Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu027152.1 Olea europaea HOM05D003565 ORTHO05D003943 1.8e-73 279.3 147 100.0
Oeu027151.1 Olea europaea HOM05D003565 ORTHO05D003943 1.9e-56 222.6 146 78.1
Migut.N02472 Erythranthe guttata HOM05D003565 ORTHO05D003943 1.9e-27 126.3 151 49.7
Dinv29764 Davidia involucrata HOM05D003565 ORTHO05D003943 6.1e-26 121.3 154 47.4
Hma1.2p1_1807F.1_g303350 Hydrangea macrophylla HOM05D003565 ORTHO05D003943 4.0e-25 118.6 151 49.0
SGA_v2.0_scaffold177G39437 Striga asiatica HOM05D003565 ORTHO05D003943 6.8e-25 117.9 147 49.0
Actinidia28386 Actinidia chinensis HOM05D003565 ORTHO05D003943 1.5e-24 116.7 156 44.9
GSVIVG01035140001 Vitis vinifera HOM05D003565 ORTHO05D003943 5.7e-24 114.8 152 45.4
COL.COLO4_13836 Corchorus olitorius HOM05D003565 ORTHO05D003943 1.7e-23 113.2 164 42.7
Cfa015405 Carpinus fangiana HOM05D003565 ORTHO05D003943 2.4e-22 109.4 152 46.1
Oeu064291.1 Olea europaea HOM05D003565 ORTHO05D003943 2.4e-22 109.4 165 42.4
Peaxi162Scf00246g01219 Petunia axillaris HOM05D003565 ORTHO05D003943 5.4e-22 108.2 152 44.1
SalBow2G0621 Salvia bowleyana HOM05D003565 ORTHO05D003943 9.1e-22 107.5 123 48.0
Thecc.04G287000 Theobroma cacao HOM05D003565 ORTHO05D003943 9.1e-22 107.5 157 41.4
CAN.G261.3 Capsicum annuum HOM05D003565 ORTHO05D003943 1.6e-21 106.7 152 45.4
Potri.010G012400 Populus trichocarpa HOM05D003565 ORTHO05D003943 1.6e-21 106.7 156 43.6
MBI18_g24867_MAGBIO Magnolia biondii HOM05D003565 ORTHO05D003943 2.7e-21 105.9 154 43.5
CiPaw.02G081400 Carya illinoinensis HOM05D003565 ORTHO05D003943 3.5e-21 105.5 150 42.7
CiPaw.02G081500 Carya illinoinensis HOM05D003565 ORTHO05D003943 3.5e-21 105.5 150 42.7
Sed0004032 Sechium edule HOM05D003565 ORTHO05D003943 4.5e-21 105.1 158 39.9
Solyc01g066680.3 Solanum lycopersicum HOM05D003565 ORTHO05D003943 4.5e-21 105.1 153 41.8
Cpa.g.sc16.191 Carica papaya HOM05D003565 ORTHO05D003943 1.3e-20 103.6 155 41.9
CiPaw.02G081300 Carya illinoinensis HOM05D003565 ORTHO05D003943 2.3e-20 102.8 147 42.9
MSTRG.10106 Avicennia marina HOM05D003565 ORTHO05D003943 2.9e-20 102.4 154 46.1
PGR004G2879 Punica granatum HOM05D003565 ORTHO05D003943 2.9e-20 102.4 121 45.5
Sabra10G0007900 Salix brachista HOM05D003565 ORTHO05D003943 2.9e-20 102.4 156 43.6
AL3G29580 Arabidopsis lyrata HOM05D003565 ORTHO05D003943 3.8e-20 102.1 121 43.8
CSS0008161 Camellia sinensis var. sinensis HOM05D003565 ORTHO05D003943 3.8e-20 102.1 155 41.9
CANSAT78G1552 Cannabis sativa HOM05D003565 ORTHO05D003943 3.8e-20 102.1 155 43.2
Sopen01g028300 Solanum pennellii HOM05D003565 ORTHO05D003943 3.8e-20 102.1 152 39.5
Gorai.011G191400 Gossypium raimondii HOM05D003565 ORTHO05D003943 8.6e-20 100.9 154 44.8
Carub.0003s1639 Capsella rubella HOM05D003565 ORTHO05D003943 1.1e-19 100.5 121 41.3
PSO210G5566 Papaver somniferum HOM05D003565 ORTHO05D003943 1.1e-19 100.5 148 44.6
PGSC0003DMG400011334 Solanum tuberosum HOM05D003565 ORTHO05D003943 1.1e-19 100.5 152 40.8
SGA_v2.0_scaffold18G08345 Striga asiatica HOM05D003565 ORTHO05D003943 1.1e-19 100.5 159 42.1
Migut.O00777 Erythranthe guttata HOM05D003565 ORTHO05D003943 1.5e-19 100.1 157 44.6
AT3G16660 Arabidopsis thaliana HOM05D003565 ORTHO05D003943 1.9e-19 99.8 121 42.1
SalBow2G2654 Salvia bowleyana HOM05D003565 ORTHO05D003943 1.9e-19 99.8 156 43.6
Duzib151G1023 Durio zibethinus HOM05D003565 ORTHO05D003943 2.5e-19 99.4 157 41.4
PGR004G0277 Punica granatum HOM05D003565 ORTHO05D003943 3.3e-19 99.0 153 39.2
HanXRQChr13g0420001 Helianthus annuus HOM05D003565 ORTHO05D003943 4.2e-19 98.6 152 44.1
Actinidia14291 Actinidia chinensis HOM05D003565 ORTHO05D003943 5.5e-19 98.2 148 43.2
Gohir.A10G165200 Gossypium hirsutum HOM05D003565 ORTHO05D003943 7.2e-19 97.8 154 40.3
PGR004G2171 Punica granatum HOM05D003565 ORTHO05D003943 7.2e-19 97.8 153 39.2
vmacro15222 Vaccinium macrocarpon HOM05D003565 ORTHO05D003943 9.5e-19 97.4 153 39.9
ECA240G0767 Erigeron canadensis HOM05D003565 ORTHO05D003943 1.2e-18 97.1 151 40.4
Gohir.D10G171300 Gossypium hirsutum HOM05D003565 ORTHO05D003943 1.2e-18 97.1 154 44.8
Haze_01182 Corylus avellana HOM05D003565 ORTHO05D003943 2.1e-18 96.3 154 42.9
PSO832G2395 Papaver somniferum HOM05D003565 ORTHO05D003943 2.1e-18 96.3 148 43.9
DCAR_027062 Daucus carota HOM05D003565 ORTHO05D003943 2.8e-18 95.9 155 39.4
DCAR_027064 Daucus carota HOM05D003565 ORTHO05D003943 2.8e-18 95.9 155 39.4
MD00G1127800 Malus domestica HOM05D003565 ORTHO05D003943 3.6e-18 95.5 159 43.4
Nitab4.5_0000513g0180 Nicotiana tabacum HOM05D003565 ORTHO05D003943 6.1e-18 94.7 157 42.0
Prupe.1G133700 Prunus persica HOM05D003565 ORTHO05D003943 1.0e-17 94.0 155 41.3
AT3G16670 Arabidopsis thaliana HOM05D003565 ORTHO05D003943 1.4e-17 93.6 143 40.6
RcHm_v2.0_Chr4g0422991 Rosa chinensis HOM05D003565 ORTHO05D003943 1.4e-17 93.6 124 43.5
CARHR091910 Cardamine hirsuta HOM05D003565 ORTHO05D003943 1.8e-17 93.2 118 43.2
Lsat_1_v5_gn_6_95321 Lactuca sativa HOM05D003565 ORTHO05D003943 1.8e-17 93.2 154 40.3
Nitab4.5_0005362g0030 Nicotiana tabacum HOM05D003565 ORTHO05D003943 4.0e-17 92.0 153 41.8
ClCG05G006170 Citrullus lanatus HOM05D003565 ORTHO05D003943 6.8e-17 91.3 153 37.3
Carub.0003s1640 Capsella rubella HOM05D003565 ORTHO05D003943 8.9e-17 90.9 140 45.0
Rhsim02G0008000 Rhododendron simsii HOM05D003565 ORTHO05D003943 8.9e-17 90.9 155 38.1
CsaV3_3G014750 Cucumis sativus L. HOM05D003565 ORTHO05D003943 1.2e-16 90.5 158 39.2
AL3G29590 Arabidopsis lyrata HOM05D003565 ORTHO05D003943 2.0e-16 89.7 143 38.5
Cfa021269 Carpinus fangiana HOM05D003565 ORTHO05D003943 2.6e-16 89.4 156 38.5
FAN17G2113 Fragaria x ananassa HOM05D003565 ORTHO05D003943 3.4e-16 89.0 153 38.6
THA.LOC104820292 Tarenaya hassleriana HOM05D003565 ORTHO05D003943 7.5e-16 87.8 143 37.1
TAR362G0267 Trochodendron aralioides HOM05D003565 ORTHO05D003943 7.5e-16 87.8 154 39.0
Cc03_g01690 Coffea canephora HOM05D003565 ORTHO05D003943 9.8e-16 87.4 154 39.0
Glyma.09G043500 Glycine max HOM05D003565 ORTHO05D003943 1.7e-15 86.7 156 38.5
Lalb_Chr15g0083411 Lupinus albus HOM05D003565 ORTHO05D003943 1.7e-15 86.7 154 40.9
Prupe.1G133600 Prunus persica HOM05D003565 ORTHO05D003943 1.7e-15 86.7 157 37.6
Ciclev10006885m.g Citrus clementina HOM05D003565 ORTHO05D003943 2.2e-15 86.3 152 39.5
MELO3C035189.2 Cucumis melo HOM05D003565 ORTHO05D003943 2.8e-15 85.9 152 38.8
PGR004G2038 Punica granatum HOM05D003565 ORTHO05D003943 2.8e-15 85.9 155 37.4
Carub.0002s1293 Capsella rubella HOM05D003565 ORTHO05D003943 3.7e-15 85.5 141 44.7
MELO3C006673.2 Cucumis melo HOM05D003565 ORTHO05D003943 3.7e-15 85.5 155 37.4
Lj6g0014140 Lotus japonicus HOM05D003565 ORTHO05D003943 3.7e-15 85.5 150 38.0
CiPaw.02G059200 Carya illinoinensis HOM05D003565 ORTHO05D003943 4.9e-15 85.1 150 39.3
FvH4_4g18480 Fragaria vesca HOM05D003565 ORTHO05D003943 4.9e-15 85.1 154 37.0
FAN12G1574 Fragaria x ananassa HOM05D003565 ORTHO05D003943 4.9e-15 85.1 154 37.0
FAN12G0358 Fragaria x ananassa HOM05D003565 ORTHO05D003943 6.3e-15 84.7 154 37.0
TWI09G1223 Tripterygium wilfordii HOM05D003565 ORTHO05D003943 8.3e-15 84.3 155 39.4
CiPaw.02G081600 Carya illinoinensis HOM05D003565 ORTHO05D003943 1.1e-14 84.0 118 43.2
HPP92_006917 Vanilla planifolia HOM05D003565 ORTHO05D003943 1.4e-14 83.6 148 37.8
HanXRQChr03g0089351 Helianthus annuus HOM05D003565 ORTHO05D003943 1.8e-14 83.2 154 35.7
CiPaw.02G059300 Carya illinoinensis HOM05D003565 ORTHO05D003943 3.1e-14 82.4 136 41.9
Ciclev10006409m.g Citrus clementina HOM05D003565 ORTHO05D003943 4.1e-14 82.0 139 43.2
Nitab4.5_0000194g0060 Nicotiana tabacum HOM05D003565 ORTHO05D003943 4.1e-14 82.0 135 43.0
Cfa015408 Carpinus fangiana HOM05D003565 ORTHO05D003943 5.4e-14 81.6 150 38.0
BcaC09g48620 Brassica carinata HOM05D003565 ORTHO05D003943 7.0e-14 81.3 120 42.5
CiPaw.02G058900 Carya illinoinensis HOM05D003565 ORTHO05D003943 7.0e-14 81.3 153 36.6
CsaV3_6G023960 Cucumis sativus L. HOM05D000549 ORTHO05D001527 7.0e-14 81.3 115 45.2
CsaV3_UNG044240 Cucumis sativus L. HOM05D003565 ORTHO05D003943 7.0e-14 81.3 115 42.6
FAN12G0988 Fragaria x ananassa HOM05D003565 ORTHO05D003943 1.2e-13 80.5 102 47.1
CsaV3_6G024110 Cucumis sativus L. HOM05D000549 ORTHO05D003943 1.6e-13 80.1 115 44.3
Aa31LG8G3780 Aethionema arabicum HOM05D003565 ORTHO05D003943 2.7e-13 79.3 120 38.3
FAN17G0998 Fragaria x ananassa HOM05D003565 ORTHO05D003943 2.7e-13 79.3 146 35.6
QL06p009817 Quercus lobata HOM05D003565 ORTHO05D003943 2.7e-13 79.3 149 34.9
CSS0017850 Camellia sinensis var. sinensis HOM05D003565 ORTHO05D003943 4.5e-13 78.6 155 35.5
FvH4_4g18430 Fragaria vesca HOM05D003565 ORTHO05D003943 5.9e-13 78.2 102 47.1
FAN12G2280 Fragaria x ananassa HOM05D003565 ORTHO05D003943 5.9e-13 78.2 102 47.1
CARHR150150 Cardamine hirsuta HOM05D003565 ORTHO05D003943 7.8e-13 77.8 135 34.1
HanXRQChr08g0214531 Helianthus annuus HOM05D003565 ORTHO05D003943 1.0e-12 77.4 151 36.4
Medtr2g436350 Medicago truncatula HOM05D003565 ORTHO05D003943 1.3e-12 77.0 155 36.1
HanXRQChr03g0088811 Helianthus annuus HOM05D003565 ORTHO05D003943 1.7e-12 76.6 130 39.2
DCAR_027061 Daucus carota HOM05D003565 ORTHO05D003943 2.9e-12 75.9 118 45.8
Sed0026730 Sechium edule HOM05D003565 ORTHO05D003943 2.9e-12 75.9 123 35.0
Oeu026321.1 Olea europaea HOM05D003565 ORTHO05D003943 5.0e-12 75.1 121 39.7
HanXRQChr03g0088801 Helianthus annuus HOM05D003565 ORTHO05D003943 6.6e-12 74.7 149 36.2
CARHR091930 Cardamine hirsuta HOM05D003565 ORTHO05D003943 8.6e-12 74.3 143 35.0
CARHR091920 Cardamine hirsuta HOM05D003565 ORTHO05D003943 1.1e-11 73.9 138 35.5
CARHR150160 Cardamine hirsuta HOM05D003565 ORTHO05D003943 1.1e-11 73.9 143 35.0
Phvul.009G249400 Phaseolus vulgaris HOM05D003565 ORTHO05D003943 1.1e-11 73.9 154 33.8
Psat1g155160 Pisum sativum HOM05D003565 ORTHO05D003943 2.5e-11 72.8 154 37.0
VMungo1309G1767 Vigna mungo HOM05D003565 ORTHO05D003943 3.3e-11 72.4 121 34.7
HanXRQChr08g0214541 Helianthus annuus HOM05D003565 ORTHO05D003943 4.3e-11 72.0 142 38.0
Nitab4.5_0003949g0030 Nicotiana tabacum HOM05D003565 ORTHO05D003943 4.3e-11 72.0 128 39.8
QL93p0060_0003 Quercus lobata HOM05D003565 ORTHO05D003943 4.3e-11 72.0 149 38.9
QL06p009717 Quercus lobata HOM05D003565 ORTHO05D003943 5.6e-11 71.6 149 38.3
QL06p009778 Quercus lobata HOM05D003565 ORTHO05D003943 5.6e-11 71.6 149 38.9
QL93p0060_0027 Quercus lobata HOM05D003565 ORTHO05D003943 5.6e-11 71.6 149 38.9
QL06p009754 Quercus lobata HOM05D003565 ORTHO05D003943 7.3e-11 71.2 147 37.4
QL06p009790 Quercus lobata HOM05D003565 ORTHO05D003943 7.3e-11 71.2 147 37.4
ATR0796G036 Amborella trichopoda HOM05D003565 ORTHO05D003943 9.5e-11 70.9 154 36.4
TPR.G31280 Trifolium pratense HOM05D003565 ORTHO05D003943 1.2e-10 70.5 122 38.5
QL06p009664 Quercus lobata HOM05D003565 ORTHO05D003943 2.1e-10 69.7 128 40.6
Nitab4.5_0003949g0040 Nicotiana tabacum HOM05D003565 ORTHO05D003943 4.7e-10 68.6 128 39.1
Thhalv10021522m.g Eutrema salsugineum HOM05D003565 ORTHO05D003943 6.1e-10 68.2 123 35.8
BcaB04g20866 Brassica carinata HOM05D003565 ORTHO05D003943 8.0e-10 67.8 126 33.3
A01p37210 Brassica napus HOM05D003565 ORTHO05D003943 8.0e-10 67.8 123 34.1
Nitab4.5_0000493g0100 Nicotiana tabacum HOM05D003565 ORTHO05D003943 8.0e-10 67.8 125 39.2
QL06p009701 Quercus lobata HOM05D003565 ORTHO05D003943 8.0e-10 67.8 147 36.7
QL93p0060_0019 Quercus lobata HOM05D003565 ORTHO05D003943 8.0e-10 67.8 147 36.7
QL06p009739 Quercus lobata HOM05D003565 ORTHO05D003943 1.4e-09 67.0 147 36.7
HanXRQChr03g0089401 Helianthus annuus HOM05D003565 ORTHO05D003943 1.8e-09 66.6 141 36.9
QL06p009796 Quercus lobata HOM05D003565 ORTHO05D003943 1.8e-09 66.6 107 43.0
ECA247G1649 Erigeron canadensis HOM05D023078 ORTHO05D003943 2.3e-09 66.2 141 37.6
Nitab4.5_0000194g0050 Nicotiana tabacum HOM05D003565 ORTHO05D003943 2.3e-09 66.2 101 42.6
A01p37230 Brassica napus HOM05D003565 ORTHO05D003943 3.1e-09 65.9 123 33.3
QL93p0060_0047 Quercus lobata HOM05D003565 ORTHO05D003943 4.0e-09 65.5 147 36.1
QL06p009725 Quercus lobata HOM05D003565 ORTHO05D003943 5.2e-09 65.1 107 43.0
RcHm_v2.0_Chr4g0422901 Rosa chinensis HOM05D003565 ORTHO05D003943 4.4e-08 62.0 117 35.0
HanXRQChr01g0002181 Helianthus annuus HOM05D003565 ORTHO05D003943 7.5e-08 61.2 144 35.4
BcaB04g18928 Brassica carinata HOM05D003565 ORTHO05D003943 9.8e-08 60.8 107 38.3
A03p40060 Brassica napus HOM05D003565 ORTHO05D003943 9.8e-08 60.8 152 28.9
BraA01t03781Z Brassica rapa HOM05D003565 ORTHO05D003943 9.8e-08 60.8 127 32.3
Thhalv10021613m.g Eutrema salsugineum HOM05D003565 ORTHO05D003943 9.8e-08 60.8 115 33.9
BraA03t13156Z Brassica rapa HOM05D003565 ORTHO05D003943 1.3e-07 60.5 152 28.3
BraA01t03783Z Brassica rapa HOM05D003565 ORTHO05D003943 2.2e-07 59.7 127 32.3
HanXRQChr05g0130321 Helianthus annuus HOM05D003565 ORTHO05D003943 3.7e-07 58.9 150 34.0
Nitab4.5_0000930g0010 Nicotiana tabacum HOM05D003565 ORTHO05D003943 3.7e-07 58.9 148 35.1
Os07g0674500 Oryza sativa ssp. japonica HOM05D003565 ORTHO05D003943 6.4e-07 58.2 142 35.2
BcaC09g48665 Brassica carinata HOM05D003565 ORTHO05D003943 8.3e-07 57.8 127 31.5
C01p47150 Brassica napus HOM05D003565 ORTHO05D003943 8.3e-07 57.8 127 31.5
Hma1.2p1_0078F.1_g040470 Hydrangea macrophylla HOM05D003565 ORTHO05D003943 8.3e-07 57.8 151 33.8
arahy.Tifrunner.gnm1.ann1.Q570SP Arachis hypogaea HOM05D003565 ORTHO05D003943 1.1e-06 57.4 142 33.1
DCAR_030515 Daucus carota HOM05D003565 ORTHO05D003943 1.4e-06 57.0 161 31.1
Nitab4.5_0000493g0090 Nicotiana tabacum HOM05D003565 ORTHO05D003943 2.4e-06 56.2 80 45.0
arahy.Tifrunner.gnm1.ann1.VE1P60 Arachis hypogaea HOM05D003565 ORTHO05D003943 4.1e-06 55.5 89 41.6
Zm00001eb016410 Zea mays HOM05D003565 ORTHO05D003943 4.1e-06 55.5 107 39.3


User provided reference genes

Program Settings