Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu027679.1 Olea europaea HOM05D007913 ORTHO05D009599 2.1e-61 238.8 119 100.0
Oeu027681.1 Olea europaea HOM05D007913 ORTHO05D009599 2.1e-61 238.8 119 100.0
Oeu009783.1 Olea europaea HOM05D007913 ORTHO05D009599 6.1e-24 114.4 118 59.3
Migut.E00331 Erythranthe guttata HOM05D007913 ORTHO05D009599 6.3e-21 104.4 112 56.2
Actinidia14885 Actinidia chinensis HOM05D007913 ORTHO05D009599 6.9e-20 100.9 120 53.3
Oeu039264.1 Olea europaea HOM05D007913 ORTHO05D009599 6.9e-20 100.9 119 52.9
Hma1.2p1_0061F.1_g034050 Hydrangea macrophylla HOM05D007913 ORTHO05D009599 2.9e-18 95.5 111 55.9
Dinv04476 Davidia involucrata HOM05D007913 ORTHO05D009599 9.4e-17 90.5 114 48.2
Dinv21098 Davidia involucrata HOM05D007913 ORTHO05D009599 2.7e-16 89.0 89 56.2
MSTRG.13522 Avicennia marina HOM05D007913 ORTHO05D009599 6.1e-16 87.8 114 46.5
MSTRG.2241 Avicennia marina HOM05D007913 ORTHO05D009599 7.9e-16 87.4 122 47.5
Migut.E00332 Erythranthe guttata HOM05D007913 ORTHO05D009599 7.9e-16 87.4 119 51.3
Thecc.02G356200 Theobroma cacao HOM05D007913 ORTHO05D009599 1.4e-15 86.7 109 48.6
Cc00_g12370 Coffea canephora HOM05D007913 ORTHO05D009599 1.8e-15 86.3 125 48.0
TAR629G2111 Trochodendron aralioides HOM05D007913 ORTHO05D009599 3.0e-15 85.5 109 46.8
MSTRG.2240 Avicennia marina HOM05D007913 ORTHO05D009599 3.3e-14 82.0 120 45.8
Ciclev10033073m.g Citrus clementina HOM05D007913 ORTHO05D009599 7.4e-14 80.9 121 43.0
Rhsim09G0108800 Rhododendron simsii HOM05D007913 ORTHO05D009599 9.7e-14 80.5 118 46.6
SalBow8G2445 Salvia bowleyana HOM05D007913 ORTHO05D009599 1.3e-13 80.1 96 49.0
Rhsim09G0108600 Rhododendron simsii HOM05D007913 ORTHO05D009599 2.2e-13 79.3 122 45.9
MSTRG.13524 Avicennia marina HOM05D007913 ORTHO05D009599 4.8e-13 78.2 117 44.4
COL.COLO4_07914 Corchorus olitorius HOM05D007913 ORTHO05D009599 6.3e-13 77.8 112 50.9
MSTRG.13523 Avicennia marina HOM05D007913 ORTHO05D009599 1.4e-12 76.6 114 43.0
Nitab4.5_0000874g0150 Nicotiana tabacum HOM05D007913 ORTHO05D009599 1.4e-12 76.6 117 43.6
QL01p043366 Quercus lobata HOM05D007913 ORTHO05D009599 1.4e-12 76.6 110 47.3
TAR371G0046 Trochodendron aralioides HOM05D007913 ORTHO05D009599 1.4e-12 76.6 113 45.1
TAR374G0796 Trochodendron aralioides HOM05D007913 ORTHO05D009599 2.4e-12 75.9 113 44.2
Atru.chr11.1276 Acer truncatum HOM05D007913 ORTHO05D009599 6.9e-12 74.3 115 42.6
PGSC0003DMG400014558 Solanum tuberosum HOM05D007913 ORTHO05D009599 3.4e-11 72.0 117 47.0
MSTRG.13525 Avicennia marina HOM05D007913 ORTHO05D009599 7.7e-11 70.9 78 50.0
Nitab4.5_0000057g0320 Nicotiana tabacum HOM05D007913 ORTHO05D009599 7.7e-11 70.9 124 41.1
Nitab4.5_0003330g0030 Nicotiana tabacum HOM05D007913 ORTHO05D009599 1.0e-10 70.5 114 45.6
MSTRG.13526 Avicennia marina HOM05D007913 ORTHO05D009599 1.3e-10 70.1 114 42.1
vmacro23289 Vaccinium macrocarpon HOM05D007913 ORTHO05D009599 1.3e-10 70.1 117 45.3
Sopen05g005290 Solanum pennellii HOM05D007913 ORTHO05D009599 2.2e-10 69.3 128 41.4
MSTRG.832 Avicennia marina HOM05D007913 ORTHO05D009599 2.9e-10 68.9 117 42.7
Cfa000683 Carpinus fangiana HOM05D007913 ORTHO05D009599 3.8e-10 68.6 113 46.0
MBI16_g11028_MAGBIO Magnolia biondii HOM05D007913 ORTHO05D009599 3.8e-10 68.6 131 34.4
Nn4g23816 Nelumbo nucifera HOM05D007913 ORTHO05D009599 3.8e-10 68.6 115 40.9
Nitab4.5_0003330g0020 Nicotiana tabacum HOM05D007913 ORTHO05D009599 5.0e-10 68.2 122 39.3
MBI10_g16032_MAGBIO Magnolia biondii HOM05D007913 ORTHO05D009599 1.1e-09 67.0 130 36.9
Prupe.1G309800 Prunus persica HOM05D007913 ORTHO05D009599 1.1e-09 67.0 118 43.2
Peaxi162Scf00382g00033 Petunia axillaris HOM05D007913 ORTHO05D009599 1.4e-09 66.6 112 42.0
Potri.010G125900 Populus trichocarpa HOM05D007913 ORTHO05D009599 3.2e-09 65.5 108 41.7
Nitab4.5_0000874g0170 Nicotiana tabacum HOM05D007913 ORTHO05D009599 4.2e-09 65.1 116 45.7
MD13G1042800 Malus domestica HOM05D007913 ORTHO05D009599 5.5e-09 64.7 114 41.2
Actinidia18937 Actinidia chinensis HOM05D010627 ORTHO05D009599 9.4e-09 63.9 113 38.1
Manes.14G101600 Manihot esculenta HOM05D007913 ORTHO05D009599 9.4e-09 63.9 96 44.8
Nn3g17821 Nelumbo nucifera HOM05D007913 ORTHO05D009599 9.4e-09 63.9 116 37.1
RcHm_v2.0_Chr4g0435341 Rosa chinensis HOM05D007913 ORTHO05D009599 1.2e-08 63.5 115 40.0
Haze_06128 Corylus avellana HOM05D003281 ORTHO05D004128 2.1e-08 62.8 113 45.1
Peaxi162Scf00382g00026 Petunia axillaris HOM05D007913 ORTHO05D009599 2.1e-08 62.8 115 40.0
Duzib268G1152 Durio zibethinus HOM05D013794 ORTHO05D009599 5.1e-07 58.2 110 40.9
vmacro23288 Vaccinium macrocarpon HOM05D007913 ORTHO05D009599 5.1e-07 58.2 118 39.0
CANSAT01G0283 Cannabis sativa HOM05D007913 ORTHO05D009599 6.7e-07 57.8 121 37.2
Potri.008G119900 Populus trichocarpa HOM05D013794 ORTHO05D009599 6.7e-07 57.8 115 40.9
Rhsim12G0143600 Rhododendron simsii HOM05D007913 ORTHO05D009599 6.7e-07 57.8 87 40.2
Aqoxy3G00317 Aquilegia oxysepala HOM05D007913 ORTHO05D009599 1.5e-06 56.6 112 39.3
CSS0025071 Camellia sinensis var. sinensis HOM05D007913 ORTHO05D009599 1.5e-06 56.6 90 38.9
vmacro16450 Vaccinium macrocarpon HOM05D010627 ORTHO05D009599 3.3e-06 55.5 116 36.2
Actinidia35084 Actinidia chinensis HOM05D006108 ORTHO05D007605 4.4e-06 55.1 64 45.3
Nitab4.5_0006400g0040 Nicotiana tabacum HOM05D007913 ORTHO05D009599 4.4e-06 55.1 93 38.7
Lalb_Chr05g0222541 Lupinus albus HOM05D013982 ORTHO05D012395 5.7e-06 54.7 60 50.0
TAR362G0928 Trochodendron aralioides HOM05D007913 ORTHO05D009599 5.7e-06 54.7 58 51.7
FAN07G1066 Fragaria x ananassa HOM05D007913 ORTHO05D009599 7.4e-06 54.3 115 39.1
Actinidia35085 Actinidia chinensis HOM05D010627 ORTHO05D013125 9.7e-06 53.9 103 36.9


User provided reference genes

Program Settings