Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu027371.1 Olea europaea HOM05D007133 ORTHO05D008954 3.1e-41 171.4 89 100.0
SGA_v2.0_scaffold5G02955 Striga asiatica HOM05D007133 ORTHO05D008954 6.3e-34 147.1 89 83.1
Cc02_g28790 Coffea canephora HOM05D007133 ORTHO05D008954 8.2e-34 146.7 87 85.1
Dinv03122 Davidia involucrata HOM05D007133 ORTHO05D008954 1.4e-33 146.0 89 83.1
Dinv09308 Davidia involucrata HOM05D007133 ORTHO05D008954 1.4e-33 146.0 89 83.1
Migut.N01798 Erythranthe guttata HOM05D007133 ORTHO05D008954 3.1e-33 144.8 89 80.9
Gohir.A12G100700 Gossypium hirsutum HOM05D007133 ORTHO05D008954 3.1e-33 144.8 89 80.9
Gohir.D12G103551 Gossypium hirsutum HOM05D007133 ORTHO05D008954 3.1e-33 144.8 89 80.9
Gorai.008G112700 Gossypium raimondii HOM05D007133 ORTHO05D008954 3.1e-33 144.8 89 80.9
vmacro21138 Vaccinium macrocarpon HOM05D007133 ORTHO05D008954 5.3e-33 144.1 89 82.0
Duzib268G0834 Durio zibethinus HOM05D007133 ORTHO05D008954 1.2e-32 142.9 89 79.8
COL.COLO4_12337 Corchorus olitorius HOM05D007133 ORTHO05D008954 2.0e-32 142.1 88 80.7
CiPaw.14G003100 Carya illinoinensis HOM05D007133 ORTHO05D008954 2.6e-32 141.7 89 80.9
Ciclev10033166m.g Citrus clementina HOM05D007133 ORTHO05D008954 2.6e-32 141.7 86 79.1
Nn7g36332 Nelumbo nucifera HOM05D007133 ORTHO05D008954 2.6e-32 141.7 89 82.0
Actinidia21538 Actinidia chinensis HOM05D007133 ORTHO05D008954 4.5e-32 141.0 89 79.8
Peaxi162Scf01270g00118 Petunia axillaris HOM05D007133 ORTHO05D008954 1.3e-31 139.4 89 79.8
MD02G1300200 Malus domestica HOM05D007133 ORTHO05D008954 1.7e-31 139.0 89 76.4
Prupe.2G024400 Prunus persica HOM05D007133 ORTHO05D008954 2.9e-31 138.3 88 76.1
Thecc.01G406600 Theobroma cacao HOM05D007133 ORTHO05D008954 8.5e-31 136.7 89 76.4
GSVIVG01032212001 Vitis vinifera HOM05D007133 ORTHO05D008954 1.1e-30 136.3 89 80.9
Hund26515 Selenicereus undatus HOM05D007133 ORTHO05D008954 1.9e-30 135.6 89 77.5
Eucgr.G03322 Eucalyptus grandis HOM05D007133 ORTHO05D008954 2.5e-30 135.2 89 77.5
Potri.001G262000 Populus trichocarpa HOM05D007133 ORTHO05D008954 4.2e-30 134.4 89 75.3
CSS0001581 Camellia sinensis var. sinensis HOM05D007133 ORTHO05D008954 5.5e-30 134.0 87 78.2
TWI53G1532 Tripterygium wilfordii HOM05D007133 ORTHO05D008954 1.6e-29 132.5 88 73.9
arahy.Tifrunner.gnm1.ann1.PZX0PK Arachis hypogaea HOM05D007133 ORTHO05D008954 2.1e-29 132.1 89 75.3
MD07G1024700 Malus domestica HOM05D007133 ORTHO05D008954 2.1e-29 132.1 89 73.0
Potri.009G056800 Populus trichocarpa HOM05D007133 ORTHO05D008954 2.1e-29 132.1 88 73.9
arahy.Tifrunner.gnm1.ann1.1B9UE2 Arachis hypogaea HOM05D007133 ORTHO05D008954 2.7e-29 131.7 89 75.3
Manes.10G136200 Manihot esculenta HOM05D007133 ORTHO05D008954 2.7e-29 131.7 89 76.4
Medtr0512s0010 Medicago truncatula HOM05D007133 ORTHO05D008954 2.7e-29 131.7 89 77.5
THA.LOC104817576 Tarenaya hassleriana HOM05D007133 ORTHO05D008954 3.6e-29 131.3 87 72.4
TPR.G30180 Trifolium pratense HOM05D007133 ORTHO05D008954 3.6e-29 131.3 89 76.4
Sabra09G0041600 Salix brachista HOM05D007133 ORTHO05D008954 4.7e-29 131.0 88 73.9
TWI09G1631 Tripterygium wilfordii HOM05D007133 ORTHO05D008954 4.7e-29 131.0 88 72.7
CsaV3_7G030730 Cucumis sativus L. HOM05D007133 ORTHO05D008954 8.0e-29 130.2 89 75.3
Glyma.09G226900 Glycine max HOM05D007133 ORTHO05D008954 1.0e-28 129.8 84 75.0
Glyma.12G009900 Glycine max HOM05D007133 ORTHO05D008954 1.0e-28 129.8 84 75.0
Lalb_Chr04g0263851 Lupinus albus HOM05D007133 ORTHO05D008954 1.4e-28 129.4 87 75.9
Nitab4.5_0008942g0020 Nicotiana tabacum HOM05D007133 ORTHO05D008954 1.4e-28 129.4 89 76.4
Phvul.001G156100 Phaseolus vulgaris HOM05D007133 ORTHO05D008954 3.0e-28 128.3 87 74.7
PGR031G3629 Punica granatum HOM05D007133 ORTHO05D008954 4.0e-28 127.9 89 71.9
FvH4_7g01820 Fragaria vesca HOM05D007133 ORTHO05D008954 5.2e-28 127.5 89 73.0
FAN01G1667 Fragaria x ananassa HOM05D007133 ORTHO05D008954 6.7e-28 127.1 88 72.7
HanXRQChr06g0179721 Helianthus annuus HOM05D007133 ORTHO05D008954 8.8e-28 126.7 83 74.7
RcHm_v2.0_Chr1g0318451 Rosa chinensis HOM05D007133 ORTHO05D008954 8.8e-28 126.7 89 71.9
Sc10g0000360 Simmondsia chinensis HOM05D007133 ORTHO05D008954 8.8e-28 126.7 86 75.6
SalBow6G3002 Salvia bowleyana HOM05D007133 ORTHO05D008954 1.2e-27 126.3 124 59.7
Ah.10g038590 Amaranthus hybridus HOM05D007133 ORTHO05D008954 1.5e-27 125.9 89 71.9
Phvul.011G010800 Phaseolus vulgaris HOM05D007133 ORTHO05D008954 1.5e-27 125.9 87 73.6
CDE08G1151 Ceratophyllum demersum HOM05D007133 ORTHO05D008954 3.3e-27 124.8 89 75.3
Lalb_Chr25g0282521 Lupinus albus HOM05D007133 ORTHO05D008954 3.3e-27 124.8 89 71.9
TAR633G1269 Trochodendron aralioides HOM05D007133 ORTHO05D008954 3.3e-27 124.8 89 75.3
Sed0015487 Sechium edule HOM05D007133 ORTHO05D008954 4.4e-27 124.4 93 68.8
Atru.chr11.2512 Acer truncatum HOM05D007133 ORTHO05D008954 5.7e-27 124.0 77 80.5
Lsat_1_v5_gn_1_104961 Lactuca sativa HOM05D007133 ORTHO05D008954 5.7e-27 124.0 77 79.2
Ca_26645_v3 Cicer arietinum L. HOM05D007133 ORTHO05D008954 9.7e-27 123.2 88 72.7
EL10Ac2g04374 Beta vulgaris HOM05D007133 ORTHO05D008954 1.7e-26 122.5 87 72.4
ECA248G0684 Erigeron canadensis HOM05D007133 ORTHO05D008954 2.2e-26 122.1 81 74.1
MELO3C023583.2 Cucumis melo HOM05D007133 ORTHO05D008954 2.8e-26 121.7 103 65.0
PSO063G0957 Papaver somniferum HOM05D007133 ORTHO05D008954 2.8e-26 121.7 88 72.7
AUR62023097 Chenopodium quinoa HOM05D007133 ORTHO05D008954 6.3e-26 120.6 89 67.4
PSO170G5856 Papaver somniferum HOM05D007133 ORTHO05D008954 6.3e-26 120.6 88 71.6
Lj3g0009786 Lotus japonicus HOM05D007133 ORTHO05D008954 1.1e-25 119.8 89 68.5
AL5G32580 Arabidopsis lyrata HOM05D007133 ORTHO05D008954 1.8e-25 119.0 87 69.0
Aqoxy1G00141 Aquilegia oxysepala HOM05D007133 ORTHO05D008954 3.1e-25 118.2 89 69.7
Carub.0005s1836 Capsella rubella HOM05D007133 ORTHO05D008954 3.1e-25 118.2 87 69.0
Aa31LG10G7080 Aethionema arabicum HOM05D007133 ORTHO05D008954 1.2e-24 116.3 88 69.3
BcaB01g00452 Brassica carinata HOM05D007133 ORTHO05D008954 1.2e-24 116.3 87 65.5
C08p27290 Brassica napus HOM05D007133 ORTHO05D008954 1.2e-24 116.3 87 65.5
BolC8t50346H Brassica oleracea HOM05D007133 ORTHO05D008954 1.2e-24 116.3 87 65.5
AT3G52040 Arabidopsis thaliana HOM05D007133 ORTHO05D008954 1.6e-24 115.9 87 66.7
Nitab4.5_0001244g0090 Nicotiana tabacum HOM05D007133 ORTHO05D008954 2.7e-24 115.2 115 59.1
FAN10G0509 Fragaria x ananassa HOM05D007133 ORTHO05D008954 3.5e-24 114.8 81 71.6
A09p45100 Brassica napus HOM05D007133 ORTHO05D008954 4.5e-24 114.4 87 64.4
BraA09t39971Z Brassica rapa HOM05D007133 ORTHO05D008954 4.5e-24 114.4 87 64.4
CANSAT80G0888 Cannabis sativa HOM05D007133 ORTHO05D008954 5.9e-24 114.0 89 66.3
Haze_03143 Corylus avellana HOM05D007133 ORTHO05D008954 7.7e-24 113.6 155 48.4
Haze_03146 Corylus avellana HOM05D007133 ORTHO05D008954 7.7e-24 113.6 155 48.4
ClCG09G004410 Citrullus lanatus HOM05D007133 ORTHO05D008954 1.0e-23 113.2 124 53.2
Thhalv10010861m.g Eutrema salsugineum HOM05D007133 ORTHO05D008954 1.3e-23 112.8 87 65.5
Solyc01g087880.3 Solanum lycopersicum HOM05D007133 ORTHO05D008954 1.3e-23 112.8 87 69.0
BcaC06g33021 Brassica carinata HOM05D007133 ORTHO05D008954 1.7e-23 112.5 91 65.9
Sopen01g034810 Solanum pennellii HOM05D007133 ORTHO05D008954 1.7e-23 112.5 95 67.4
Zm00001eb332910 Zea mays HOM05D007133 ORTHO05D008954 1.7e-23 112.5 87 63.2
C07p46740 Brassica napus HOM05D007133 ORTHO05D008954 2.9e-23 111.7 91 64.8
BolC7t45192H Brassica oleracea HOM05D007133 ORTHO05D008954 2.9e-23 111.7 91 64.8
BcaC06g33378 Brassica carinata HOM05D007133 ORTHO05D008954 3.8e-23 111.3 91 64.8
PGSC0003DMG400006836 Solanum tuberosum HOM05D007133 ORTHO05D008954 6.5e-23 110.5 83 71.1
BraA03t13967Z Brassica rapa HOM05D007133 ORTHO05D008954 2.5e-22 108.6 91 63.7
Cc00_g19310 Coffea canephora HOM05D004771 ORTHO05D005565 4.2e-22 107.8 83 73.5
unitig_8.g3622 Utricularia gibba HOM05D007133 ORTHO05D008954 4.2e-22 107.8 71 76.1
A03p48620 Brassica napus HOM05D007133 ORTHO05D008954 5.5e-22 107.5 87 60.9
Eucgr.G03325 Eucalyptus grandis HOM05D007133 ORTHO05D008954 7.2e-22 107.1 82 67.1
CARHR161670 Cardamine hirsuta HOM05D007133 ORTHO05D008954 9.4e-22 106.7 92 64.1
Dinv09304 Davidia involucrata HOM05D007133 ORTHO05D008954 1.5e-19 99.4 89 62.9
Medtr4g101060 Medicago truncatula HOM05D007133 ORTHO05D008954 3.1e-17 91.7 59 76.3
MBI19_g09240_MAGBIO Magnolia biondii HOM05D007133 ORTHO05D008954 2.0e-16 89.0 197 34.5
HPP92_001020 Vanilla planifolia HOM05D007133 ORTHO05D008954 1.0e-15 86.7 66 63.6
Rhsim01G0126300 Rhododendron simsii HOM05D007133 ORTHO05D008954 1.9e-14 82.4 48 85.4
Pp3c9_17680 Physcomitrium patens HOM05D007133 ORTHO05D008954 7.2e-14 80.5 86 53.5
QL04p010011 Quercus lobata HOM05D007133 ORTHO05D008954 7.2e-14 80.5 48 83.3
Duzib133G0944 Durio zibethinus HOM05D007133 ORTHO05D008954 1.2e-13 79.7 48 81.2
Hma1.2p1_0685F.1_g203210 Hydrangea macrophylla HOM05D007133 ORTHO05D008954 2.8e-13 78.6 49 79.6
AagrBONN_evm.TU.Sc2ySwM_344.2738 Anthoceros agrestis HOM05D007133 ORTHO05D008954 6.1e-13 77.4 87 50.6
Psat7g197280 Pisum sativum HOM05D007133 ORTHO05D008954 1.4e-12 76.3 58 69.0
Rhsim01G0126100 Rhododendron simsii HOM05D007133 ORTHO05D008954 2.6e-11 72.0 42 83.3
Mapoly0049s0103 Marchantia polymorpha HOM05D007133 ORTHO05D008954 4.4e-11 71.2 93 47.3
Os01g0271700 Oryza sativa ssp. japonica HOM05D007133 ORTHO05D008954 6.3e-10 67.4 48 68.8
Cc00_g26940 Coffea canephora HOM05D007133 ORTHO05D008954 2.0e-08 62.4 54 68.5


User provided reference genes

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