Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu027356.1 Olea europaea HOM05D007065 ORTHO05D008960 9.8e-68 260.0 131 100.0
Oeu049459.1 Olea europaea HOM05D007065 ORTHO05D008960 1.0e-40 170.2 110 80.0
MSTRG.20552 Avicennia marina HOM05D007065 ORTHO05D008960 4.9e-35 151.4 116 68.1
MSTRG.17000 Avicennia marina HOM05D007065 ORTHO05D008960 9.3e-34 147.1 115 67.8
Cc02_g30050 Coffea canephora HOM05D007065 ORTHO05D008960 1.0e-32 143.7 124 60.5
Solyc01g088140.3 Solanum lycopersicum HOM05D007065 ORTHO05D008960 1.5e-31 139.8 114 64.0
Sopen01g035020 Solanum pennellii HOM05D007065 ORTHO05D008960 2.5e-31 139.0 114 64.0
SGA_v2.0_scaffold4G02459 Striga asiatica HOM05D007065 ORTHO05D008960 4.3e-31 138.3 116 65.5
Psat5g211000 Pisum sativum HOM05D007065 ORTHO05D008960 6.2e-30 134.4 116 62.1
QL04p012215 Quercus lobata HOM05D007065 ORTHO05D008960 6.2e-30 134.4 119 63.0
MD07G1026200 Malus domestica HOM05D007065 ORTHO05D008960 1.1e-29 133.7 99 67.7
Peaxi162Scf01115g00011 Petunia axillaris HOM05D007065 ORTHO05D008960 2.4e-29 132.5 120 61.7
Migut.B01254 Erythranthe guttata HOM05D007065 ORTHO05D008960 4.0e-29 131.7 116 63.8
Dinv05022 Davidia involucrata HOM05D007065 ORTHO05D008960 5.3e-29 131.3 107 64.5
Phvul.005G034300 Phaseolus vulgaris HOM05D007065 ORTHO05D008960 9.0e-29 130.6 123 58.5
PGSC0003DMG400006766 Solanum tuberosum HOM05D007065 ORTHO05D008960 1.2e-28 130.2 114 61.4
MBI13_g15309_MAGBIO Magnolia biondii HOM05D007065 ORTHO05D008960 7.6e-28 127.5 99 66.7
Nn2g15140 Nelumbo nucifera HOM05D007065 ORTHO05D008960 1.3e-27 126.7 112 59.8
GSVIVG01001464001 Vitis vinifera HOM05D007065 ORTHO05D008960 2.9e-27 125.6 96 68.8
CiPaw.13G009300 Carya illinoinensis HOM05D007065 ORTHO05D008960 4.9e-27 124.8 109 65.1
Peaxi162Scf01115g00110 Petunia axillaris HOM05D007065 ORTHO05D008960 4.9e-27 124.8 114 61.4
Nitab4.5_0016351g0020 Nicotiana tabacum HOM05D007065 ORTHO05D008960 6.4e-27 124.4 106 64.2
PSO339G2565 Papaver somniferum HOM05D007065 ORTHO05D008960 6.4e-27 124.4 117 59.8
Lj3g0026300 Lotus japonicus HOM05D007065 ORTHO05D008960 8.4e-27 124.0 106 63.2
Glyma.11G157140 Glycine max HOM05D007065 ORTHO05D008960 1.1e-26 123.6 122 56.6
Nitab4.5_0000316g0330 Nicotiana tabacum HOM05D007065 ORTHO05D008960 1.1e-26 123.6 114 60.5
Aqoxy1G00221 Aquilegia oxysepala HOM05D007065 ORTHO05D008960 1.4e-26 123.2 99 61.6
Lalb_Chr04g0263741 Lupinus albus HOM05D007065 ORTHO05D008960 1.4e-26 123.2 97 63.9
Medtr3g436080 Medicago truncatula HOM05D007065 ORTHO05D008960 2.4e-26 122.5 118 57.6
PSO384G3763 Papaver somniferum HOM05D007065 ORTHO05D008960 5.5e-26 121.3 117 59.0
Ca_14187_v3 Cicer arietinum L. HOM05D007065 ORTHO05D008960 7.1e-26 120.9 112 58.0
Actinidia19434 Actinidia chinensis HOM05D007065 ORTHO05D008960 9.3e-26 120.6 108 60.2
MD02G1298000 Malus domestica HOM05D007065 ORTHO05D008960 1.2e-25 120.2 99 62.6
Sc10g0004180 Simmondsia chinensis HOM05D007065 ORTHO05D008960 1.2e-25 120.2 118 59.3
Hund13309 Selenicereus undatus HOM05D007065 ORTHO05D008960 2.7e-25 119.0 96 65.6
AUR62037250 Chenopodium quinoa HOM05D007065 ORTHO05D008960 7.9e-25 117.5 97 63.9
Manes.04G064100 Manihot esculenta HOM05D007065 ORTHO05D008960 1.0e-24 117.1 116 58.6
unitig_22.g5430 Utricularia gibba HOM05D007065 ORTHO05D008960 1.0e-24 117.1 102 62.7
CsaV3_5G024860 Cucumis sativus L. HOM05D007065 ORTHO05D008960 1.8e-24 116.3 118 57.6
ClCG01G007790 Citrullus lanatus HOM05D007065 ORTHO05D008960 3.0e-24 115.5 113 58.4
MELO3C005114.2 Cucumis melo HOM05D007065 ORTHO05D008960 3.0e-24 115.5 118 57.6
Eucgr.G03272 Eucalyptus grandis HOM05D007065 ORTHO05D008960 3.9e-24 115.2 98 63.3
Rhsim07G0061200 Rhododendron simsii HOM05D007065 ORTHO05D008960 5.1e-24 114.8 136 51.5
HanXRQChr01g0020971 Helianthus annuus HOM05D007065 ORTHO05D008960 1.1e-23 113.6 114 53.5
AUR62030541 Chenopodium quinoa HOM05D007065 ORTHO05D008960 1.5e-23 113.2 97 61.9
Lsat_1_v5_gn_1_99921 Lactuca sativa HOM05D007065 ORTHO05D008960 3.3e-23 112.1 114 50.9
ATR1134G106 Amborella trichopoda HOM05D007065 ORTHO05D008960 5.6e-23 111.3 96 62.5
EL10Ac2g02888 Beta vulgaris HOM05D007065 ORTHO05D008960 5.6e-23 111.3 121 54.5
Potri.003G203900 Populus trichocarpa HOM05D007065 ORTHO05D008960 7.4e-23 110.9 121 56.2
FvH4_7g02000 Fragaria vesca HOM05D007065 ORTHO05D008960 1.3e-22 110.2 117 53.8
FAN06G0835 Fragaria x ananassa HOM05D007065 ORTHO05D008960 1.3e-22 110.2 117 53.8
Sed0022285 Sechium edule HOM05D007065 ORTHO05D008960 1.6e-22 109.8 116 59.5
FAN01G0916 Fragaria x ananassa HOM05D007065 ORTHO05D008960 3.7e-22 108.6 96 60.4
THA.LOC104819111 Tarenaya hassleriana HOM05D007065 ORTHO05D008960 4.8e-22 108.2 114 55.3
SalBow5G3075 Salvia bowleyana HOM05D007065 ORTHO05D008960 8.1e-22 107.5 100 59.0
TAR636G1654 Trochodendron aralioides HOM05D007065 ORTHO05D008960 1.1e-21 107.1 108 57.4
Actinidia06280 Actinidia chinensis HOM05D007065 ORTHO05D008960 3.1e-21 105.5 108 56.5
Lj9P644T43 Lonicera japonica HOM05D007065 ORTHO05D008960 5.3e-21 104.8 110 56.4
SalBow5G0133 Salvia bowleyana HOM05D007065 ORTHO05D008960 5.3e-21 104.8 102 55.9
arahy.Tifrunner.gnm1.ann1.D1ESAM Arachis hypogaea HOM05D007065 ORTHO05D008960 6.9e-21 104.4 112 51.8
Aa31LG11G7640 Aethionema arabicum HOM05D007065 ORTHO05D008960 1.2e-20 103.6 100 54.0
Potri.001G020700 Populus trichocarpa HOM05D007065 ORTHO05D008960 1.2e-20 103.6 121 56.2
PGR031G2384 Punica granatum HOM05D007065 ORTHO05D008960 1.2e-20 103.6 122 48.4
CDE04G3117 Ceratophyllum demersum HOM05D007065 ORTHO05D008960 1.5e-20 103.2 115 49.6
RcHm_v2.0_Chr1g0318991 Rosa chinensis HOM05D007065 ORTHO05D008960 4.5e-20 101.7 121 48.8
Cfa010837 Carpinus fangiana HOM05D007065 ORTHO05D008960 5.8e-20 101.3 84 66.7
Carub.0006s1163 Capsella rubella HOM05D007065 ORTHO05D008960 7.6e-20 100.9 113 52.2
Duzib128G1478 Durio zibethinus HOM05D007065 ORTHO05D008960 1.3e-19 100.1 116 52.6
COL.COLO4_19334 Corchorus olitorius HOM05D002616 ORTHO05D003192 1.7e-19 99.8 114 55.3
Sabra01G0015300 Salix brachista HOM05D007065 ORTHO05D008960 1.7e-19 99.8 118 55.1
A10p24790 Brassica napus HOM05D007065 ORTHO05D008960 2.9e-19 99.0 120 51.7
Sp6g30550 Schrenkiella parvula HOM05D007065 ORTHO05D008960 2.9e-19 99.0 108 54.6
Thecc.10G002700 Theobroma cacao HOM05D007065 ORTHO05D008960 2.9e-19 99.0 105 56.2
C09p63610 Brassica napus HOM05D007065 ORTHO05D008960 3.8e-19 98.6 120 50.8
BolC9t59205H Brassica oleracea HOM05D007065 ORTHO05D008960 3.8e-19 98.6 120 50.8
arahy.Tifrunner.gnm1.ann1.ZUZF0V Arachis hypogaea HOM05D007065 ORTHO05D008960 4.9e-19 98.2 111 49.5
CDE07G0125 Ceratophyllum demersum HOM05D007065 ORTHO05D008960 4.9e-19 98.2 126 46.8
AL6G24090 Arabidopsis lyrata HOM05D007065 ORTHO05D008960 6.5e-19 97.8 101 54.5
DCAR_022363 Daucus carota HOM05D007065 ORTHO05D008960 6.5e-19 97.8 117 53.0
Ah.12g065220 Amaranthus hybridus HOM05D007065 ORTHO05D008960 1.1e-18 97.1 134 47.0
BraA10t44543Z Brassica rapa HOM05D007065 ORTHO05D008960 1.4e-18 96.7 120 50.8
ECA248G1453 Erigeron canadensis HOM05D007065 ORTHO05D008960 1.4e-18 96.7 102 52.0
VMungo1080G1068 Vigna mungo HOM05D007065 ORTHO05D008960 1.4e-18 96.7 81 63.0
Dinv32064 Davidia involucrata HOM05D007065 ORTHO05D008960 3.2e-18 95.5 100 55.0
AT5G13470 Arabidopsis thaliana HOM05D007065 ORTHO05D008960 1.2e-17 93.6 101 52.5
Duzib114G0680 Durio zibethinus HOM05D007065 ORTHO05D008960 1.2e-17 93.6 115 50.4
HPP92_001654 Vanilla planifolia HOM05D007065 ORTHO05D008960 4.6e-17 91.7 95 51.6
vmacro13712 Vaccinium macrocarpon HOM05D007065 ORTHO05D008960 6.0e-17 91.3 103 54.4
A02p01960 Brassica napus HOM05D007065 ORTHO05D008960 7.9e-17 90.9 113 52.2
BcaNung01150 Brassica carinata HOM05D007065 ORTHO05D008960 1.3e-16 90.1 113 51.3
TPR.G15470 Trifolium pratense HOM05D007065 ORTHO05D008960 3.9e-16 88.6 93 52.7
BcaNung01886 Brassica carinata HOM05D007065 ORTHO05D002715 5.1e-16 88.2 101 52.5
C02p06180 Brassica napus HOM05D007065 ORTHO05D008960 1.1e-15 87.0 113 50.4
BolC2t06559H Brassica oleracea HOM05D007065 ORTHO05D008960 1.1e-15 87.0 113 50.4
Cpa.g.sc197.20 Carica papaya HOM05D007065 ORTHO05D008960 1.1e-15 87.0 109 52.3
Hma1.2p1_0579F.1_g182650 Hydrangea macrophylla HOM05D007065 ORTHO05D008960 1.5e-15 86.7 84 57.1
FAN28G1096 Fragaria x ananassa HOM05D007065 ORTHO05D008960 1.9e-15 86.3 79 58.2
BraA02t05169Z Brassica rapa HOM05D007065 ORTHO05D008960 3.3e-15 85.5 113 50.4
Gohir.D13G013700 Gossypium hirsutum HOM05D007065 ORTHO05D008960 5.7e-15 84.7 102 49.0
FAN03G0341 Fragaria x ananassa HOM05D007065 ORTHO05D008960 4.8e-14 81.6 104 48.1
Haze_03101 Corylus avellana HOM05D007065 ORTHO05D008960 1.4e-13 80.1 70 64.3
TWI09G1481 Tripterygium wilfordii HOM05D007065 ORTHO05D008960 5.3e-13 78.2 118 44.1
Thecc.03G067800 Theobroma cacao HOM05D007065 ORTHO05D008960 9.0e-13 77.4 89 49.4
Thhalv10014938m.g Eutrema salsugineum HOM05D007065 ORTHO05D008960 1.2e-12 77.0 108 46.3
CSS0014876 Camellia sinensis var. sinensis HOM05D000388 ORTHO05D000473 4.5e-12 75.1 87 54.0
CANSAT80G2361 Cannabis sativa HOM05D007065 ORTHO05D008960 8.4e-11 70.9 59 66.1
Mapoly0014s0118 Marchantia polymorpha HOM05D007065 ORTHO05D008960 1.4e-10 70.1 106 43.4
AagrBONN_evm.TU.Sc2ySwM_228.825 Anthoceros agrestis HOM05D007065 ORTHO05D008960 1.8e-08 63.2 107 41.1
Os01g0939400 Oryza sativa ssp. japonica HOM05D007065 ORTHO05D008960 4.3e-07 58.5 97 39.2
CBR_g4751 Chara braunii HOM05D007065 ORTHO05D008960 5.7e-07 58.2 44 59.1
Zm00001eb141670 Zea mays HOM05D007065 ORTHO05D008960 3.7e-06 55.5 64 50.0
Gohir.A13G012500 Gossypium hirsutum HOM05D007065 ORTHO05D008960 4.8e-06 55.1 85 45.9
Gorai.013G014700 Gossypium raimondii HOM05D007065 ORTHO05D008960 6.3e-06 54.7 86 45.3


User provided reference genes

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