Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu027118.1 Olea europaea HOM05D001044 ORTHO05D007204 6.5e-42 173.7 92 100.0
Oeu023528.2 Olea europaea HOM05D001044 ORTHO05D007204 6.3e-37 157.1 84 95.2
TAR362G1143 Trochodendron aralioides HOM05D001044 ORTHO05D007204 7.7e-35 150.2 94 85.1
Dinv38289 Davidia involucrata HOM05D001044 ORTHO05D007204 6.5e-34 147.1 93 82.8
Aqoxy2G03830 Aquilegia oxysepala HOM05D001044 ORTHO05D007204 1.9e-33 145.6 92 82.6
MSTRG.22867 Avicennia marina HOM05D001044 ORTHO05D007204 3.2e-33 144.8 93 81.7
Cc03_g07100 Coffea canephora HOM05D001044 ORTHO05D007204 3.2e-33 144.8 93 81.7
Peaxi162Scf00047g01526 Petunia axillaris HOM05D001044 ORTHO05D007204 3.2e-33 144.8 93 82.8
GSVIVG01029035001 Vitis vinifera HOM05D001044 ORTHO05D007204 3.2e-33 144.8 93 81.7
Cfa014870 Carpinus fangiana HOM05D001044 ORTHO05D007204 5.5e-33 144.1 93 82.8
Migut.I00572 Erythranthe guttata HOM05D001044 ORTHO05D007204 5.5e-33 144.1 92 82.6
Nitab4.5_0002182g0060 Nicotiana tabacum HOM05D001044 ORTHO05D007204 5.5e-33 144.1 93 81.7
ClCG05G003650 Citrullus lanatus HOM05D001044 ORTHO05D007204 7.2e-33 143.7 93 81.7
Sed0015881 Sechium edule HOM05D001044 ORTHO05D007204 7.2e-33 143.7 93 80.6
Solyc09g091240.4 Solanum lycopersicum HOM05D001044 ORTHO05D007204 1.6e-32 142.5 93 80.6
Sopen09g034210 Solanum pennellii HOM05D001044 ORTHO05D007204 1.6e-32 142.5 93 80.6
CAN.G1588.10 Capsicum annuum HOM05D001044 ORTHO05D007204 2.1e-32 142.1 93 80.6
Thecc.04G214400 Theobroma cacao HOM05D001044 ORTHO05D007204 2.1e-32 142.1 93 83.9
Eucgr.H02871 Eucalyptus grandis HOM05D001044 ORTHO05D007204 2.7e-32 141.7 93 81.7
Sed0025176 Sechium edule HOM05D001044 ORTHO05D007204 2.7e-32 141.7 93 80.6
ATR0787G194 Amborella trichopoda HOM05D001044 ORTHO05D007204 3.6e-32 141.4 92 81.5
Nn1g03092 Nelumbo nucifera HOM05D001044 ORTHO05D007204 3.6e-32 141.4 92 81.5
Nitab4.5_0006812g0050 Nicotiana tabacum HOM05D001044 ORTHO05D007204 3.6e-32 141.4 93 79.6
PGSC0003DMG400011590 Solanum tuberosum HOM05D001044 ORTHO05D007204 3.6e-32 141.4 93 79.6
Duzib151G0345 Durio zibethinus HOM05D001044 ORTHO05D007204 4.7e-32 141.0 93 80.6
Thhalv10025564m.g Eutrema salsugineum HOM05D001044 ORTHO05D007204 4.7e-32 141.0 93 80.6
Gohir.D02G035500 Gossypium hirsutum HOM05D001044 ORTHO05D007204 4.7e-32 141.0 93 80.6
Gorai.005G039200 Gossypium raimondii HOM05D001044 ORTHO05D007204 4.7e-32 141.0 93 80.6
THA.LOC104808731 Tarenaya hassleriana HOM05D001044 ORTHO05D007204 4.7e-32 141.0 93 80.6
BcaB04g17671 Brassica carinata HOM05D001044 ORTHO05D007204 6.1e-32 140.6 93 79.6
A08p06770 Brassica napus HOM05D001044 ORTHO05D007204 6.1e-32 140.6 93 79.6
BraA08t32695Z Brassica rapa HOM05D001044 ORTHO05D007204 6.1e-32 140.6 93 79.6
CsaV3_3G011360 Cucumis sativus L. HOM05D001044 ORTHO05D007204 6.1e-32 140.6 93 79.6
Sp7g11240 Schrenkiella parvula HOM05D001044 ORTHO05D007204 6.1e-32 140.6 93 79.6
Gohir.A02G027600 Gossypium hirsutum HOM05D001044 ORTHO05D007204 8.0e-32 140.2 93 79.6
Manes.03G154600 Manihot esculenta HOM05D001044 ORTHO05D007204 1.0e-31 139.8 93 79.6
QL06p022880 Quercus lobata HOM05D001044 ORTHO05D007204 1.0e-31 139.8 93 78.5
MELO3C006344.2 Cucumis melo HOM05D001044 ORTHO05D007204 1.4e-31 139.4 93 78.5
DCAR_002280 Daucus carota HOM05D001044 ORTHO05D007204 1.4e-31 139.4 93 78.5
AT4G13590 Arabidopsis thaliana HOM05D001044 ORTHO05D007204 1.8e-31 139.0 93 80.6
BcaC07g37347 Brassica carinata HOM05D001044 ORTHO05D007204 1.8e-31 139.0 93 79.6
C08p07910 Brassica napus HOM05D001044 ORTHO05D007204 1.8e-31 139.0 93 79.6
BolC8t47642H Brassica oleracea HOM05D001044 ORTHO05D007204 1.8e-31 139.0 93 79.6
Ca_11819_v3 Cicer arietinum L. HOM05D001044 ORTHO05D007204 1.8e-31 139.0 93 79.6
Prupe.1G057500 Prunus persica HOM05D001044 ORTHO05D007204 1.8e-31 139.0 93 78.5
Rhsim02G0052200 Rhododendron simsii HOM05D001044 ORTHO05D007204 1.8e-31 139.0 93 79.6
TWI09G0323 Tripterygium wilfordii HOM05D001044 ORTHO05D007204 1.8e-31 139.0 90 80.0
vmacro15499 Vaccinium macrocarpon HOM05D001044 ORTHO05D007204 1.8e-31 139.0 93 79.6
RcHm_v2.0_Chr4g0396661 Rosa chinensis HOM05D001044 ORTHO05D007204 3.0e-31 138.3 93 76.3
Atru.chr4.1812 Acer truncatum HOM05D001044 ORTHO05D007204 4.0e-31 137.9 93 79.6
Aa31LG9G4070 Aethionema arabicum HOM05D001044 ORTHO05D007204 4.0e-31 137.9 90 81.1
AL7G43000 Arabidopsis lyrata HOM05D001044 ORTHO05D007204 4.0e-31 137.9 93 79.6
Carub.0007s2895 Capsella rubella HOM05D001044 ORTHO05D007204 4.0e-31 137.9 93 79.6
Haze_11544 Corylus avellana HOM05D001044 ORTHO05D007204 5.2e-31 137.5 93 80.6
Potri.001G053600 Populus trichocarpa HOM05D001044 ORTHO05D007204 5.2e-31 137.5 93 79.6
CANSAT78G1342 Cannabis sativa HOM05D001044 ORTHO05D007204 6.7e-31 137.1 93 76.3
CARHR219230 Cardamine hirsuta HOM05D001044 ORTHO05D007204 6.7e-31 137.1 93 80.6
PSO063G3895 Papaver somniferum HOM05D001044 ORTHO05D007204 6.7e-31 137.1 92 77.2
arahy.Tifrunner.gnm1.ann1.39LB0I Arachis hypogaea HOM05D001044 ORTHO05D007204 1.2e-30 136.3 93 77.4
COL.COLO4_05721 Corchorus olitorius HOM05D001044 ORTHO05D007204 1.2e-30 136.3 93 80.6
Potri.003G174600 Populus trichocarpa HOM05D001044 ORTHO05D007204 1.2e-30 136.3 92 78.3
CSS0000631 Camellia sinensis var. sinensis HOM05D001044 ORTHO05D007204 1.5e-30 136.0 93 80.6
Lsat_1_v5_gn_2_41161 Lactuca sativa HOM05D001044 ORTHO05D007204 2.0e-30 135.6 93 77.4
PSO017G6432 Papaver somniferum HOM05D001044 ORTHO05D007204 2.6e-30 135.2 92 75.0
Sabra03G0128100 Salix brachista HOM05D001044 ORTHO05D007204 3.3e-30 134.8 92 77.2
Sc13g0002900 Simmondsia chinensis HOM05D001044 ORTHO05D007204 3.3e-30 134.8 93 76.3
Lj6g0004400 Lotus japonicus HOM05D001044 ORTHO05D007204 5.7e-30 134.0 93 77.4
Lalb_Chr19g0128661 Lupinus albus HOM05D001044 ORTHO05D007204 5.7e-30 134.0 93 78.5
SGA_v2.0_scaffold40G15656 Striga asiatica HOM05D001044 ORTHO05D007204 5.7e-30 134.0 86 82.6
Lalb_Chr01g0011121 Lupinus albus HOM05D001044 ORTHO05D007204 9.7e-30 133.3 93 77.4
HanXRQChr14g0434281 Helianthus annuus HOM05D001044 ORTHO05D007204 1.3e-29 132.9 93 78.5
Psat6g047320 Pisum sativum HOM05D001044 ORTHO05D007204 1.3e-29 132.9 93 75.3
PGR142G4335 Punica granatum HOM05D001044 ORTHO05D007204 1.7e-29 132.5 93 76.3
FAN17G1947 Fragaria x ananassa HOM05D001044 ORTHO05D007204 2.2e-29 132.1 93 74.2
FAN22G1298 Fragaria x ananassa HOM05D001044 ORTHO05D007204 2.2e-29 132.1 93 74.2
Lju414A4T45 Lonicera japonica HOM05D001044 ORTHO05D007204 2.2e-29 132.1 94 78.7
EL10Ac3g06775 Beta vulgaris HOM05D001044 ORTHO05D007204 2.8e-29 131.7 93 77.4
Medtr1g046730 Medicago truncatula HOM05D001044 ORTHO05D007204 2.8e-29 131.7 93 76.3
Ciclev10005326m.g Citrus clementina HOM05D001044 ORTHO05D007204 3.7e-29 131.3 93 75.3
FvH4_4g05550 Fragaria vesca HOM05D001044 ORTHO05D007204 4.8e-29 131.0 93 74.2
FAN12G1460 Fragaria x ananassa HOM05D001044 ORTHO05D007204 4.8e-29 131.0 93 74.2
VMungo0720G0833 Vigna mungo HOM05D001044 ORTHO05D007204 4.8e-29 131.0 93 75.3
Phvul.007G237700 Phaseolus vulgaris HOM05D001044 ORTHO05D007204 6.3e-29 130.6 93 75.3
Actinidia39947 Actinidia chinensis HOM05D001044 ORTHO05D007204 8.2e-29 130.2 93 76.3
CiPaw.01G205300 Carya illinoinensis HOM05D001044 ORTHO05D007204 3.1e-28 128.3 93 73.1
Glyma.10G127000 Glycine max HOM05D001044 ORTHO05D007204 3.1e-28 128.3 93 76.3
CDE01G0490 Ceratophyllum demersum HOM05D001044 ORTHO05D007204 4.1e-28 127.9 92 75.0
Manes.15G049500 Manihot esculenta HOM05D001044 ORTHO05D007204 5.3e-28 127.5 93 73.1
SGA_v2.0_scaffold57G20200 Striga asiatica HOM05D001044 ORTHO05D007204 5.3e-28 127.5 81 81.5
Psat6g127160 Pisum sativum HOM05D001044 ORTHO05D007204 7.0e-28 127.1 93 72.0
arahy.Tifrunner.gnm1.ann1.9AB2IG Arachis hypogaea HOM05D001044 ORTHO05D007204 9.1e-28 126.7 86 77.9
MD13G1229400 Malus domestica HOM05D001044 ORTHO05D007204 2.0e-27 125.6 86 76.7
Os11g0544500 Oryza sativa ssp. japonica HOM05D001044 ORTHO05D007204 2.0e-27 125.6 92 73.9
unitig_62.g23813 Utricularia gibba HOM05D001044 ORTHO05D007204 2.0e-27 125.6 94 73.4
MBI07_g08929_MAGBIO Magnolia biondii HOM05D001044 ORTHO05D007204 5.0e-26 120.9 85 75.3
AUR62006283 Chenopodium quinoa HOM05D001044 ORTHO05D007204 6.5e-26 120.6 85 75.3
AUR62019635 Chenopodium quinoa HOM05D001044 ORTHO05D007204 6.5e-26 120.6 85 75.3
Cpa.g.sc59.78 Carica papaya HOM05D001044 ORTHO05D007204 3.2e-25 118.2 81 76.5
Zm00001eb088390 Zea mays HOM05D001044 ORTHO05D007204 3.2e-25 118.2 92 70.7
MD16G1235100 Malus domestica HOM05D001044 ORTHO05D007204 2.7e-24 115.2 75 77.3
Mapoly0091s0019 Marchantia polymorpha HOM05D001044 ORTHO05D007204 2.3e-23 112.1 91 63.7
Pp3c9_26170 Physcomitrium patens HOM05D001044 ORTHO05D007204 3.0e-23 111.7 93 62.4
CBR_g12688 Chara braunii HOM05D001044 ORTHO05D007204 1.2e-19 99.8 75 62.7
AagrBONN_evm.TU.Sc2ySwM_228.670 Anthoceros agrestis HOM05D001044 ORTHO05D007204 2.0e-19 99.0 94 58.5
HPP92_008897 Vanilla planifolia HOM05D001044 ORTHO05D007204 1.2e-16 89.7 55 83.6
MCO02G237 Micromonas commoda HOM05D001044 ORTHO05D007204 8.3e-13 77.0 91 42.9
GSVIVG01027223001 Vitis vinifera HOM05D001044 ORTHO05D007204 2.4e-12 75.5 56 67.9
FAN07G1012 Fragaria x ananassa HOM05D001044 ORTHO05D007204 7.0e-12 73.9 55 65.5
SEGI_25262 Sequoiadendron giganteum HOM05D001044 ORTHO05D007204 1.2e-11 73.2 55 67.3
Cre16.g660000 Chlamydomonas reinhardtii HOM05D001044 ORTHO05D007204 1.3e-10 69.7 89 42.7
AUR62019634 Chenopodium quinoa HOM05D001044 ORTHO05D007204 6.6e-10 67.4 52 65.4
MD13G1229100 Malus domestica HOM05D001044 ORTHO05D007204 2.8e-08 62.0 39 84.6
TPR.G11301 Trifolium pratense HOM05D001044 ORTHO05D007204 2.8e-08 62.0 39 84.6
MD06G1096200 Malus domestica HOM05D001044 ORTHO05D008486 8.9e-07 57.0 89 40.4
Thhalv10023558m.g Eutrema salsugineum HOM05D001044 ORTHO05D008486 1.2e-06 56.6 88 40.9
BcaB07g31439 Brassica carinata HOM05D003548 ORTHO05D008486 1.5e-06 56.2 88 40.9
BcaB07g31440 Brassica carinata HOM05D001044 ORTHO05D008486 1.5e-06 56.2 88 40.9
BcaC04g22536 Brassica carinata HOM05D001044 ORTHO05D008486 1.5e-06 56.2 88 40.9
A09p14940 Brassica napus HOM05D001044 ORTHO05D008486 1.5e-06 56.2 88 40.9
C09p18060 Brassica napus HOM05D001044 ORTHO05D008486 1.5e-06 56.2 88 40.9
BolC9t54703H Brassica oleracea HOM05D001044 ORTHO05D008486 1.5e-06 56.2 88 40.9
BraA09t37139Z Brassica rapa HOM05D001044 ORTHO05D008486 1.5e-06 56.2 88 40.9
Glyma.01G223500 Glycine max HOM05D001044 ORTHO05D008486 2.0e-06 55.8 89 40.4
Ciclev10020858m.g Citrus clementina HOM05D001044 ORTHO05D008486 2.6e-06 55.5 88 42.0
LjContig00312_ERROPOS870357g0011954 Lotus japonicus HOM05D001044 ORTHO05D008486 2.6e-06 55.5 89 39.3
Sp2g00580 Schrenkiella parvula HOM05D001044 ORTHO05D008486 2.6e-06 55.5 88 39.8
arahy.Tifrunner.gnm1.ann1.FZ52LJ Arachis hypogaea HOM05D001044 ORTHO05D008486 3.4e-06 55.1 90 38.9
arahy.Tifrunner.gnm1.ann1.U47N90 Arachis hypogaea HOM05D001044 ORTHO05D008486 3.4e-06 55.1 90 38.9
Cre02.g084350 Chlamydomonas reinhardtii HOM05D001044 ORTHO05D008486 3.4e-06 55.1 91 38.5
Lalb_Chr03g0036771 Lupinus albus HOM05D001044 ORTHO05D007204 3.4e-06 55.1 34 88.2
CSS0027074 Camellia sinensis var. sinensis HOM05D001044 ORTHO05D008486 4.4e-06 54.7 89 38.2
CARHR046790 Cardamine hirsuta HOM05D001044 ORTHO05D008486 4.4e-06 54.7 61 47.5
Prupe.5G110800 Prunus persica HOM05D001044 ORTHO05D008486 4.4e-06 54.7 71 43.7
Psat2g184200 Pisum sativum HOM05D001044 ORTHO05D008486 5.7e-06 54.3 89 40.4
TPR.G6643 Trifolium pratense HOM05D001044 ORTHO05D008486 5.7e-06 54.3 89 40.4
Carub.0002s0066 Capsella rubella HOM05D001044 ORTHO05D008486 7.5e-06 53.9 61 45.9
Duzib205G1268 Durio zibethinus HOM05D001044 ORTHO05D008486 7.5e-06 53.9 89 38.2
Migut.E01805 Erythranthe guttata HOM05D001044 ORTHO05D008486 7.5e-06 53.9 89 40.4
Phvul.002G161500 Phaseolus vulgaris HOM05D001044 ORTHO05D008486 7.5e-06 53.9 89 40.4
AL2G10880 Arabidopsis lyrata HOM05D001044 ORTHO05D008486 9.8e-06 53.5 61 45.9
Cpa.g.sc321.3 Carica papaya HOM05D001044 ORTHO05D008486 9.8e-06 53.5 89 38.2
Lj2A175T71 Lonicera japonica HOM05D001044 ORTHO05D008486 9.8e-06 53.5 89 39.3
VMungo1215G2119 Vigna mungo HOM05D001044 ORTHO05D008486 9.8e-06 53.5 89 39.3


User provided reference genes

Program Settings