Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu027645.1 Olea europaea HOM05D005756 ORTHO05D018916 1.3e-38 162.9 105 100.0
Oeu021293.1 Olea europaea HOM05D005756 ORTHO05D007991 1.7e-17 92.8 81 86.4
Oeu052200.1 Olea europaea HOM05D005756 ORTHO05D007991 6.3e-17 90.9 80 78.8
Oeu032118.1 Olea europaea HOM05D005756 ORTHO05D007991 4.5e-15 84.7 59 72.9
Migut.K00325 Erythranthe guttata HOM05D005756 ORTHO05D007991 7.7e-15 84.0 53 75.5
Lj1C795T1 Lonicera japonica HOM05D005756 ORTHO05D018916 5.0e-14 81.3 98 54.1
GSVIVG01030075001 Vitis vinifera HOM05D005756 ORTHO05D007991 1.9e-13 79.3 52 82.7
Dinv26618 Davidia involucrata HOM05D005756 ORTHO05D007991 3.2e-13 78.6 52 82.7
Ciclev10018016m.g Citrus clementina HOM05D005756 ORTHO05D007991 4.2e-13 78.2 52 76.9
SalBow1G0676 Salvia bowleyana HOM05D005756 ORTHO05D007991 5.5e-13 77.8 47 78.7
Hma1.2p1_0545F.1_g176010 Hydrangea macrophylla HOM05D005756 ORTHO05D018916 7.2e-13 77.4 51 80.4
CSS0006225 Camellia sinensis var. sinensis HOM05D005756 ORTHO05D007991 1.2e-12 76.6 52 80.8
CAN.G60.7 Capsicum annuum HOM05D005756 ORTHO05D007991 1.2e-12 76.6 52 75.0
Rhsim04G0027400 Rhododendron simsii HOM05D005756 ORTHO05D007991 1.2e-12 76.6 53 77.4
Cpa.g.sc211.21 Carica papaya HOM05D005756 ORTHO05D018916 6.1e-12 74.3 62 69.4
Peaxi162Scf00218g00178 Petunia axillaris HOM05D005756 ORTHO05D007991 6.1e-12 74.3 52 73.1
Peaxi162Scf00802g00236 Petunia axillaris HOM05D005756 ORTHO05D007991 6.1e-12 74.3 51 74.5
Prupe.3G198700 Prunus persica HOM05D005756 ORTHO05D007991 1.8e-11 72.8 52 75.0
Actinidia35206 Actinidia chinensis HOM05D005756 ORTHO05D007991 3.0e-11 72.0 52 75.0
DCAR_019685 Daucus carota HOM05D005756 ORTHO05D018916 3.0e-11 72.0 52 73.1
Solyc05g041220.3 Solanum lycopersicum HOM05D005756 ORTHO05D007991 4.0e-11 71.6 52 73.1
THA.LOC104815437 Tarenaya hassleriana HOM05D005756 ORTHO05D007991 4.0e-11 71.6 52 75.0
Haze_12636 Corylus avellana HOM05D005756 ORTHO05D007991 5.2e-11 71.2 53 73.6
Nn1g03213 Nelumbo nucifera HOM05D005756 ORTHO05D007991 5.2e-11 71.2 52 71.2
SalBow1G7885 Salvia bowleyana HOM05D005756 ORTHO05D007991 6.8e-11 70.9 43 81.4
MD09G1126000 Malus domestica HOM05D005756 ORTHO05D007991 8.8e-11 70.5 52 75.0
FvH4_6g40720 Fragaria vesca HOM05D005756 ORTHO05D007991 1.2e-10 70.1 52 71.2
FAN05G2330 Fragaria x ananassa HOM05D005756 ORTHO05D007991 1.2e-10 70.1 52 71.2
FAN14G2144 Fragaria x ananassa HOM05D005756 ORTHO05D007991 1.2e-10 70.1 52 71.2
ClCG02G009290 Citrullus lanatus HOM05D005756 ORTHO05D007991 1.5e-10 69.7 52 71.2
Manes.13G062400 Manihot esculenta HOM05D005756 ORTHO05D007991 1.5e-10 69.7 52 73.1
Potri.014G166400 Populus trichocarpa HOM05D005756 ORTHO05D007991 1.5e-10 69.7 52 71.2
QL08p028191 Quercus lobata HOM05D005756 ORTHO05D007991 1.5e-10 69.7 52 75.0
SGA_v2.0_scaffold265G46105 Striga asiatica HOM05D005756 ORTHO05D007991 1.5e-10 69.7 58 63.8
TAR629G3088 Trochodendron aralioides HOM05D005756 ORTHO05D007991 1.5e-10 69.7 52 69.2
Manes.12G064800 Manihot esculenta HOM05D005756 ORTHO05D007991 2.0e-10 69.3 52 71.2
MELO3C025971.2 Cucumis melo HOM05D005756 ORTHO05D007991 2.6e-10 68.9 52 67.3
CsaV3_6G009540 Cucumis sativus L. HOM05D005756 ORTHO05D007991 2.6e-10 68.9 52 67.3
Lsat_1_v5_gn_7_97180 Lactuca sativa HOM05D005756 ORTHO05D007991 2.6e-10 68.9 52 69.2
Sabra14G0126700 Salix brachista HOM05D005756 ORTHO05D007991 2.6e-10 68.9 52 69.2
Sopen05g025200 Solanum pennellii HOM05D005756 ORTHO05D000001 2.6e-10 68.9 51 70.6
Dinv21288 Davidia involucrata HOM05D005756 ORTHO05D018916 1.3e-09 66.6 51 68.6
Aa31sc373G50 Aethionema arabicum HOM05D005756 ORTHO05D007991 1.7e-09 66.2 52 65.4
FAN09G1647 Fragaria x ananassa HOM05D005756 ORTHO05D007991 1.7e-09 66.2 52 67.3
HanXRQChr11g0328881 Helianthus annuus HOM05D005756 ORTHO05D007991 1.7e-09 66.2 51 64.7
unitig_748.g7200 Utricularia gibba HOM05D005756 ORTHO05D007991 1.7e-09 66.2 50 62.0
RcHm_v2.0_Chr2g0156171 Rosa chinensis HOM05D005756 ORTHO05D007991 2.8e-09 65.5 52 71.2
Solyc07g045560.1 Solanum lycopersicum HOM05D005756 ORTHO05D018916 2.8e-09 65.5 43 74.4
Actinidia18810 Actinidia chinensis HOM05D005756 ORTHO05D007991 4.9e-09 64.7 52 69.2
Carub.0007s3155 Capsella rubella HOM05D005756 ORTHO05D007991 6.3e-09 64.3 52 63.5
Gohir.D11G156320 Gossypium hirsutum HOM05D005756 ORTHO05D007991 6.3e-09 64.3 73 50.7
unitig_0.g2684 Utricularia gibba HOM05D005756 ORTHO05D007991 6.3e-09 64.3 56 57.1
AT5G35770 Arabidopsis thaliana HOM05D005756 ORTHO05D007991 8.3e-09 63.9 52 63.5
SHI10154 Sapria himalayana HOM05D005756 ORTHO05D007991 8.3e-09 63.9 56 62.5
Sed0018608 Sechium edule HOM05D005756 ORTHO05D007991 8.3e-09 63.9 52 67.3
AL7G44670 Arabidopsis lyrata HOM05D005756 ORTHO05D007991 1.1e-08 63.5 52 63.5
Duzib211G0508 Durio zibethinus HOM05D005756 ORTHO05D007991 1.1e-08 63.5 52 63.5
Migut.J01345 Erythranthe guttata HOM05D005756 ORTHO05D007991 1.1e-08 63.5 55 60.0
Duzib133G1068 Durio zibethinus HOM05D005756 ORTHO05D007991 1.4e-08 63.2 47 66.0
Gohir.A07G164300 Gossypium hirsutum HOM05D005756 ORTHO05D007991 1.4e-08 63.2 52 65.4
Thecc.01G193500 Theobroma cacao HOM05D005756 ORTHO05D007991 1.4e-08 63.2 52 65.4
CiPaw.03G281000 Carya illinoinensis HOM05D005756 ORTHO05D007991 1.8e-08 62.8 52 69.2
Medtr5g097060 Medicago truncatula HOM05D005756 ORTHO05D007991 2.4e-08 62.4 52 67.3
Sp7g06350 Schrenkiella parvula HOM05D005756 ORTHO05D007991 4.1e-08 61.6 52 61.5
Ah.01g013810 Amaranthus hybridus HOM05D005756 ORTHO05D007991 5.4e-08 61.2 49 61.2
Gohir.A07G191400 Gossypium hirsutum HOM05D005756 ORTHO05D007991 5.4e-08 61.2 47 66.0
Gohir.D07G171500 Gossypium hirsutum HOM05D005756 ORTHO05D007991 5.4e-08 61.2 52 63.5
Gorai.001G191800 Gossypium raimondii HOM05D005756 ORTHO05D007991 5.4e-08 61.2 52 63.5
Gorai.001G221400 Gossypium raimondii HOM05D005756 ORTHO05D007991 5.4e-08 61.2 47 66.0
ECA236G0821 Erigeron canadensis HOM05D005756 ORTHO05D007991 7.0e-08 60.8 44 65.9
Atru.chr6.3377 Acer truncatum HOM05D005756 ORTHO05D007991 9.2e-08 60.5 68 52.9
ATR0624G001 Amborella trichopoda HOM05D005756 ORTHO05D007991 9.2e-08 60.5 49 61.2
Sed0020254 Sechium edule HOM05D005756 ORTHO05D007991 9.2e-08 60.5 41 73.2
COL.COLO4_33341 Corchorus olitorius HOM05D005756 ORTHO05D007991 1.6e-07 59.7 52 59.6
Nitab4.5_0000006g0690 Nicotiana tabacum HOM05D005756 ORTHO05D007991 1.6e-07 59.7 42 73.8
PGR042G1143 Punica granatum HOM05D005756 ORTHO05D007991 1.6e-07 59.7 40 72.5
Nitab4.5_0010487g0010 Nicotiana tabacum HOM05D005756 ORTHO05D007991 2.0e-07 59.3 42 73.8
Phvul.008G284100 Phaseolus vulgaris HOM05D005756 ORTHO05D007991 2.0e-07 59.3 52 65.4
BcaB06g26996 Brassica carinata HOM05D005756 ORTHO05D007991 3.5e-07 58.5 52 59.6
BcaC02g09499 Brassica carinata HOM05D005756 ORTHO05D007991 3.5e-07 58.5 52 59.6
C04p43490 Brassica napus HOM05D005756 ORTHO05D007991 3.5e-07 58.5 52 59.6
BolC4t25929H Brassica oleracea HOM05D005756 ORTHO05D007991 3.5e-07 58.5 52 59.6
Sc21g0000630 Simmondsia chinensis HOM05D005756 ORTHO05D007991 4.5e-07 58.2 41 70.7
Sc21g0000680 Simmondsia chinensis HOM05D005756 ORTHO05D018916 5.9e-07 57.8 41 68.3
CANSAT64G2821 Cannabis sativa HOM05D005756 ORTHO05D007991 1.0e-06 57.0 54 61.1
TPR.G1270 Trifolium pratense HOM05D005756 ORTHO05D007991 1.0e-06 57.0 52 65.4
A04p10010 Brassica napus HOM05D005756 ORTHO05D007991 1.3e-06 56.6 52 57.7
BraA04t16663Z Brassica rapa HOM05D005756 ORTHO05D007991 1.3e-06 56.6 52 57.7
LjContig00081g0010185 Lotus japonicus HOM05D005756 ORTHO05D007991 1.3e-06 56.6 52 61.5
AUR62015018 Chenopodium quinoa HOM05D005756 ORTHO05D007991 2.3e-06 55.8 53 54.7
Psat2g005040 Pisum sativum HOM05D005756 ORTHO05D007991 2.3e-06 55.8 52 63.5
Aqoxy4G02252 Aquilegia oxysepala HOM05D005756 ORTHO05D007991 8.6e-06 53.9 40 60.0


User provided reference genes

Program Settings