Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu027301.1 Olea europaea HOM05D004436 ORTHO05D005179 1.1e-95 353.2 173 100.0
Oeu047041.1 Olea europaea HOM05D004436 ORTHO05D005179 4.5e-36 155.2 153 56.2
Oeu044709.1 Olea europaea HOM05D004436 ORTHO05D005179 1.9e-34 149.8 146 55.5
MSTRG.22562 Avicennia marina HOM05D004436 ORTHO05D005179 4.8e-22 108.6 147 42.2
Actinidia32167 Actinidia chinensis HOM05D004436 ORTHO05D005179 2.0e-20 103.2 157 42.0
CSS0015890 Camellia sinensis var. sinensis HOM05D004436 ORTHO05D005179 2.0e-20 103.2 146 42.5
CSS0033207 Camellia sinensis var. sinensis HOM05D004436 ORTHO05D005179 2.0e-20 103.2 146 42.5
Actinidia21779 Actinidia chinensis HOM05D004436 ORTHO05D005179 2.2e-19 99.8 142 40.8
Nitab4.5_0000035g0090 Nicotiana tabacum HOM05D004436 ORTHO05D005179 5.0e-19 98.6 146 41.1
Nitab4.5_0012713g0010 Nicotiana tabacum HOM05D004436 ORTHO05D005179 8.5e-19 97.8 146 43.2
TAR375G0086 Trochodendron aralioides HOM05D004436 ORTHO05D005179 1.1e-18 97.4 153 40.5
DCAR_026403 Daucus carota HOM05D004436 ORTHO05D005179 1.9e-18 96.7 151 37.7
Peaxi162Scf00647g00219 Petunia axillaris HOM05D004436 ORTHO05D005179 6.1e-17 91.7 148 41.9
Peaxi162Scf00943g00014 Petunia axillaris HOM05D004436 ORTHO05D005179 8.0e-17 91.3 148 41.9
Dinv30366 Davidia involucrata HOM05D004436 ORTHO05D005179 1.0e-16 90.9 146 39.7
SGA_v2.0_scaffold68G22895 Striga asiatica HOM05D004436 ORTHO05D005179 1.4e-16 90.5 140 42.9
Solyc06g053330.4 Solanum lycopersicum HOM05D004436 ORTHO05D005179 1.8e-16 90.1 147 38.8
Sopen06g018390 Solanum pennellii HOM05D004436 ORTHO05D005179 1.8e-16 90.1 147 38.8
Dinv03512 Davidia involucrata HOM05D004436 ORTHO05D005179 4.0e-16 89.0 147 38.1
CAN.G540.4 Capsicum annuum HOM05D004436 ORTHO05D005179 6.8e-16 88.2 146 37.7
Rhsim08G0236100 Rhododendron simsii HOM05D004436 ORTHO05D005179 6.8e-16 88.2 152 38.2
Hma1.2p1_0496F.1_g166100 Hydrangea macrophylla HOM05D004436 ORTHO05D005179 8.8e-16 87.8 151 38.4
PGSC0003DMG400016304 Solanum tuberosum HOM05D004436 ORTHO05D005179 2.0e-15 86.7 147 38.1
GSVIVG01016817001 Vitis vinifera HOM05D004436 ORTHO05D005179 4.4e-15 85.5 141 39.0
Lsat_1_v5_gn_5_135221 Lactuca sativa HOM05D004436 ORTHO05D005179 7.5e-15 84.7 154 35.7
vmacro22224 Vaccinium macrocarpon HOM05D004436 ORTHO05D005179 9.8e-15 84.3 151 36.4
Lj5A40G74 Lonicera japonica HOM05D004436 ORTHO05D005179 2.2e-14 83.2 155 36.1
Migut.D00948 Erythranthe guttata HOM05D004436 ORTHO05D005179 4.8e-14 82.0 156 35.9
Manes.04G142200 Manihot esculenta HOM05D004436 ORTHO05D005179 1.1e-13 80.9 151 38.4
CiPaw.05G181900 Carya illinoinensis HOM05D004436 ORTHO05D005179 1.4e-13 80.5 139 36.7
ClCG09G000840 Citrullus lanatus HOM05D004436 ORTHO05D005179 5.4e-13 78.6 153 35.9
Ciclev10025597m.g Citrus clementina HOM05D004436 ORTHO05D005179 1.6e-12 77.0 154 31.8
Cpa.g.sc25.86 Carica papaya HOM05D004436 ORTHO05D005179 2.0e-12 76.6 144 36.1
MELO3C024372.2 Cucumis melo HOM05D004436 ORTHO05D005179 2.7e-12 76.3 135 38.5
Thecc.03G227200 Theobroma cacao HOM05D004436 ORTHO05D005179 2.7e-12 76.3 133 35.3
Atru.chr1.3808 Acer truncatum HOM05D004436 ORTHO05D005179 3.5e-12 75.9 150 34.0
CiPaw.01G221800 Carya illinoinensis HOM05D004436 ORTHO05D005179 5.9e-12 75.1 139 35.3
HanXRQChr10g0312341 Helianthus annuus HOM05D004436 ORTHO05D005179 7.7e-12 74.7 142 35.2
Duzib205G0267 Durio zibethinus HOM05D004436 ORTHO05D005179 1.0e-11 74.3 134 34.3
CsaV3_7G034640 Cucumis sativus L. HOM05D004436 ORTHO05D005179 2.2e-11 73.2 135 37.8
ECA234G4408 Erigeron canadensis HOM05D004436 ORTHO05D005179 3.8e-11 72.4 157 38.2
Eucgr.F03167 Eucalyptus grandis HOM05D004436 ORTHO05D005179 3.8e-11 72.4 135 34.8
Nn6g35749 Nelumbo nucifera HOM05D004436 ORTHO05D005179 5.0e-11 72.0 105 41.0
PGR119G1065 Punica granatum HOM05D004436 ORTHO05D005179 8.5e-11 71.2 136 36.0
COL.COLO4_30482 Corchorus olitorius HOM05D004436 ORTHO05D005179 1.5e-10 70.5 134 35.8
COL.COLO4_17027 Corchorus olitorius HOM05D004436 ORTHO05D005179 2.5e-10 69.7 134 35.1
PSO724G1089 Papaver somniferum HOM05D004436 ORTHO05D005179 2.5e-10 69.7 151 31.1
Sed0007780 Sechium edule HOM05D004436 ORTHO05D005179 2.5e-10 69.7 138 38.4
Cc04_g01610 Coffea canephora HOM05D004436 ORTHO05D005179 3.2e-10 69.3 129 38.8
PSO135G0558 Papaver somniferum HOM05D004436 ORTHO05D005179 4.2e-10 68.9 151 30.5
Prupe.3G044800 Prunus persica HOM05D004436 ORTHO05D005179 9.4e-10 67.8 139 34.5
THA.LOC104804933 Tarenaya hassleriana HOM05D004436 ORTHO05D005179 1.2e-09 67.4 138 36.2
THA.LOC104822769 Tarenaya hassleriana HOM05D004436 ORTHO05D005179 1.2e-09 67.4 136 34.6
Rhsim10G0150900 Rhododendron simsii HOM05D004436 ORTHO05D005179 1.6e-09 67.0 69 53.6
CDE07G0038 Ceratophyllum demersum HOM05D004436 ORTHO05D005179 2.7e-09 66.2 151 30.5
QL05p009436 Quercus lobata HOM05D004436 ORTHO05D005179 2.7e-09 66.2 134 33.6
MD17G1172300 Malus domestica HOM05D004436 ORTHO05D005179 3.6e-09 65.9 153 34.0
RcHm_v2.0_Chr2g0144531 Rosa chinensis HOM05D004436 ORTHO05D005179 4.7e-09 65.5 156 32.1
Sc12g0010440 Simmondsia chinensis HOM05D004436 ORTHO05D005179 1.0e-08 64.3 157 33.8
MD09G1187900 Malus domestica HOM05D004436 ORTHO05D005179 1.4e-08 63.9 137 34.3
Sabra01G0155800 Salix brachista HOM05D004436 ORTHO05D005179 1.4e-08 63.9 135 31.1
Potri.001G198600 Populus trichocarpa HOM05D004436 ORTHO05D005179 1.8e-08 63.5 138 32.6
HPP92_009424 Vanilla planifolia HOM05D004436 ORTHO05D005179 2.3e-08 63.2 49 57.1
Gohir.D03G171700 Gossypium hirsutum HOM05D004436 ORTHO05D005179 3.0e-08 62.8 133 31.6
ATR0185G001 Amborella trichopoda HOM05D004436 ORTHO05D005179 5.2e-08 62.0 91 39.6
ATR0762G049 Amborella trichopoda HOM05D004436 ORTHO05D005179 5.2e-08 62.0 91 39.6
Gohir.A03G000500 Gossypium hirsutum HOM05D004436 ORTHO05D005179 8.8e-08 61.2 133 31.6
Gorai.003G182300 Gossypium raimondii HOM05D004436 ORTHO05D005179 8.8e-08 61.2 133 31.6
Aa31LG8G1130 Aethionema arabicum HOM05D004436 ORTHO05D005179 1.5e-07 60.5 142 33.1
FvH4_6g47280 Fragaria vesca HOM05D004436 ORTHO05D005179 2.6e-07 59.7 138 34.1
Lj6g0016044 Lotus japonicus HOM05D004436 ORTHO05D005179 2.6e-07 59.7 140 32.9
BcaC09g48383 Brassica carinata HOM05D004436 ORTHO05D005179 3.4e-07 59.3 152 30.3
A01p39710 Brassica napus HOM05D004436 ORTHO05D005179 3.4e-07 59.3 152 30.3
C01p50660 Brassica napus HOM05D004436 ORTHO05D005179 3.4e-07 59.3 152 30.3
BolC1t05015H Brassica oleracea HOM05D004436 ORTHO05D005179 3.4e-07 59.3 152 30.3
BraA01t04010Z Brassica rapa HOM05D004436 ORTHO05D005179 3.4e-07 59.3 152 30.3
Manes.11G023100 Manihot esculenta HOM05D004436 ORTHO05D005179 3.4e-07 59.3 153 28.8
Hund20819 Selenicereus undatus HOM05D004436 ORTHO05D005179 3.4e-07 59.3 147 30.6
Thhalv10020760m.g Eutrema salsugineum HOM05D004436 ORTHO05D005179 4.4e-07 58.9 141 30.5
Sp3g12180 Schrenkiella parvula HOM05D004436 ORTHO05D005179 5.7e-07 58.5 143 30.1
Sed0020704 Sechium edule HOM05D004436 ORTHO05D005179 5.7e-07 58.5 153 32.7
TWI23G0436 Tripterygium wilfordii HOM05D004436 ORTHO05D005179 7.5e-07 58.2 160 30.0
RcHm_v2.0_Chr2g0166351 Rosa chinensis HOM05D004436 ORTHO05D005179 9.8e-07 57.8 153 31.4
THA.LOC104822775 Tarenaya hassleriana HOM05D004436 ORTHO05D005179 1.7e-06 57.0 49 53.1
CANSAT56G1493 Cannabis sativa HOM05D004436 ORTHO05D005179 2.2e-06 56.6 50 54.0
Lalb_Chr08g0233321 Lupinus albus HOM05D004436 ORTHO05D005179 2.2e-06 56.6 126 32.5
Glyma.15G165300 Glycine max HOM05D004436 ORTHO05D005179 2.8e-06 56.2 139 27.3
FAN02G3564 Fragaria x ananassa HOM05D004436 ORTHO05D005179 3.7e-06 55.8 137 32.1
FAN09G2135 Fragaria x ananassa HOM05D004436 ORTHO05D005179 4.9e-06 55.5 137 32.1
Haze_15997 Corylus avellana HOM05D004436 ORTHO05D005179 8.3e-06 54.7 97 39.2


User provided reference genes

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