610 Brassica napus HOM05D006894 ORTHO05D008724 3.5e-143 512.3 385 65.5
THA.LOC104809620 Tarenaya hassleriana HOM05D006894 ORTHO05D008724 3.5e-143 512.3 361 68.4
AL2G15470 Arabidopsis lyrata HOM05D006894 ORTHO05D008724 4.6e-143 511.9 397 64.7
DCAR_006702 Daucus carota HOM05D006894 ORTHO05D008724 7.8e-143 511.1 418 62.7
Aqoxy6G00238 Aquilegia oxysepala HOM05D006894 ORTHO05D008724 1.3e-142 510.4 358 68.4
Eucgr.G00568 Eucalyptus grandis HOM05D006894 ORTHO05D008724 2.3e-142 509.6 359 68.2
Carub.0002s0422 Capsella rubella HOM05D006894 ORTHO05D008724 1.1e-141 507.3 359 68.5
CDE08G1218 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 3.3e-141 505.8 361 67.0
Rhsim11G0128300 Rhododendron simsii HOM05D006894 ORTHO05D008724 4.3e-141 505.4 385 66.2
Sed0001229 Sechium edule HOM05D006894 ORTHO05D008724 2.8e-140 502.7 347 70.3
Aa31LG2G9600 Aethionema arabicum HOM05D006894 ORTHO05D008724 4.0e-139 498.8 369 65.9
PGR042G0448 Punica granatum HOM05D006894 ORTHO05D008724 4.0e-139 498.8 318 75.5
Actinidia39033 Actinidia chinensis HOM05D006894 ORTHO05D008724 4.4e-138 495.4 344 72.1
FAN18G4164 Fragaria x ananassa HOM05D006894 ORTHO05D008724 4.9e-137 491.9 414 62.8
ATR0665G083 Amborella trichopoda HOM05D006894 ORTHO05D008724 1.6e-135 486.9 371 64.4
Sc15g0002580 Simmondsia chinensis HOM05D006894 ORTHO05D008724 3.0e-134 482.6 360 64.2
FvH4_5g29120 Fragaria vesca HOM05D006894 ORTHO05D008724 2.1e-132 476.5 377 65.8
FAN04G0479 Fragaria x ananassa HOM05D006894 ORTHO05D008724 2.9e-129 466.1 377 64.7
Actinidia30531 Actinidia chinensis HOM05D006894 ORTHO05D008724 8.4e-129 464.5 348 67.2
MBI06_g01072_MAGBIO Magnolia biondii HOM05D006894 ORTHO05D008724 2.4e-128 463.0 478 52.7
BcaB04g20304 Brassica carinata HOM05D006894 ORTHO05D008724 9.3e-128 461.1 416 57.2
Dinv19376 Davidia involucrata HOM05D006894 ORTHO05D008724 1.9e-120 436.8 286 74.5
SEGI_07604 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 3.5e-119 432.6 356 61.5
Haze_01731 Corylus avellana HOM05D006894 ORTHO05D008724 4.2e-112 409.1 432 51.6
Mapoly0039s0108 Marchantia polymorpha HOM05D006894 ORTHO05D008724 1.3e-110 404.1 357 54.9
AagrBONN_evm.TU.Sc2ySwM_344.1590 Anthoceros agrestis HOM05D006894 ORTHO05D007218 5.6e-109 398.7 314 59.2
MELO3C014368.2 Cucumis melo HOM05D006894 ORTHO05D008724 3.2e-104 382.9 379 53.8
unitig_749.g14128 Utricularia gibba HOM05D006894 ORTHO05D008724 8.2e-100 368.2 333 58.0
SMO119G0367 Selaginella moellendorffii HOM05D006894 ORTHO05D008724 5.9e-98 362.1 346 51.4
CBR_g30837 Chara braunii HOM05D000019 ORTHO05D000048 3.8e-97 359.4 329 54.1
Pp3c9_20800 Physcomitrium patens HOM05D006894 ORTHO05D008724 5.0e-97 359.0 360 50.0
CSS0024184 Camellia sinensis var. sinensis HOM05D006894 ORTHO05D008724 3.2e-96 356.3 365 53.2
FAN13G2283 Fragaria x ananassa HOM05D006894 ORTHO05D008724 9.3e-96 354.8 377 53.3
BraA01t03106Z Brassica rapa HOM05D006894 ORTHO05D008724 1.1e-91 341.3 292 60.6
BolC1t03726H Brassica oleracea HOM05D006894 ORTHO05D008724 1.2e-90 337.8 259 65.3
SEGI_10844 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 5.9e-74 282.3 313 50.5
Rhsim09G0048600 Rhododendron simsii HOM05D006894 ORTHO05D008724 1.2e-63 248.1 352 44.0
Cre12.g552850 Chlamydomonas reinhardtii HOM05D006894 ORTHO05D008724 4.8e-60 236.1 373 37.8
Cpa.g.sc30.18 Carica papaya HOM05D006894 ORTHO05D008724 4.9e-52 209.5 129 75.2
ClCG09G014030 Citrullus lanatus HOM05D006894 ORTHO05D008724 4.5e-50 203.0 125 73.6
Rhsim09G0016000 Rhododendron simsii HOM05D006894 ORTHO05D008724 2.6e-45 187.2 180 56.7
BcaB01g03502 Brassica carinata HOM05D006894 ORTHO05D008724 4.3e-40 169.9 133 63.2
BcaB05g23073 Brassica carinata HOM05D006894 ORTHO05D008724 2.0e-37 161.0 108 69.4
unitig_749.g14127 Utricularia gibba HOM05D006894 ORTHO05D008724 1.9e-24 117.9 76 76.3
BcaB02g10691 Brassica carinata HOM05D000189 ORTHO05D000474 2.5e-24 117.5 124 50.8
Cpa.g.sc30.19 Carica papaya HOM05D006894 ORTHO05D008724 3.3e-24 117.1 112 50.9
ClCG09G014040 Citrullus lanatus HOM05D006894 ORTHO05D008724 3.6e-23 113.6 79 63.3
Duzib052G1224 Durio zibethinus HOM05D006894 ORTHO05D008724 6.2e-23 112.8 153 44.4
Pp3c5_7230 Physcomitrium patens HOM05D006894 ORTHO05D008724 5.8e-21 106.3 168 40.5
PRCOL_00004673 Prasinoderma coloniale HOM05D006894 ORTHO05D008724 1.9e-19 101.3 345 27.5
Solyc09g015460.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 3.2e-19 100.5 58 82.8
CAN.G798.10 Capsicum annuum HOM05D006894 ORTHO05D008724 2.1e-18 97.8 180 36.1
Glyma.08G127500 Glycine max HOM05D006894 ORTHO05D008724 1.3e-17 95.1 106 46.2
Peaxi162Scf01350g00016 Petunia axillaris HOM05D006894 ORTHO05D008724 1.1e-14 85.5 73 60.3
CDE06G1775 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 3.1e-14 84.0 228 30.3
ClCG09G014050 Citrullus lanatus HOM05D006894 ORTHO05D008724 1.0e-09 68.9 60 60.0
Cpa.g.sc3656.1 Carica papaya HOM05D006894 ORTHO05D008724 8.1e-07 59.3 87 41.4
CAN.G536.1 Capsicum annuum HOM05D006894 ORTHO05D000067 4.0e-06 57.0 32 75.0


User provided reference genes

Program Settings