Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu027253.1 Olea europaea HOM05D004286 ORTHO05D005038 1.2e-77 293.1 148 100.0
Oeu036755.1 Olea europaea HOM05D004286 ORTHO05D005038 2.9e-60 235.3 146 80.8
Actinidia37025 Actinidia chinensis HOM05D004286 ORTHO05D005038 2.1e-42 176.0 149 65.1
MSTRG.14122 Avicennia marina HOM05D004286 ORTHO05D005038 2.1e-42 176.0 150 64.7
Dinv08705 Davidia involucrata HOM05D004286 ORTHO05D005038 2.3e-41 172.6 150 64.0
CSS0008732 Camellia sinensis var. sinensis HOM05D004286 ORTHO05D005038 8.9e-41 170.6 150 62.0
Manes.12G056500 Manihot esculenta HOM05D004286 ORTHO05D005038 1.2e-40 170.2 147 62.6
CSS0002248 Camellia sinensis var. sinensis HOM05D004286 ORTHO05D005038 4.4e-40 168.3 149 62.4
CSS0046465 Camellia sinensis var. sinensis HOM05D004286 ORTHO05D005038 4.4e-40 168.3 149 62.4
CSS0020066 Camellia sinensis var. sinensis HOM05D004286 ORTHO05D005038 7.5e-40 167.5 150 61.3
Dinv05857 Davidia involucrata HOM05D004286 ORTHO05D005038 7.5e-40 167.5 152 61.8
SalBow7G3654 Salvia bowleyana HOM05D004286 ORTHO05D005038 2.8e-39 165.6 149 59.1
SGA_v2.0_scaffold49G18364 Striga asiatica HOM05D004286 ORTHO05D005038 3.7e-39 165.2 150 62.0
Actinidia10792 Actinidia chinensis HOM05D004286 ORTHO05D005038 4.9e-39 164.9 150 62.7
TWI18G0815 Tripterygium wilfordii HOM05D004286 ORTHO05D005038 1.1e-38 163.7 150 62.7
vmacro09373 Vaccinium macrocarpon HOM05D004286 ORTHO05D005038 1.1e-38 163.7 150 62.7
Duzib133G0743 Durio zibethinus HOM05D004286 ORTHO05D005038 3.1e-38 162.2 151 57.6
Nitab4.5_0011973g0010 Nicotiana tabacum HOM05D004286 ORTHO05D005038 3.1e-38 162.2 151 62.3
Migut.H01256 Erythranthe guttata HOM05D004286 ORTHO05D005038 2.7e-37 159.1 147 59.9
CiPaw.04G192800 Carya illinoinensis HOM05D004286 ORTHO05D005038 5.9e-37 157.9 150 60.7
Nitab4.5_0000130g0020 Nicotiana tabacum HOM05D004286 ORTHO05D005038 7.8e-37 157.5 151 61.6
DCAR_019737 Daucus carota HOM05D004286 ORTHO05D005038 1.3e-36 156.8 124 64.5
Duzib138G1090 Durio zibethinus HOM05D004286 ORTHO05D005038 1.3e-36 156.8 151 55.6
Hma1.2p1_0133F.1_g060820 Hydrangea macrophylla HOM05D004286 ORTHO05D005038 1.3e-36 156.8 150 57.3
MD09G1117100 Malus domestica HOM05D004286 ORTHO05D005038 1.3e-36 156.8 150 58.0
TAR720G0001 Trochodendron aralioides HOM05D004286 ORTHO05D005038 1.3e-36 156.8 149 58.4
COL.COLO4_32785 Corchorus olitorius HOM05D004286 ORTHO05D005038 1.7e-36 156.4 153 56.2
Glyma.02G266300 Glycine max HOM05D004286 ORTHO05D005038 2.9e-36 155.6 149 58.4
Rhsim04G0046600 Rhododendron simsii HOM05D004286 ORTHO05D005038 3.8e-36 155.2 151 60.3
QL08p029923 Quercus lobata HOM05D004286 ORTHO05D005038 5.0e-36 154.8 150 60.0
TAR629G1098 Trochodendron aralioides HOM05D004286 ORTHO05D005038 5.0e-36 154.8 149 59.1
Cfa014297 Carpinus fangiana HOM05D004286 ORTHO05D005038 8.6e-36 154.1 151 58.3
VMungo0647G2550 Vigna mungo HOM05D004286 ORTHO05D005038 1.5e-35 153.3 150 59.3
SalBow1G6481 Salvia bowleyana HOM05D004286 ORTHO05D005038 1.9e-35 152.9 152 59.2
Thecc.01G185000 Theobroma cacao HOM05D004286 ORTHO05D005038 1.9e-35 152.9 150 56.7
Hma1.2p1_0405F.1_g145600 Hydrangea macrophylla HOM05D004286 ORTHO05D005038 2.5e-35 152.5 150 59.3
Nn1g03342 Nelumbo nucifera HOM05D004286 ORTHO05D005038 3.3e-35 152.1 149 57.7
TWI36G0011 Tripterygium wilfordii HOM05D004286 ORTHO05D005038 3.3e-35 152.1 150 61.3
MD17G1108600 Malus domestica HOM05D004286 ORTHO05D005038 4.3e-35 151.8 150 56.0
CANSAT64G2404 Cannabis sativa HOM05D004286 ORTHO05D005038 5.6e-35 151.4 150 56.7
GSVIVG01030535001 Vitis vinifera HOM05D004286 ORTHO05D005038 7.3e-35 151.0 150 56.7
FAN05G2579 Fragaria x ananassa HOM05D004286 ORTHO05D005038 9.5e-35 150.6 149 55.7
Atru.chr6.3279 Acer truncatum HOM05D004286 ORTHO05D005038 1.6e-34 149.8 150 57.3
Sopen07g024750 Solanum pennellii HOM05D004286 ORTHO05D005038 2.8e-34 149.1 142 60.6
Gohir.D11G158900 Gossypium hirsutum HOM05D004286 ORTHO05D005038 3.6e-34 148.7 153 54.2
Gorai.007G169300 Gossypium raimondii HOM05D004286 ORTHO05D005038 3.6e-34 148.7 153 54.2
Phvul.008G215800 Phaseolus vulgaris HOM05D004286 ORTHO05D005038 3.6e-34 148.7 150 56.7
Peaxi162Scf00921g00259 Petunia axillaris HOM05D004286 ORTHO05D005038 4.7e-34 148.3 148 59.5
Solyc07g049410.3 Solanum lycopersicum HOM05D004286 ORTHO05D005038 6.1e-34 147.9 142 59.9
Potri.014G160500 Populus trichocarpa HOM05D004286 ORTHO05D005038 8.0e-34 147.5 148 57.4
Prupe.3G206700 Prunus persica HOM05D004286 ORTHO05D005038 8.0e-34 147.5 151 56.3
Sabra14G0122200 Salix brachista HOM05D004286 ORTHO05D005038 8.0e-34 147.5 148 57.4
CiPaw.03G274200 Carya illinoinensis HOM05D004286 ORTHO05D005038 1.0e-33 147.1 150 56.7
ClCG09G020850 Citrullus lanatus HOM05D004286 ORTHO05D005038 1.0e-33 147.1 150 55.3
FvH4_6g41790 Fragaria vesca HOM05D004286 ORTHO05D005038 1.0e-33 147.1 149 55.0
FAN14G2365 Fragaria x ananassa HOM05D004286 ORTHO05D005038 1.0e-33 147.1 149 55.0
Sed0025216 Sechium edule HOM05D004286 ORTHO05D005038 1.4e-33 146.7 144 57.6
Lalb_Chr17g0347121 Lupinus albus HOM05D004286 ORTHO05D005038 1.8e-33 146.4 150 58.7
Glyma.14G051200 Glycine max HOM05D004286 ORTHO05D005038 2.3e-33 146.0 150 56.7
Atru.chr6.3295 Acer truncatum HOM05D004286 ORTHO05D005038 4.0e-33 145.2 150 56.7
FAN02G2924 Fragaria x ananassa HOM05D004286 ORTHO05D005038 4.0e-33 145.2 149 53.7
Gohir.A11G151900 Gossypium hirsutum HOM05D004286 ORTHO05D005038 4.0e-33 145.2 153 52.9
Nitab4.5_0000622g0120 Nicotiana tabacum HOM05D004286 ORTHO05D005038 5.2e-33 144.8 151 57.0
RcHm_v2.0_Chr2g0157611 Rosa chinensis HOM05D004286 ORTHO05D005038 8.9e-33 144.1 150 54.0
Nitab4.5_0008424g0030 Nicotiana tabacum HOM05D004286 ORTHO05D005038 1.2e-32 143.7 151 56.3
PGSC0003DMG400000662 Solanum tuberosum HOM05D004286 ORTHO05D005038 1.2e-32 143.7 125 62.4
Peaxi162Scf00047g02033 Petunia axillaris HOM05D004286 ORTHO05D005038 2.0e-32 142.9 141 57.4
Gorai.001G218300 Gossypium raimondii HOM05D004286 ORTHO05D005038 2.6e-32 142.5 150 52.7
CsaV3_6G037850 Cucumis sativus L. HOM05D004286 ORTHO05D005038 3.4e-32 142.1 150 54.7
Psat2g027200 Pisum sativum HOM05D004286 ORTHO05D005038 4.4e-32 141.7 153 56.9
FAN09G0399 Fragaria x ananassa HOM05D004286 ORTHO05D005038 9.8e-32 140.6 149 53.7
arahy.Tifrunner.gnm1.ann1.0TG0LH Arachis hypogaea HOM05D004286 ORTHO05D005038 1.3e-31 140.2 150 55.3
Aqoxy1G04129 Aquilegia oxysepala HOM05D004286 ORTHO05D005038 2.2e-31 139.4 148 54.7
Nn1g07346 Nelumbo nucifera HOM05D004286 ORTHO05D005038 2.2e-31 139.4 149 54.4
Sed0019287 Sechium edule HOM05D004286 ORTHO05D005038 2.2e-31 139.4 135 56.3
arahy.Tifrunner.gnm1.ann1.6KAU0S Arachis hypogaea HOM05D004286 ORTHO05D005038 2.9e-31 139.0 150 54.7
Gohir.D07G195100 Gossypium hirsutum HOM05D004286 ORTHO05D005038 2.9e-31 139.0 150 52.0
Manes.13G064900 Manihot esculenta HOM05D004286 ORTHO05D005038 3.7e-31 138.7 147 54.4
Gohir.D07G090500 Gossypium hirsutum HOM05D004286 ORTHO05D005038 8.3e-31 137.5 153 51.0
LjContig00029g0014825 Lotus japonicus HOM05D004286 ORTHO05D005038 8.3e-31 137.5 117 63.2
PGR042G3878 Punica granatum HOM05D004286 ORTHO05D005038 8.3e-31 137.5 150 52.7
PGSC0003DMG400013901 Solanum tuberosum HOM05D004286 ORTHO05D005038 8.3e-31 137.5 151 55.6
THA.LOC104808865 Tarenaya hassleriana HOM05D004286 ORTHO05D005038 2.4e-30 136.0 149 50.3
Lalb_Chr04g0250221 Lupinus albus HOM05D004286 ORTHO05D005038 3.2e-30 135.6 150 54.7
MBI19_g29436_MAGBIO Magnolia biondii HOM05D004286 ORTHO05D005038 4.1e-30 135.2 149 55.7
Hund02277 Selenicereus undatus HOM05D004286 ORTHO05D005038 4.1e-30 135.2 131 61.8
Thhalv10002646m.g Eutrema salsugineum HOM05D004286 ORTHO05D005038 5.4e-30 134.8 130 54.6
Gorai.001G097000 Gossypium raimondii HOM05D004286 ORTHO05D005038 9.2e-30 134.0 153 50.3
BcaC01g03195 Brassica carinata HOM05D004286 ORTHO05D005038 1.2e-29 133.7 129 53.5
Lalb_Chr10g0105501 Lupinus albus HOM05D004286 ORTHO05D005038 1.6e-29 133.3 150 53.3
Ciclev10016185m.g Citrus clementina HOM05D004286 ORTHO05D005038 2.0e-29 132.9 161 53.4
Gohir.A07G085000 Gossypium hirsutum HOM05D004286 ORTHO05D005038 2.0e-29 132.9 153 49.7
Lj1A785T54 Lonicera japonica HOM05D004286 ORTHO05D005038 4.6e-29 131.7 173 46.2
Medtr5g084720 Medicago truncatula HOM05D004286 ORTHO05D005038 4.6e-29 131.7 150 52.0
MELO3C014446.2 Cucumis melo HOM05D004286 ORTHO05D005038 6.0e-29 131.3 144 52.8
Sopen12g001960 Solanum pennellii HOM05D004286 ORTHO05D005038 7.8e-29 131.0 140 52.9
BcaB08g34482 Brassica carinata HOM05D004286 ORTHO05D005038 1.0e-28 130.6 128 52.3
Sc06g0009720 Simmondsia chinensis HOM05D004286 ORTHO05D005038 1.0e-28 130.6 148 50.0
TPR.G17665 Trifolium pratense HOM05D004286 ORTHO05D005038 3.0e-28 129.0 147 50.3
BcaC06g35879 Brassica carinata HOM05D004286 ORTHO05D005038 3.9e-28 128.6 127 51.2
SalBow3G3416 Salvia bowleyana HOM05D004286 ORTHO05D005038 3.9e-28 128.6 203 43.8
Solyc12g005990.2 Solanum lycopersicum HOM05D004286 ORTHO05D005038 8.6e-28 127.5 147 52.4
CAN.G931.5 Capsicum annuum HOM05D004286 ORTHO05D005038 1.1e-27 127.1 151 51.0
Eucgr.K00729 Eucalyptus grandis HOM05D004286 ORTHO05D005038 1.1e-27 127.1 150 52.0
AT2G04550 Arabidopsis thaliana HOM05D004286 ORTHO05D005038 4.3e-27 125.2 128 52.3
BcaB06g26820 Brassica carinata HOM05D004286 ORTHO05D005038 5.6e-27 124.8 129 51.9
EL10Ac9g22806 Beta vulgaris HOM05D004286 ORTHO05D005038 7.3e-27 124.4 117 61.5
Lsat_1_v5_gn_5_124900 Lactuca sativa HOM05D004286 ORTHO05D005038 9.5e-27 124.0 149 47.0
Aa31sc76G40 Aethionema arabicum HOM05D004286 ORTHO05D005038 1.2e-26 123.6 127 49.6
CDE04G0112 Ceratophyllum demersum HOM05D004286 ORTHO05D005038 1.6e-26 123.2 147 51.7
AUR62017569 Chenopodium quinoa HOM05D004286 ORTHO05D005038 1.6e-26 123.2 129 52.7
Ca_06046_v3 Cicer arietinum L. HOM05D004286 ORTHO05D005038 1.6e-26 123.2 150 49.3
PSO675G0968 Papaver somniferum HOM05D004286 ORTHO05D005038 2.1e-26 122.9 149 49.0
ATR1101G050 Amborella trichopoda HOM05D004286 ORTHO05D005038 3.6e-26 122.1 119 57.1
Carub.0003s2618 Capsella rubella HOM05D004286 ORTHO05D005038 3.6e-26 122.1 129 50.4
Haze_12745 Corylus avellana HOM05D004286 ORTHO05D005038 3.6e-26 122.1 151 53.0
AL3G42190 Arabidopsis lyrata HOM05D004286 ORTHO05D005038 4.7e-26 121.7 128 50.8
PSO541G3581 Papaver somniferum HOM05D004286 ORTHO05D005038 1.1e-25 120.6 149 47.7
CDE07G0175 Ceratophyllum demersum HOM05D004286 ORTHO05D005038 2.3e-25 119.4 115 58.3
CARHR102480 Cardamine hirsuta HOM05D004286 ORTHO05D005038 4.0e-25 118.6 129 48.8
Os02g0720300 Oryza sativa ssp. japonica HOM05D004286 ORTHO05D005038 5.2e-25 118.2 149 48.3
Sp3g23330 Schrenkiella parvula HOM05D004286 ORTHO05D005038 5.2e-25 118.2 131 48.9
ECA234G1505 Erigeron canadensis HOM05D004286 ORTHO05D005038 8.9e-25 117.5 150 44.7
Cpa.g.sc132.48 Carica papaya HOM05D004286 ORTHO05D005038 1.5e-24 116.7 177 42.9
Gohir.A07G188500 Gossypium hirsutum HOM05D004286 ORTHO05D005038 1.5e-24 116.7 146 46.6
Os06g0308100 Oryza sativa ssp. japonica HOM05D004286 ORTHO05D005038 2.0e-24 116.3 149 45.6
PGR142G1675 Punica granatum HOM05D004286 ORTHO05D005038 7.5e-24 114.4 129 48.1
AUR62015106 Chenopodium quinoa HOM05D004286 ORTHO05D005038 1.3e-23 113.6 125 50.4
Hund24189 Selenicereus undatus HOM05D004286 ORTHO05D005038 1.3e-23 113.6 143 47.6
HanXRQChr10g0306281 Helianthus annuus HOM05D004286 ORTHO05D005038 1.7e-23 113.2 151 45.7
unitig_52.g17329 Utricularia gibba HOM05D004286 ORTHO05D005038 2.9e-23 112.5 105 55.2
HanXRQChr12g0374401 Helianthus annuus HOM05D004286 ORTHO05D005038 1.9e-22 109.8 152 43.4
A03p44390 Brassica napus HOM05D004286 ORTHO05D005038 6.0e-21 104.8 129 47.3
C03p55010 Brassica napus HOM05D004286 ORTHO05D005038 6.0e-21 104.8 129 47.3
BolC3t17776H Brassica oleracea HOM05D004286 ORTHO05D005038 6.0e-21 104.8 129 47.3
BraA03t13569Z Brassica rapa HOM05D004286 ORTHO05D005038 6.0e-21 104.8 129 47.3
Zm00001eb252940 Zea mays HOM05D004286 ORTHO05D005038 1.7e-20 103.2 147 43.5
Mapoly0033s0037 Marchantia polymorpha HOM05D004286 ORTHO05D005038 6.6e-20 101.3 116 43.1
BolC7t41460H Brassica oleracea HOM05D004286 ORTHO05D005038 5.6e-19 98.2 127 44.9
C07p10150 Brassica napus HOM05D004286 ORTHO05D005038 7.3e-19 97.8 127 44.9
Pp3c15_23940 Physcomitrium patens HOM05D004286 ORTHO05D005038 1.2e-18 97.1 133 41.4
A07p06680 Brassica napus HOM05D004286 ORTHO05D005038 1.6e-18 96.7 127 43.3
SEGI_04616 Sequoiadendron giganteum HOM05D004286 ORTHO05D005038 1.6e-18 96.7 118 44.9
BraA07t28459Z Brassica rapa HOM05D004286 ORTHO05D005038 2.8e-18 95.9 127 44.1
HPP92_021917 Vanilla planifolia HOM05D000528 ORTHO05D000999 3.6e-18 95.5 122 48.4
Aqoxy6G01617 Aquilegia oxysepala HOM05D004286 ORTHO05D005038 6.2e-18 94.7 84 58.3
AagrBONN_evm.TU.Sc2ySwM_344.1469 Anthoceros agrestis HOM05D004286 ORTHO05D005038 8.1e-18 94.4 155 45.8
Pp3c9_24360 Physcomitrium patens HOM05D004286 ORTHO05D005038 8.1e-18 94.4 133 41.4
Ah.01g001820 Amaranthus hybridus HOM05D004286 ORTHO05D005038 1.4e-17 93.6 129 47.3
TAR624G0201 Trochodendron aralioides HOM05D004286 ORTHO05D005038 5.2e-17 91.7 84 56.0
CBR_g21813 Chara braunii HOM05D004286 ORTHO05D005038 8.3e-15 84.3 140 35.7
CARHR217010 Cardamine hirsuta HOM05D004286 ORTHO05D005038 1.9e-14 83.2 59 61.0
Sp7g10870 Schrenkiella parvula HOM05D004286 ORTHO05D005038 2.1e-13 79.7 59 54.2
Thhalv10005655m.g Eutrema salsugineum HOM05D004286 ORTHO05D005038 6.6e-12 74.7 59 54.2
Cre03.g193350 Chlamydomonas reinhardtii HOM05D004286 ORTHO05D005038 1.1e-11 73.9 127 34.6
SMO118G0241 Selaginella moellendorffii HOM05D004286 ORTHO05D005038 1.1e-09 67.4 39 71.8
Duzib211G0639 Durio zibethinus HOM05D004286 ORTHO05D005038 3.1e-09 65.9 38 76.3
Aqoxy6G01222 Aquilegia oxysepala HOM05D004286 ORTHO05D005038 4.0e-09 65.5 42 73.8
Gohir.A10G195100 Gossypium hirsutum HOM05D005353 ORTHO05D006248 4.4e-08 62.0 36 72.2
Gohir.A11G099350 Gossypium hirsutum HOM05D004286 ORTHO05D005038 8.4e-07 57.8 31 80.6
Carub.0003s2384 Capsella rubella HOM05D001370 ORTHO05D004632 7.1e-06 54.7 61 47.5


User provided reference genes

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