Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu027753.1 Olea europaea HOM05D001043 ORTHO05D006432 7.0e-267 923.3 444 100.0
Oeu022683.1 Olea europaea HOM05D001043 ORTHO05D006432 6.4e-236 820.5 444 88.7
SalBow3G3815 Salvia bowleyana HOM05D001043 ORTHO05D006432 5.3e-206 721.1 444 74.5
SGA_v2.0_scaffold12G06170 Striga asiatica HOM05D001043 ORTHO05D006432 6.9e-198 694.1 456 71.7
MSTRG.9754 Avicennia marina HOM05D001043 ORTHO05D006432 1.0e-193 680.2 444 72.3
Nitab4.5_0006064g0010 Nicotiana tabacum HOM05D001043 ORTHO05D006432 1.0e-193 680.2 444 71.6
Nitab4.5_0001586g0110 Nicotiana tabacum HOM05D001043 ORTHO05D006432 3.1e-190 668.7 444 70.9
Peaxi162Scf00180g00029 Petunia axillaris HOM05D001043 ORTHO05D006432 1.2e-189 666.8 444 70.3
Duzib212G0937 Durio zibethinus HOM05D001043 ORTHO05D006432 5.7e-184 647.9 442 68.8
CAN.G136.20 Capsicum annuum HOM05D001043 ORTHO05D006432 1.1e-182 643.7 444 68.0
PGSC0003DMG400016341 Solanum tuberosum HOM05D001043 ORTHO05D006432 1.2e-181 640.2 444 68.2
Sopen06g018400 Solanum pennellii HOM05D001043 ORTHO05D006432 2.6e-181 639.0 444 68.2
Solyc06g053340.3 Solanum lycopersicum HOM05D001043 ORTHO05D006432 1.7e-180 636.3 444 67.8
Dinv44154 Davidia involucrata HOM05D001043 ORTHO05D006432 3.8e-180 635.2 427 71.0
Cc03_g12190 Coffea canephora HOM05D001043 ORTHO05D006432 5.5e-179 631.3 443 67.0
Thecc.04G175400 Theobroma cacao HOM05D001043 ORTHO05D006432 2.7e-178 629.0 442 67.4
CSS0043871 Camellia sinensis var. sinensis HOM05D001043 ORTHO05D006432 6.1e-178 627.9 444 66.2
QL10p050774 Quercus lobata HOM05D001043 ORTHO05D006432 5.7e-176 621.3 443 66.1
Actinidia27085 Actinidia chinensis HOM05D001043 ORTHO05D006432 2.4e-174 615.9 444 65.3
Lsat_1_v5_gn_3_125361 Lactuca sativa HOM05D001043 ORTHO05D006432 5.3e-174 614.8 444 66.2
Cfa015192 Carpinus fangiana HOM05D001043 ORTHO05D006432 3.5e-173 612.1 444 65.3
Ciclev10020184m.g Citrus clementina HOM05D001043 ORTHO05D006432 3.5e-173 612.1 444 63.7
Hma1.2p1_2415F.1_g321710 Hydrangea macrophylla HOM05D001043 ORTHO05D006432 4.5e-173 611.7 444 66.0
Atru.chr4.1261 Acer truncatum HOM05D001043 ORTHO05D006432 8.5e-172 607.4 444 65.3
SalBow3G1676 Salvia bowleyana HOM05D001043 ORTHO05D006432 9.4e-171 604.0 365 76.2
Cpa.g.sc9.315 Carica papaya HOM05D001043 ORTHO05D006432 3.6e-170 602.1 444 64.0
Haze_01462 Corylus avellana HOM05D001043 ORTHO05D006432 4.7e-170 601.7 477 61.8
Potri.017G027000 Populus trichocarpa HOM05D001043 ORTHO05D006432 4.7e-170 601.7 444 66.2
Duzib268G1183 Durio zibethinus HOM05D001043 ORTHO05D006432 1.0e-169 600.5 445 64.7
Lj3g0012550 Lotus japonicus HOM05D001043 ORTHO05D006432 5.2e-169 598.2 445 64.5
arahy.Tifrunner.gnm1.ann1.41HRQM Arachis hypogaea HOM05D001043 ORTHO05D006432 8.8e-169 597.4 444 63.1
Nn7g38145 Nelumbo nucifera HOM05D001043 ORTHO05D006432 8.8e-169 597.4 444 62.8
Medtr4g068130 Medicago truncatula HOM05D001043 ORTHO05D006432 1.5e-168 596.7 444 62.6
HanXRQChr03g0092911 Helianthus annuus HOM05D001043 ORTHO05D006432 2.0e-168 596.3 442 64.0
TAR365G1116 Trochodendron aralioides HOM05D001043 ORTHO05D006432 9.7e-168 594.0 444 63.3
ECA240G3866 Erigeron canadensis HOM05D001043 ORTHO05D006432 2.8e-167 592.4 442 63.8
arahy.Tifrunner.gnm1.ann1.AV1GYT Arachis hypogaea HOM05D001043 ORTHO05D006432 4.8e-167 591.7 444 62.6
Gorai.005G015800 Gossypium raimondii HOM05D001043 ORTHO05D006432 1.4e-166 590.1 443 63.0
Lalb_Chr01g0003101 Lupinus albus HOM05D001043 ORTHO05D006432 1.8e-166 589.7 442 62.7
Potri.007G130900 Populus trichocarpa HOM05D001043 ORTHO05D006432 1.8e-166 589.7 444 64.0
Gohir.D02G012400 Gossypium hirsutum HOM05D001043 ORTHO05D006432 3.1e-166 589.0 443 62.8
PSO832G3319 Papaver somniferum HOM05D001043 ORTHO05D006432 3.1e-166 589.0 442 62.7
Eucgr.H00342 Eucalyptus grandis HOM05D001043 ORTHO05D006432 4.1e-166 588.6 444 62.2
Lj3A0G11 Lonicera japonica HOM05D001043 ORTHO05D006432 9.1e-166 587.4 418 66.7
MBI07_g18520_MAGBIO Magnolia biondii HOM05D001043 ORTHO05D006432 1.2e-165 587.0 444 62.6
THA.LOC104800885 Tarenaya hassleriana HOM05D001043 ORTHO05D006432 1.2e-165 587.0 444 62.2
RcHm_v2.0_Chr4g0406481 Rosa chinensis HOM05D001043 ORTHO05D006432 2.0e-165 586.3 445 63.4
MD04G1044900 Malus domestica HOM05D001043 ORTHO05D006432 2.6e-165 585.9 444 62.8
TAR636G2727 Trochodendron aralioides HOM05D001043 ORTHO05D006432 3.5e-165 585.5 444 62.6
FAN12G0575 Fragaria x ananassa HOM05D001043 ORTHO05D006432 4.5e-165 585.1 445 62.9
FvH4_4g10900 Fragaria vesca HOM05D001043 ORTHO05D006432 5.9e-165 584.7 445 62.9
Glyma.12G051100 Glycine max HOM05D001043 ORTHO05D006432 5.9e-165 584.7 444 62.2
PGR142G3303 Punica granatum HOM05D001043 ORTHO05D006432 5.9e-165 584.7 446 61.4
PSO210G3503 Papaver somniferum HOM05D001043 ORTHO05D006432 5.0e-164 581.6 442 61.8
Gohir.A02G011600 Gossypium hirsutum HOM05D001043 ORTHO05D006432 8.5e-164 580.9 443 62.5
TPR.G34197 Trifolium pratense HOM05D001043 ORTHO05D006432 8.5e-164 580.9 446 61.0
Sabra07G0106300 Salix brachista HOM05D001043 ORTHO05D006432 1.9e-163 579.7 489 58.9
VMungo1127G0978 Vigna mungo HOM05D001043 ORTHO05D006432 2.5e-163 579.3 444 61.5
Sc19g0002850 Simmondsia chinensis HOM05D001043 ORTHO05D006432 5.5e-163 578.2 444 62.2
FAN17G1903 Fragaria x ananassa HOM05D001043 ORTHO05D006432 2.1e-162 576.2 445 62.0
Manes.11G123700 Manihot esculenta HOM05D001043 ORTHO05D006432 1.4e-161 573.5 446 62.3
AL1G16060 Arabidopsis lyrata HOM05D001043 ORTHO05D006432 4.4e-160 568.5 445 60.9
Ca_20798_v3 Cicer arietinum L. HOM05D001043 ORTHO05D006432 2.2e-159 566.2 448 61.4
AT1G06110 Arabidopsis thaliana HOM05D001043 ORTHO05D006432 4.8e-159 565.1 446 59.9
CARHR005620 Cardamine hirsuta HOM05D001043 ORTHO05D006432 6.3e-159 564.7 446 60.8
Sp1g04910 Schrenkiella parvula HOM05D001043 ORTHO05D006432 3.1e-158 562.4 445 60.0
Sed0013039 Sechium edule HOM05D001043 ORTHO05D006432 4.1e-158 562.0 447 61.3
PGR142G0751 Punica granatum HOM05D001043 ORTHO05D006432 5.3e-158 561.6 446 59.9
CANSAT78G0880 Cannabis sativa HOM05D001043 ORTHO05D006432 7.0e-158 561.2 446 59.6
Thhalv10007687m.g Eutrema salsugineum HOM05D001043 ORTHO05D006432 3.8e-156 555.4 444 59.7
Migut.G01345 Erythranthe guttata HOM05D001043 ORTHO05D006432 2.5e-155 552.7 388 67.8
EL10Ac3g06009 Beta vulgaris HOM05D001043 ORTHO05D006432 1.2e-154 550.4 442 59.3
Aa31LG1G7110 Aethionema arabicum HOM05D001043 ORTHO05D006432 2.3e-153 546.2 459 58.8
Aqoxy5G00006 Aquilegia oxysepala HOM05D001043 ORTHO05D006432 2.3e-153 546.2 446 59.2
A08p36110 Brassica napus HOM05D001043 ORTHO05D006432 1.5e-152 543.5 444 59.5
C08p02400 Brassica napus HOM05D001043 ORTHO05D006432 1.5e-152 543.5 445 59.6
BolC8t47032H Brassica oleracea HOM05D001043 ORTHO05D006432 1.5e-152 543.5 445 59.6
BraA08t35518Z Brassica rapa HOM05D001043 ORTHO05D006432 1.5e-152 543.5 444 59.5
Glyma.11G126500 Glycine max HOM05D001043 ORTHO05D006432 2.0e-152 543.1 420 61.2
Rhsim02G0082300 Rhododendron simsii HOM05D001043 ORTHO05D006432 1.7e-151 540.0 439 62.4
Carub.0001s0544 Capsella rubella HOM05D001043 ORTHO05D006432 2.2e-151 539.7 444 58.1
Dinv05076 Davidia involucrata HOM05D001043 ORTHO05D006432 8.3e-151 537.7 365 70.4
Rhsim02G0082200 Rhododendron simsii HOM05D001043 ORTHO05D006432 2.7e-149 532.7 444 61.0
ClCG05G007210 Citrullus lanatus HOM05D001043 ORTHO05D006432 2.3e-148 529.6 447 58.8
SalBow3G2442 Salvia bowleyana HOM05D001043 ORTHO05D006432 3.3e-147 525.8 314 78.3
AUR62002348 Chenopodium quinoa HOM05D001043 ORTHO05D006432 4.2e-147 525.4 442 58.4
MELO3C006795.2 Cucumis melo HOM05D001043 ORTHO05D006432 2.8e-146 522.7 447 57.5
Hund12412 Selenicereus undatus HOM05D001043 ORTHO05D006432 4.4e-144 515.4 441 56.7
CiPaw.01G096300 Carya illinoinensis HOM05D001043 ORTHO05D006432 9.8e-144 514.2 419 59.9
AUR62023842 Chenopodium quinoa HOM05D001043 ORTHO05D006432 3.7e-143 512.3 442 57.2
Hma1.2p1_2415F.1_g321720 Hydrangea macrophylla HOM05D001043 ORTHO05D006432 1.1e-142 510.8 382 63.9
CsaV3_3G015970 Cucumis sativus L. HOM05D001043 ORTHO05D006432 1.3e-140 503.8 404 59.9
Prupe.1G197800 Prunus persica HOM05D001043 ORTHO05D006432 4.3e-139 498.8 383 63.2
CSS0016711 Camellia sinensis var. sinensis HOM05D001043 ORTHO05D006432 1.2e-138 497.3 368 64.9
Psat7g209600 Pisum sativum HOM05D001043 ORTHO05D006432 3.4e-136 489.2 381 60.4
CDE07G0303 Ceratophyllum demersum HOM05D001043 ORTHO05D006432 5.8e-136 488.4 444 52.7
GSVIVG01010840001 Vitis vinifera HOM05D001043 ORTHO05D006432 9.8e-136 487.6 444 54.3
SHI29125 Sapria himalayana HOM05D001043 ORTHO05D006432 1.6e-133 480.3 446 54.3
Ah.04g153480 Amaranthus hybridus HOM05D001043 ORTHO05D006432 2.0e-133 479.9 442 54.1
ATR0743G191 Amborella trichopoda HOM05D001043 ORTHO05D006432 2.7e-133 479.6 444 51.8
Phvul.011G053400 Phaseolus vulgaris HOM05D001043 ORTHO05D006432 3.6e-130 469.2 382 58.9
BcaC05g24309 Brassica carinata HOM05D001043 ORTHO05D006432 1.3e-127 460.7 445 52.4
C05p04390 Brassica napus HOM05D001043 ORTHO05D006432 1.3e-127 460.7 445 52.4
BolC5t29212H Brassica oleracea HOM05D001043 ORTHO05D006432 1.3e-127 460.7 445 52.4
GSVIVG01010839001 Vitis vinifera HOM05D001043 ORTHO05D006432 1.7e-127 460.3 444 53.6
Os11g0265200 Oryza sativa ssp. japonica HOM05D001043 ORTHO05D006432 6.0e-125 451.8 445 51.7
Actinidia26504 Actinidia chinensis HOM05D001043 ORTHO05D006432 3.9e-124 449.1 417 54.4
FAN07G1629 Fragaria x ananassa HOM05D001043 ORTHO05D006432 4.0e-121 439.1 445 51.7
HPP92_004532 Vanilla planifolia HOM05D001043 ORTHO05D006432 1.4e-118 430.6 463 47.9
BcaB02g06824 Brassica carinata HOM05D001043 ORTHO05D006432 2.7e-117 426.4 448 49.6
MBI11_g10483_MAGBIO Magnolia biondii HOM05D001043 ORTHO05D006432 9.6e-115 417.9 437 50.3
HPP92_004523 Vanilla planifolia HOM05D001043 ORTHO05D006432 4.7e-114 415.6 458 46.9
DCAR_028429 Daucus carota HOM05D001043 ORTHO05D006432 8.1e-106 388.3 308 61.7
HanXRQChr09g0262091 Helianthus annuus HOM05D001043 ORTHO05D006432 6.6e-100 368.6 308 59.1
BraA10t42737Z Brassica rapa HOM05D001043 ORTHO05D006432 2.1e-98 363.6 447 46.1
QL10p050755 Quercus lobata HOM05D001043 ORTHO05D006432 2.6e-96 356.7 231 72.7
Pp3c5_14310 Physcomitrium patens HOM05D001043 ORTHO05D006432 3.9e-92 342.8 444 40.8
COL.COLO4_10086 Corchorus olitorius HOM05D001043 ORTHO05D006432 1.5e-91 340.9 382 47.6
CDE04G0865 Ceratophyllum demersum HOM05D001043 ORTHO05D006432 3.7e-90 336.3 438 40.6
Ciclev10023406m.g Citrus clementina HOM05D001043 ORTHO05D006432 6.2e-90 335.5 370 47.8
Mapoly0014s0053 Marchantia polymorpha HOM05D001043 ORTHO05D006432 1.4e-89 334.3 415 42.2
A10p04730 Brassica napus HOM05D001043 ORTHO05D006432 4.0e-89 332.8 446 43.9
SMO203G0209 Selaginella moellendorffii HOM05D001043 ORTHO05D006432 7.6e-88 328.6 442 41.0
Zm00001eb168760 Zea mays HOM05D001043 ORTHO05D006432 2.9e-87 326.6 442 38.9
Lj3A33G11 Lonicera japonica HOM05D001043 ORTHO05D006432 3.8e-87 326.2 245 62.4
Os11g0264700 Oryza sativa ssp. japonica HOM05D001043 ORTHO05D006432 2.1e-85 320.5 445 41.8
Rhsim02G0082000 Rhododendron simsii HOM05D000432 ORTHO05D000320 4.2e-78 296.2 312 49.7
CiPaw.02G052200 Carya illinoinensis HOM05D001043 ORTHO05D006432 7.4e-75 285.4 184 72.8
Hma1.2p1_1466F.1_g285390 Hydrangea macrophylla HOM05D001043 ORTHO05D006432 2.9e-71 273.5 232 57.3
CBR_g726 Chara braunii HOM05D001043 ORTHO05D006432 5.9e-64 249.2 514 33.1
Cre01.g005900 Chlamydomonas reinhardtii HOM05D001043 ORTHO05D006432 7.7e-56 222.2 486 31.7
Lj3A33G10 Lonicera japonica HOM05D001043 ORTHO05D006432 1.1e-54 218.4 142 72.5
CiPaw.02G052100 Carya illinoinensis HOM05D001043 ORTHO05D006432 5.9e-48 196.1 180 51.7
SEGI_03011 Sequoiadendron giganteum HOM05D001043 ORTHO05D006432 2.2e-39 167.5 157 51.6
PRCOL_00003688 Prasinoderma coloniale HOM05D001043 ORTHO05D006432 4.9e-34 149.8 492 28.7
HanXRQChr09g0262081 Helianthus annuus HOM05D001043 ORTHO05D006432 4.5e-32 143.3 102 62.7
HanXRQChr09g0250561 Helianthus annuus HOM05D001043 ORTHO05D006432 7.5e-27 125.9 93 62.4
DCAR_028430 Daucus carota HOM05D001043 ORTHO05D006432 9.8e-27 125.6 73 75.3
PGR142G2310 Punica granatum HOM05D001043 ORTHO05D006432 3.6e-21 107.1 72 63.9
HanXRQChr12g0370191 Helianthus annuus HOM05D001043 ORTHO05D006432 2.6e-11 74.3 69 52.2
MCO09G831 Micromonas commoda HOM05D001043 ORTHO05D006432 1.3e-10 72.0 92 42.4
Lj4g0025683 Lotus japonicus HOM05D006234 ORTHO05D007813 1.2e-08 65.5 151 32.5
HPP92_001303 Vanilla planifolia HOM05D006234 ORTHO05D007813 1.0e-07 62.4 114 33.3


User provided reference genes

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