Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu027136.1 Olea europaea HOM05D005660 ORTHO05D006954 1.9e-84 315.8 166 100.0
Oeu016162.1 Olea europaea HOM05D005660 ORTHO05D006954 1.5e-73 279.6 164 89.6
PGSC0003DMG400004073 Solanum tuberosum HOM05D005660 ORTHO05D006954 4.6e-62 241.5 171 71.9
Nitab4.5_0000410g0170 Nicotiana tabacum HOM05D005660 ORTHO05D006954 1.3e-61 240.0 168 73.8
Peaxi162Scf00015g00624 Petunia axillaris HOM05D005660 ORTHO05D006954 1.1e-60 236.9 169 72.2
CAN.G438.109 Capsicum annuum HOM05D005660 ORTHO05D006954 2.1e-59 232.6 177 68.9
Lj5C141T17 Lonicera japonica HOM05D005660 ORTHO05D006954 4.7e-59 231.5 167 69.5
Dinv36893 Davidia involucrata HOM05D005660 ORTHO05D006954 8.1e-59 230.7 164 71.3
Cc04_g07620 Coffea canephora HOM05D005660 ORTHO05D006954 1.8e-58 229.6 164 70.1
Solyc03g119840.3 Solanum lycopersicum HOM05D005660 ORTHO05D006954 3.1e-58 228.8 173 68.2
Sopen06g026530 Solanum pennellii HOM05D005660 ORTHO05D006954 5.2e-58 228.0 169 70.4
SalBow2G0395 Salvia bowleyana HOM05D005660 ORTHO05D006954 6.8e-58 227.6 161 75.2
Nitab4.5_0003716g0100 Nicotiana tabacum HOM05D005660 ORTHO05D006954 1.2e-57 226.9 168 69.6
MSTRG.9561 Avicennia marina HOM05D005660 ORTHO05D006954 7.6e-57 224.2 160 72.5
Atru.chr9.733 Acer truncatum HOM05D005660 ORTHO05D006954 1.9e-55 219.5 171 68.4
Cpa.g.c34045 Carica papaya HOM05D005660 ORTHO05D006954 1.9e-55 219.5 169 68.0
QL10p023157 Quercus lobata HOM05D005660 ORTHO05D006954 2.4e-55 219.2 171 67.8
CSS0007003 Camellia sinensis var. sinensis HOM05D005660 ORTHO05D006954 4.2e-55 218.4 166 68.7
ECA247G3454 Erigeron canadensis HOM05D005660 ORTHO05D006954 4.2e-55 218.4 172 70.3
Nitab4.5_0010134g0010 Nicotiana tabacum HOM05D005660 ORTHO05D006954 5.4e-55 218.0 168 67.9
Migut.K00381 Erythranthe guttata HOM05D005660 ORTHO05D006954 9.3e-55 217.2 162 70.4
Thecc.03G027100 Theobroma cacao HOM05D005660 ORTHO05D006954 2.1e-54 216.1 171 66.1
Cfa019836 Carpinus fangiana HOM05D005660 ORTHO05D006954 2.7e-54 215.7 168 65.5
DCAR_011337 Daucus carota HOM05D005660 ORTHO05D006954 2.7e-54 215.7 167 68.9
Lsat_1_v5_gn_1_15860 Lactuca sativa HOM05D005660 ORTHO05D006954 6.0e-54 214.5 171 65.5
Duzib068G0469 Durio zibethinus HOM05D005660 ORTHO05D006954 1.0e-53 213.8 176 64.2
Nitab4.5_0001432g0090 Nicotiana tabacum HOM05D005660 ORTHO05D006954 1.0e-53 213.8 177 66.1
Actinidia31034 Actinidia chinensis HOM05D005660 ORTHO05D009563 1.7e-53 213.0 166 66.3
Actinidia39803 Actinidia chinensis HOM05D005660 ORTHO05D006954 3.9e-53 211.8 166 66.9
COL.COLO4_38430 Corchorus olitorius HOM05D005660 ORTHO05D006954 3.9e-53 211.8 171 64.9
Sed0025711 Sechium edule HOM05D005660 ORTHO05D006954 5.1e-53 211.5 173 64.2
HanXRQChr02g0042751 Helianthus annuus HOM05D005660 ORTHO05D006954 8.7e-53 210.7 171 66.7
Prupe.5G216100 Prunus persica HOM05D005660 ORTHO05D006954 1.1e-52 210.3 176 64.2
PGR083G1435 Punica granatum HOM05D005660 ORTHO05D006954 1.1e-52 210.3 180 62.8
Gohir.A12G265100 Gossypium hirsutum HOM05D005660 ORTHO05D006954 1.9e-52 209.5 173 64.7
Glyma.05G014100 Glycine max HOM05D005660 ORTHO05D006954 3.3e-52 208.8 167 64.7
Lalb_Chr07g0178541 Lupinus albus HOM05D005660 ORTHO05D006954 5.6e-52 208.0 169 65.1
Potri.012G059100 Populus trichocarpa HOM05D005660 ORTHO05D006954 5.6e-52 208.0 171 66.1
MD06G1209900 Malus domestica HOM05D005660 ORTHO05D006954 7.3e-52 207.6 182 61.5
RcHm_v2.0_Chr7g0184421 Rosa chinensis HOM05D005660 ORTHO05D006954 7.3e-52 207.6 176 64.2
CiPaw.16G083200 Carya illinoinensis HOM05D005660 ORTHO05D006954 9.6e-52 207.2 176 63.6
FvH4_5g12810 Fragaria vesca HOM05D005660 ORTHO05D006954 1.3e-51 206.8 177 65.0
Gohir.D12G265300 Gossypium hirsutum HOM05D005660 ORTHO05D006954 1.3e-51 206.8 173 63.6
FAN18G2100 Fragaria x ananassa HOM05D005660 ORTHO05D006954 1.6e-51 206.5 177 64.4
Haze_18589 Corylus avellana HOM05D005660 ORTHO05D006954 2.1e-51 206.1 178 60.7
CANSAT80G1116 Cannabis sativa HOM05D005660 ORTHO05D006954 2.8e-51 205.7 172 62.8
FAN08G1036 Fragaria x ananassa HOM05D005660 ORTHO05D006954 3.6e-51 205.3 177 64.4
FAN18G0270 Fragaria x ananassa HOM05D005660 ORTHO05D006954 3.6e-51 205.3 177 63.8
Haze_18590 Corylus avellana HOM05D005660 ORTHO05D006954 4.8e-51 204.9 178 60.1
Manes.01G021600 Manihot esculenta HOM05D005660 ORTHO05D006954 4.8e-51 204.9 171 65.5
MD14G1220800 Malus domestica HOM05D005660 ORTHO05D006954 6.2e-51 204.5 183 61.2
Nn3g17686 Nelumbo nucifera HOM05D005660 ORTHO05D006954 6.2e-51 204.5 163 63.8
vmacro17684 Vaccinium macrocarpon HOM05D005660 ORTHO05D006954 8.1e-51 204.1 163 65.0
HanXRQChr04g0105941 Helianthus annuus HOM05D005660 ORTHO05D006954 1.1e-50 203.8 166 65.7
TAR629G1816 Trochodendron aralioides HOM05D005660 ORTHO05D006954 1.4e-50 203.4 159 66.0
Glyma.17G122400 Glycine max HOM05D005660 ORTHO05D006954 1.8e-50 203.0 167 63.5
arahy.Tifrunner.gnm1.ann1.18T8HP Arachis hypogaea HOM05D005660 ORTHO05D006954 2.4e-50 202.6 173 63.6
arahy.Tifrunner.gnm1.ann1.IPQJ9D Arachis hypogaea HOM05D005660 ORTHO05D006954 2.4e-50 202.6 173 60.1
arahy.Tifrunner.gnm1.ann1.K4DBIV Arachis hypogaea HOM05D005660 ORTHO05D006954 4.0e-50 201.8 173 63.6
Ciclev10022237m.g Citrus clementina HOM05D005660 ORTHO05D006954 6.9e-50 201.1 171 58.5
Lj4g0015648 Lotus japonicus HOM05D005660 ORTHO05D006954 9.0e-50 200.7 169 61.5
Lj1g0000047 Lotus japonicus HOM05D005660 ORTHO05D006954 1.2e-49 200.3 169 60.4
Medtr2g055760 Medicago truncatula HOM05D005660 ORTHO05D006954 2.0e-49 199.5 173 60.7
VMungo1309G1625 Vigna mungo HOM05D005660 ORTHO05D006954 2.0e-49 199.5 171 62.6
Glyma.04G145600 Glycine max HOM05D005660 ORTHO05D006954 2.6e-49 199.1 172 62.2
Manes.05G117900 Manihot esculenta HOM05D005660 ORTHO05D006954 2.6e-49 199.1 170 62.9
CsaV3_1G006460 Cucumis sativus L. HOM05D005660 ORTHO05D006954 3.4e-49 198.7 174 60.3
Glyma.06G209600 Glycine max HOM05D005660 ORTHO05D006954 5.8e-49 198.0 171 62.0
TWI81G0064 Tripterygium wilfordii HOM05D005660 ORTHO05D006954 5.8e-49 198.0 172 61.6
Phvul.003G178300 Phaseolus vulgaris HOM05D005660 ORTHO05D006954 1.3e-48 196.8 184 59.2
arahy.Tifrunner.gnm1.ann1.YK8N2P Arachis hypogaea HOM05D005660 ORTHO05D006954 1.7e-48 196.4 173 59.0
Eucgr.B00688 Eucalyptus grandis HOM05D005660 ORTHO05D006954 2.2e-48 196.1 171 59.1
Gorai.008G285000 Gossypium raimondii HOM05D005660 ORTHO05D006954 4.9e-48 194.9 206 54.9
Ca_02656_v3 Cicer arietinum L. HOM05D005660 ORTHO05D006954 6.4e-48 194.5 172 61.0
MELO3C002072.2 Cucumis melo HOM05D005660 ORTHO05D006954 8.4e-48 194.1 175 58.3
Aqoxy3G03878 Aquilegia oxysepala HOM05D005660 ORTHO05D006954 1.4e-47 193.4 164 61.6
Hund09993 Selenicereus undatus HOM05D005660 ORTHO05D006954 6.0e-46 188.0 184 58.7
TPR.G27758 Trifolium pratense HOM05D005660 ORTHO05D006954 1.7e-45 186.4 175 57.7
Peaxi162Scf00013g00938 Petunia axillaris HOM05D005660 ORTHO05D006954 4.3e-44 181.8 164 58.5
Sed0025679 Sechium edule HOM05D005660 ORTHO05D006954 5.6e-44 181.4 176 56.2
AUR62032180 Chenopodium quinoa HOM05D005660 ORTHO05D006954 9.6e-44 180.6 182 53.3
BcaB04g17376 Brassica carinata HOM05D005660 ORTHO05D006954 2.8e-43 179.1 175 56.0
EL10Ac5g11240 Beta vulgaris HOM05D005660 ORTHO05D006954 6.2e-43 177.9 178 51.7
Psat1g025680 Pisum sativum HOM05D005660 ORTHO05D006954 6.2e-43 177.9 173 56.1
TAR622G0544 Trochodendron aralioides HOM05D005660 ORTHO05D006954 6.2e-43 177.9 137 63.5
CiPaw.15G125200 Carya illinoinensis HOM05D005660 ORTHO05D006954 8.1e-43 177.6 188 56.4
CAN.G587.76 Capsicum annuum HOM05D005660 ORTHO05D006954 1.1e-42 177.2 115 74.8
PSO063G2916 Papaver somniferum HOM05D005660 ORTHO05D006954 1.4e-42 176.8 175 57.7
BcaC07g37091 Brassica carinata HOM05D005660 ORTHO05D006954 1.8e-42 176.4 176 55.1
C08p04550 Brassica napus HOM05D005660 ORTHO05D006954 1.8e-42 176.4 176 55.1
BolC8t47259H Brassica oleracea HOM05D005660 ORTHO05D006954 1.8e-42 176.4 176 55.1
A08p04280 Brassica napus HOM05D005660 ORTHO05D006954 2.4e-42 176.0 177 54.8
BraA06t23613Z Brassica rapa HOM05D005660 ORTHO05D006954 3.1e-42 175.6 177 54.2
Thhalv10011768m.g Eutrema salsugineum HOM05D005660 ORTHO05D006954 5.3e-42 174.9 177 55.4
AL1G55790 Arabidopsis lyrata HOM05D005660 ORTHO05D006954 6.9e-42 174.5 178 54.5
BcaC08g43100 Brassica carinata HOM05D005660 ORTHO05D006954 9.0e-42 174.1 177 54.2
BcaNung05017 Brassica carinata HOM05D005660 ORTHO05D006954 9.0e-42 174.1 177 54.2
C06p03690 Brassica napus HOM05D005660 ORTHO05D006954 9.0e-42 174.1 177 54.2
BolC6t35508H Brassica oleracea HOM05D005660 ORTHO05D006954 9.0e-42 174.1 177 54.2
Carub.0001s3813 Capsella rubella HOM05D005660 ORTHO05D006954 9.0e-42 174.1 178 55.6
AT1G48960 Arabidopsis thaliana HOM05D005660 ORTHO05D006954 1.2e-41 173.7 178 55.1
A06p04080 Brassica napus HOM05D005660 ORTHO05D006954 1.5e-41 173.3 177 53.7
CARHR038970 Cardamine hirsuta HOM05D005660 ORTHO05D006954 1.5e-41 173.3 180 55.6
Sp1g35870 Schrenkiella parvula HOM05D005660 ORTHO05D006954 2.0e-41 172.9 176 54.5
PSO782G0127 Papaver somniferum HOM05D005660 ORTHO05D006954 9.9e-41 170.6 175 56.0
Rhsim08G0138400 Rhododendron simsii HOM05D005660 ORTHO05D006954 1.3e-40 170.2 123 69.9
Ah.11g047200 Amaranthus hybridus HOM05D005660 ORTHO05D006954 4.9e-40 168.3 189 51.3
Cpa.g.sc13.65 Carica papaya HOM05D005660 ORTHO05D006954 6.4e-40 167.9 115 73.0
Aa31LG10G4970 Aethionema arabicum HOM05D005660 ORTHO05D006954 3.2e-39 165.6 167 53.9
Sabra12G0040900 Salix brachista HOM05D005660 ORTHO05D006954 5.4e-39 164.9 117 72.6
Duzib084G1344 Durio zibethinus HOM05D005660 ORTHO05D006954 9.3e-39 164.1 117 69.2
BraA08t32455Z Brassica rapa HOM05D005660 ORTHO05D006954 7.9e-38 161.0 177 52.0
VMungo1215G2351 Vigna mungo HOM05D005660 ORTHO05D006954 7.9e-38 161.0 252 42.5
MBI16_g23748_MAGBIO Magnolia biondii HOM05D005660 ORTHO05D006954 1.3e-37 160.2 160 53.8
Lalb_Chr13g0302411 Lupinus albus HOM05D005660 ORTHO05D006954 6.7e-37 157.9 115 68.7
Nn4g23692 Nelumbo nucifera HOM05D005660 ORTHO05D006954 1.1e-34 150.6 110 69.1
Sc12g0006810 Simmondsia chinensis HOM05D005660 ORTHO05D006954 1.8e-34 149.8 154 52.6
THA.LOC104820410 Tarenaya hassleriana HOM05D005660 ORTHO05D006954 6.9e-34 147.9 206 45.1
AUR62036940 Chenopodium quinoa HOM05D005660 ORTHO05D006954 9.0e-34 147.5 120 63.3
ATR0598G023 Amborella trichopoda HOM05D005660 ORTHO05D006954 2.9e-32 142.5 152 52.6
GSVIVG01008223001 Vitis vinifera HOM05D005660 ORTHO05D006954 8.4e-32 141.0 164 49.4
HPP92_011590 Vanilla planifolia HOM05D005660 ORTHO05D006954 3.2e-31 139.0 139 51.8
Zm00001eb126330 Zea mays HOM05D005660 ORTHO05D006954 6.9e-26 121.3 116 55.2
SEGI_40774 Sequoiadendron giganteum HOM05D005660 ORTHO05D006954 3.4e-25 119.0 149 47.7
ClCG04G011310 Citrullus lanatus HOM05D005660 ORTHO05D006954 3.5e-22 109.0 102 56.9
PGSC0003DMG400005618 Solanum tuberosum HOM05D005660 ORTHO05D006954 1.8e-21 106.7 78 71.8
AagrBONN_evm.TU.Sc2ySwM_362.1267 Anthoceros agrestis HOM05D005660 ORTHO05D006954 5.1e-21 105.1 157 38.9
Phvul.009G201000 Phaseolus vulgaris HOM05D005660 ORTHO05D006954 3.7e-19 99.0 99 55.6
Sopen03g038700 Solanum pennellii HOM05D005660 ORTHO05D006954 1.1e-18 97.4 74 70.3
FAN13G2173 Fragaria x ananassa HOM05D005660 ORTHO05D006954 4.1e-18 95.5 100 61.0
CDE07G0562 Ceratophyllum demersum HOM05D005660 ORTHO05D006954 4.2e-15 85.5 126 38.9
Solyc06g069270.1 Solanum lycopersicum HOM05D005660 ORTHO05D006954 9.4e-15 84.3 57 70.2
Medtr5g047050 Medicago truncatula HOM05D001012 ORTHO05D002597 2.6e-09 66.2 149 32.9
TPR.G38561 Trifolium pratense HOM05D001012 ORTHO05D002597 3.4e-09 65.9 148 32.4
Lj2g0027117 Lotus japonicus HOM05D001012 ORTHO05D002597 4.5e-09 65.5 152 34.2
RcHm_v2.0_Chr5g0042351 Rosa chinensis HOM05D005660 ORTHO05D006954 4.5e-09 65.5 44 68.2
RcHm_v2.0_Chr4g0434591 Rosa chinensis HOM05D005660 ORTHO05D006954 5.9e-09 65.1 43 69.8
Ca_05056_v3 Cicer arietinum L. HOM05D001012 ORTHO05D002597 1.7e-08 63.5 117 34.2
Lalb_Chr10g0099111 Lupinus albus HOM05D001012 ORTHO05D002597 1.7e-08 63.5 120 32.5
Psat2g093600 Pisum sativum HOM05D001012 ORTHO05D002597 2.2e-08 63.2 146 31.5
arahy.Tifrunner.gnm1.ann1.QD4C18 Arachis hypogaea HOM05D001012 ORTHO05D002597 5.0e-08 62.0 118 34.7
arahy.Tifrunner.gnm1.ann1.WE17ZA Arachis hypogaea HOM05D001012 ORTHO05D002597 5.0e-08 62.0 118 34.7
Glyma.02G121800 Glycine max HOM05D001012 ORTHO05D002597 5.0e-08 62.0 119 32.8
Manes.01G025500 Manihot esculenta HOM05D001012 ORTHO05D002597 5.0e-08 62.0 147 31.3
PSO782G1087 Papaver somniferum HOM05D001012 ORTHO05D002597 5.0e-08 62.0 116 32.8
MELO3C012161.2 Cucumis melo HOM05D001012 ORTHO05D002597 1.4e-07 60.5 117 37.6
Phvul.003G038900 Phaseolus vulgaris HOM05D001012 ORTHO05D002597 1.9e-07 60.1 119 33.6
Lalb_Chr17g0341401 Lupinus albus HOM05D001012 ORTHO05D002597 2.5e-07 59.7 118 33.9
Sabra10G0108300 Salix brachista HOM05D001012 ORTHO05D002597 2.5e-07 59.7 147 33.3
Ah.03g138680 Amaranthus hybridus HOM05D001012 ORTHO05D002597 3.2e-07 59.3 119 34.5
Potri.010G140200 Populus trichocarpa HOM05D001012 ORTHO05D002597 4.2e-07 58.9 149 34.2
VMungo1215G3431 Vigna mungo HOM05D001012 ORTHO05D002597 4.2e-07 58.9 122 35.2
Cpa.g.sc1.163 Carica papaya HOM05D001012 ORTHO05D002597 7.2e-07 58.2 150 32.0
Peaxi162Scf00175g00919 Petunia axillaris HOM05D001012 ORTHO05D002597 9.4e-07 57.8 120 35.0
Sed0023361 Sechium edule HOM05D001012 ORTHO05D002597 9.4e-07 57.8 148 32.4
ClCG00G003260 Citrullus lanatus HOM05D001012 ORTHO05D002597 1.2e-06 57.4 117 34.2
ClCG05G023590 Citrullus lanatus HOM05D001012 ORTHO05D002597 1.2e-06 57.4 117 34.2
PSO063G0991 Papaver somniferum HOM05D001012 ORTHO05D002597 1.2e-06 57.4 121 32.2
Lalb_Chr13g0302711 Lupinus albus HOM05D001012 ORTHO05D002597 1.6e-06 57.0 114 31.6
Manes.05G111800 Manihot esculenta HOM05D001012 ORTHO05D002597 1.6e-06 57.0 144 31.2
Solyc05g012000.3 Solanum lycopersicum HOM05D001012 ORTHO05D002597 1.6e-06 57.0 116 31.9
Aqoxy3G03718 Aquilegia oxysepala HOM05D001012 ORTHO05D002597 2.1e-06 56.6 120 31.7
FvH4_4g29580 Fragaria vesca HOM05D001012 ORTHO05D002597 2.1e-06 56.6 119 36.1
FAN12G4325 Fragaria x ananassa HOM05D001012 ORTHO05D002597 2.1e-06 56.6 119 36.1
Sabra08G0082700 Salix brachista HOM05D001012 ORTHO05D002597 2.1e-06 56.6 148 34.5
Medtr4g109880 Medicago truncatula HOM05D001012 ORTHO05D002597 2.7e-06 56.2 114 32.5
Sopen05g006750 Solanum pennellii HOM05D001012 ORTHO05D002597 2.7e-06 56.2 120 34.2
TWI81G0138 Tripterygium wilfordii HOM05D001012 ORTHO05D002597 2.7e-06 56.2 117 30.8
EL10Ac6g14697 Beta vulgaris HOM05D001012 ORTHO05D002597 4.7e-06 55.5 125 34.4
Dinv20144 Davidia involucrata HOM05D001012 ORTHO05D002597 4.7e-06 55.5 144 29.2
Actinidia04803 Actinidia chinensis HOM05D001012 ORTHO05D002597 6.1e-06 55.1 116 33.6
Aqoxy3G00542 Aquilegia oxysepala HOM05D001012 ORTHO05D002597 6.1e-06 55.1 145 28.3
FAN22G1093 Fragaria x ananassa HOM05D001012 ORTHO05D002597 6.1e-06 55.1 117 35.9
PGR119G0423 Punica granatum HOM05D001012 ORTHO05D002597 6.1e-06 55.1 117 32.5
TWI31G0760 Tripterygium wilfordii HOM05D001012 ORTHO05D002597 6.1e-06 55.1 121 33.1
CDE10G0510 Ceratophyllum demersum HOM05D001012 ORTHO05D002597 7.9e-06 54.7 117 29.1
Phvul.003G182600 Phaseolus vulgaris HOM05D001012 ORTHO05D002597 7.9e-06 54.7 111 32.4
Rhsim09G0124600 Rhododendron simsii HOM05D001012 ORTHO05D002597 7.9e-06 54.7 116 29.3
TAR371G0813 Trochodendron aralioides HOM05D001012 ORTHO05D002597 7.9e-06 54.7 144 27.8


User provided reference genes

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