Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu027539.2 Olea europaea HOM05D006393 ORTHO05D008088 1.5e-150 536.2 277 100.0
SGA_v2.0_scaffold92G28235 Striga asiatica HOM05D006393 ORTHO05D008088 3.5e-83 312.4 284 62.0
Oeu046267.2 Olea europaea HOM05D006393 ORTHO05D008088 4.6e-83 312.0 426 51.2
Migut.C00826 Erythranthe guttata HOM05D006393 ORTHO05D008088 1.9e-81 306.6 290 63.4
Actinidia09396 Actinidia chinensis HOM05D006393 ORTHO05D008088 2.6e-78 296.2 292 58.9
CAN.G1665.6 Capsicum annuum HOM05D006393 ORTHO05D008088 4.5e-78 295.4 292 57.9
Hma1.2p1_0018F.1_g013070 Hydrangea macrophylla HOM05D006393 ORTHO05D008088 5.8e-78 295.0 292 58.9
MSTRG.1197 Avicennia marina HOM05D006393 ORTHO05D008088 1.3e-77 293.9 290 59.7
QL02p086364 Quercus lobata HOM05D006393 ORTHO05D008088 3.2e-76 289.3 291 56.7
Nitab4.5_0002551g0020 Nicotiana tabacum HOM05D006393 ORTHO05D008088 9.3e-76 287.7 292 57.2
Ciclev10008889m.g Citrus clementina HOM05D006393 ORTHO05D008088 2.1e-75 286.6 290 58.6
Atru.chr7.1280 Acer truncatum HOM05D006393 ORTHO05D008088 2.7e-75 286.2 290 57.2
Rhsim01G0090600 Rhododendron simsii HOM05D006393 ORTHO05D008088 2.7e-75 286.2 292 57.5
vmacro20677 Vaccinium macrocarpon HOM05D006393 ORTHO05D008088 3.5e-75 285.8 289 56.4
CiPaw.03G236400 Carya illinoinensis HOM05D006393 ORTHO05D008088 1.3e-74 283.9 292 55.5
MELO3C025307.2 Cucumis melo HOM05D006393 ORTHO05D008088 8.7e-74 281.2 290 56.9
Thecc.09G116800 Theobroma cacao HOM05D006393 ORTHO05D008088 8.7e-74 281.2 296 56.4
Manes.16G064200 Manihot esculenta HOM05D006393 ORTHO05D008088 1.9e-73 280.0 292 54.1
PGSC0003DMG401029823 Solanum tuberosum HOM05D006393 ORTHO05D008088 1.9e-73 280.0 292 54.8
Haze_25669 Corylus avellana HOM05D006393 ORTHO05D008088 2.5e-73 279.6 290 57.6
Prupe.7G235100 Prunus persica HOM05D006393 ORTHO05D008088 3.3e-73 279.3 290 55.9
Solyc10g079970.2 Solanum lycopersicum HOM05D006393 ORTHO05D008088 3.3e-73 279.3 292 54.5
Sopen10g030590 Solanum pennellii HOM05D006393 ORTHO05D008088 5.6e-73 278.5 292 54.8
TWI34G1546 Tripterygium wilfordii HOM05D006393 ORTHO05D008088 5.6e-73 278.5 290 55.5
Cfa003299 Carpinus fangiana HOM05D006393 ORTHO05D008088 7.4e-73 278.1 290 56.9
FvH4_1g04221 Fragaria vesca HOM05D006393 ORTHO05D008088 9.6e-73 277.7 296 53.0
CSS0031330 Camellia sinensis var. sinensis HOM05D006393 ORTHO05D008088 1.3e-72 277.3 292 55.5
RcHm_v2.0_Chr2g0089771 Rosa chinensis HOM05D006393 ORTHO05D008088 6.2e-72 275.0 290 53.1
ClCG06G010490 Citrullus lanatus HOM05D006393 ORTHO05D008088 1.1e-71 274.2 291 55.7
CsaV3_1G030940 Cucumis sativus L. HOM05D006393 ORTHO05D008088 1.1e-71 274.2 290 55.9
AUR62033415 Chenopodium quinoa HOM05D006393 ORTHO05D008088 1.8e-71 273.5 290 55.9
DCAR_010438 Daucus carota HOM05D006393 ORTHO05D008088 1.8e-71 273.5 292 54.8
Duzib168G1441 Durio zibethinus HOM05D006393 ORTHO05D008088 1.8e-71 273.5 296 56.1
Cpa.g.sc23.161 Carica papaya HOM05D006393 ORTHO05D008088 2.4e-71 273.1 296 54.7
COL.COLO4_34948 Corchorus olitorius HOM05D006393 ORTHO05D008088 4.0e-71 272.3 296 54.7
unitig_37.g13035 Utricularia gibba HOM05D006393 ORTHO05D008088 6.9e-71 271.6 291 57.7
Sed0023374 Sechium edule HOM05D006393 ORTHO05D008088 1.2e-70 270.8 290 55.2
GSVIVG01015453001 Vitis vinifera HOM05D006393 ORTHO05D008088 7.6e-70 268.1 290 55.2
MD02G1061500 Malus domestica HOM05D006393 ORTHO05D008088 1.0e-69 267.7 296 52.4
PGR102G0276 Punica granatum HOM05D006393 ORTHO05D008088 3.2e-68 262.7 289 55.0
Lalb_Chr13g0302251 Lupinus albus HOM05D006393 ORTHO05D008088 9.3e-68 261.2 291 53.3
PSO782G0281 Papaver somniferum HOM05D006393 ORTHO05D008088 2.7e-67 259.6 284 54.9
Potri.018G073000 Populus trichocarpa HOM05D006393 ORTHO05D008088 2.7e-67 259.6 290 52.8
Nn8g39292 Nelumbo nucifera HOM05D006393 ORTHO05D008088 3.5e-67 259.2 290 55.2
Aqoxy7G01879 Aquilegia oxysepala HOM05D006393 ORTHO05D008088 1.3e-66 257.3 287 52.6
arahy.Tifrunner.gnm1.ann1.3AE437 Arachis hypogaea HOM05D006393 ORTHO05D008088 1.3e-66 257.3 290 52.8
HanXRQChr03g0062141 Helianthus annuus HOM05D006393 ORTHO05D008088 1.3e-66 257.3 288 51.7
Gohir.D06G058100 Gossypium hirsutum HOM05D006393 ORTHO05D008088 3.0e-66 256.1 290 51.7
AL6G31460 Arabidopsis lyrata HOM05D006393 ORTHO05D008088 6.7e-66 255.0 284 54.2
Gohir.A06G059900 Gossypium hirsutum HOM05D006393 ORTHO05D008088 6.7e-66 255.0 288 51.4
Gorai.010G068300 Gossypium raimondii HOM05D006393 ORTHO05D008088 6.7e-66 255.0 290 51.7
arahy.Tifrunner.gnm1.ann1.RZM4QH Arachis hypogaea HOM05D006393 ORTHO05D008088 1.5e-65 253.8 288 52.8
BcaB08g36553 Brassica carinata HOM05D006393 ORTHO05D008088 2.5e-65 253.1 283 54.1
AT5G19930 Arabidopsis thaliana HOM05D006393 ORTHO05D008088 3.3e-65 252.7 283 52.3
Hund09172 Selenicereus undatus HOM05D006393 ORTHO05D008088 3.3e-65 252.7 289 50.2
EL10Ac8g18557 Beta vulgaris HOM05D006393 ORTHO05D008088 7.4e-65 251.5 289 51.6
Carub.0006s1830 Capsella rubella HOM05D006393 ORTHO05D008088 9.6e-65 251.1 283 51.2
BcaC04g19399 Brassica carinata HOM05D006393 ORTHO05D008088 1.3e-64 250.8 281 51.6
C09p56120 Brassica napus HOM05D006393 ORTHO05D008088 1.3e-64 250.8 281 51.6
BolC9t58479H Brassica oleracea HOM05D006393 ORTHO05D008088 1.3e-64 250.8 281 51.6
Psat4g042480 Pisum sativum HOM05D006393 ORTHO05D008088 1.3e-64 250.8 285 52.3
Sp6g24450 Schrenkiella parvula HOM05D006393 ORTHO05D008088 1.3e-64 250.8 284 53.5
A10p19800 Brassica napus HOM05D006393 ORTHO05D008088 4.8e-64 248.8 281 50.9
BraA10t44056Z Brassica rapa HOM05D006393 ORTHO05D008088 1.4e-63 247.3 281 50.2
VMungo1215G0586 Vigna mungo HOM05D006393 ORTHO05D008088 1.8e-63 246.9 284 51.8
AUR62011040 Chenopodium quinoa HOM05D006393 ORTHO05D008088 5.3e-63 245.4 266 54.5
Aa31LG9G6050 Aethionema arabicum HOM05D006393 ORTHO05D008088 9.0e-63 244.6 285 50.5
Sabra18G0063700 Salix brachista HOM05D006393 ORTHO05D008088 1.2e-62 244.2 290 51.7
TPR.G26762 Trifolium pratense HOM05D006393 ORTHO05D008088 1.2e-62 244.2 286 50.3
Phvul.003G159300 Phaseolus vulgaris HOM05D006393 ORTHO05D008088 1.5e-62 243.8 284 51.8
Medtr4g112990 Medicago truncatula HOM05D006393 ORTHO05D008088 2.0e-62 243.4 286 49.7
Ca_21724_v3 Cicer arietinum L. HOM05D006393 ORTHO05D008088 2.6e-62 243.0 284 52.5
Eucgr.C04142 Eucalyptus grandis HOM05D006393 ORTHO05D008088 4.5e-62 242.3 254 53.9
Lj4g0026371 Lotus japonicus HOM05D006393 ORTHO05D008088 4.5e-62 242.3 278 51.4
Glyma.17G120200 Glycine max HOM05D006393 ORTHO05D008088 5.9e-62 241.9 294 49.7
CDE06G0973 Ceratophyllum demersum HOM05D006393 ORTHO05D008088 7.6e-62 241.5 288 49.7
Thhalv10014278m.g Eutrema salsugineum HOM05D006393 ORTHO05D008088 1.3e-61 240.7 284 51.4
Lj7A639G46 Lonicera japonica HOM05D006393 ORTHO05D008088 2.2e-61 240.0 324 46.9
Nitab4.5_0010615g0010 Nicotiana tabacum HOM05D006393 ORTHO05D008088 3.8e-61 239.2 249 54.6
THA.LOC104815111 Tarenaya hassleriana HOM05D006393 ORTHO05D008088 3.8e-61 239.2 284 49.3
FAN23G0113 Fragaria x ananassa HOM05D006393 ORTHO05D008088 8.5e-61 238.0 296 48.6
Lsat_1_v5_gn_7_42880 Lactuca sativa HOM05D006393 ORTHO05D008088 4.2e-60 235.7 292 49.0
Ah.14g081310 Amaranthus hybridus HOM05D006393 ORTHO05D008088 1.6e-59 233.8 348 44.3
Os01g0507300 Oryza sativa ssp. japonica HOM05D006393 ORTHO05D008088 4.6e-59 232.3 289 49.1
MBI01_g13571_MAGBIO Magnolia biondii HOM05D006393 ORTHO05D008088 1.0e-58 231.1 287 50.9
MBI04_g35350_MAGBIO Magnolia biondii HOM05D006393 ORTHO05D008088 1.8e-58 230.3 249 53.0
ATR0083G026 Amborella trichopoda HOM05D006393 ORTHO05D008088 5.1e-58 228.8 292 48.3
HPP92_008697 Vanilla planifolia HOM05D006393 ORTHO05D008088 8.7e-58 228.0 288 46.9
Zm00001eb106640 Zea mays HOM05D006393 ORTHO05D008088 1.3e-56 224.2 292 44.9
HPP92_009792 Vanilla planifolia HOM05D006393 ORTHO05D008088 2.2e-56 223.4 298 47.3
Peaxi162Scf00223g01425 Petunia axillaris HOM05D006393 ORTHO05D008088 4.8e-56 222.2 305 48.9
Cc06_g09230 Coffea canephora HOM05D006393 ORTHO05D008088 3.1e-55 219.5 237 55.3
Zm00001eb122440 Zea mays HOM05D006393 ORTHO05D008088 5.9e-54 215.3 275 48.4
SEGI_37175 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 5.0e-53 212.2 292 44.9
CDE07G1479 Ceratophyllum demersum HOM05D006393 ORTHO05D008088 5.5e-52 208.8 168 59.5
SalBow7G4467 Salvia bowleyana HOM05D006393 ORTHO05D008088 3.3e-49 199.5 290 49.0
Os01g0178200 Oryza sativa ssp. japonica HOM05D006393 ORTHO05D008088 4.8e-48 195.7 330 39.1
Mapoly0052s0018 Marchantia polymorpha HOM05D006393 ORTHO05D008088 1.4e-47 194.1 287 43.2
Sc07g0007380 Simmondsia chinensis HOM05D006393 ORTHO05D008088 6.9e-47 191.8 238 50.4
ECA240G0151 Erigeron canadensis HOM05D006393 ORTHO05D008088 3.4e-46 189.5 221 50.7
Peaxi162Scf00223g01424 Petunia axillaris HOM05D006393 ORTHO05D008088 1.0e-45 188.0 200 55.5
SMO340G0297 Selaginella moellendorffii HOM05D006393 ORTHO05D008088 2.9e-45 186.4 298 40.6
Pp3c12_24880 Physcomitrium patens HOM05D006393 ORTHO05D008088 6.5e-45 185.3 284 39.8
Dinv41564 Davidia involucrata HOM05D006752 ORTHO05D008088 1.1e-44 184.5 179 57.0
Eucgr.L03082 Eucalyptus grandis HOM05D006393 ORTHO05D008088 4.7e-35 152.5 131 58.8
CARHR192920 Cardamine hirsuta HOM05D006393 ORTHO05D008088 9.7e-33 144.8 202 48.0
SEGI_23420 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 3.1e-31 139.8 119 54.6
SEGI_36873 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 4.7e-27 125.9 111 55.0
PRCOL_00002470 Prasinoderma coloniale HOM05D006393 ORTHO05D008088 6.1e-27 125.6 268 33.6
Cre02.g118200 Chlamydomonas reinhardtii HOM05D006393 ORTHO05D008088 1.3e-24 117.9 157 38.9
Eucgr.E03680 Eucalyptus grandis HOM05D006393 ORTHO05D008088 6.3e-24 115.5 96 60.4
Cre17.g726350 Chlamydomonas reinhardtii HOM05D006393 ORTHO05D008088 4.1e-23 112.8 324 31.8
SEGI_10855 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 3.2e-20 103.2 168 36.9
Zm00001eb342450 Zea mays HOM05D006393 ORTHO05D008088 1.0e-18 98.2 73 61.6
TAR636G2166 Trochodendron aralioides HOM05D006393 ORTHO05D008088 1.2e-17 94.7 63 65.1
vmacro16552 Vaccinium macrocarpon HOM05D006393 ORTHO05D008088 1.0e-10 71.6 144 39.6
MCO12G460 Micromonas commoda HOM05D006393 ORTHO05D008088 1.3e-08 64.7 160 34.4
SEGI_30446 Sequoiadendron giganteum HOM05D006393 ORTHO05D000979 1.8e-07 60.8 68 47.1
SEGI_14370 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 1.6e-06 57.8 57 49.1


User provided reference genes

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