Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu027088.1 Olea europaea HOM05D007538 ORTHO05D009464 9.0e-190 666.8 340 100.0
MSTRG.13737 Avicennia marina HOM05D007538 ORTHO05D009464 1.3e-58 231.1 347 45.5
Dinv25258 Davidia involucrata HOM05D007538 ORTHO05D009464 1.7e-58 230.7 347 47.0
Migut.E00746 Erythranthe guttata HOM05D007538 ORTHO05D009464 1.5e-54 217.6 339 43.7
CSS0038946 Camellia sinensis var. sinensis HOM05D007538 ORTHO05D009464 2.1e-53 213.8 351 44.4
CSS0028782 Camellia sinensis var. sinensis HOM05D007538 ORTHO05D009464 4.7e-53 212.6 351 44.2
Cc08_g03440 Coffea canephora HOM05D007538 ORTHO05D009464 2.6e-48 196.8 332 41.0
Hma1.2p1_1569F.1_g291220 Hydrangea macrophylla HOM05D007538 ORTHO05D009464 3.5e-48 196.4 349 42.4
SalBow6G3044 Salvia bowleyana HOM05D007538 ORTHO05D009464 3.0e-44 183.3 348 40.5
Nitab4.5_0000809g0070 Nicotiana tabacum HOM05D007538 ORTHO05D009464 1.5e-43 181.0 332 42.2
Cfa012515 Carpinus fangiana HOM05D007538 ORTHO05D009464 2.6e-43 180.3 355 41.4
Ciclev10001787m.g Citrus clementina HOM05D007538 ORTHO05D009464 4.4e-43 179.5 366 37.2
Thecc.03G310000 Theobroma cacao HOM05D007538 ORTHO05D009464 2.2e-42 177.2 355 37.2
PGSC0003DMG400014793 Solanum tuberosum HOM05D007538 ORTHO05D009464 3.7e-42 176.4 350 40.6
MD06G1026300 Malus domestica HOM05D007538 ORTHO05D009464 1.4e-41 174.5 353 38.5
GSVIVG01013092001 Vitis vinifera HOM05D007538 ORTHO05D009464 3.1e-41 173.3 354 38.7
Peaxi162Scf00170g00623 Petunia axillaris HOM05D007538 ORTHO05D009464 1.2e-40 171.4 330 40.9
TWI60G0985 Tripterygium wilfordii HOM05D007538 ORTHO05D009464 1.2e-40 171.4 347 37.8
Nitab4.5_0000529g0180 Nicotiana tabacum HOM05D007538 ORTHO05D009464 2.0e-40 170.6 330 41.5
Sopen08g025010 Solanum pennellii HOM05D007538 ORTHO05D009464 2.0e-40 170.6 344 39.5
Solyc08g076430.3 Solanum lycopersicum HOM05D007538 ORTHO05D009464 2.9e-39 166.8 344 39.0
Duzib205G0978 Durio zibethinus HOM05D007538 ORTHO05D009464 6.5e-39 165.6 352 37.2
FAN08G1825 Fragaria x ananassa HOM05D007538 ORTHO05D009464 6.5e-39 165.6 354 38.7
Gorai.008G224100 Gossypium raimondii HOM05D007538 ORTHO05D009464 1.5e-38 164.5 350 36.6
Potri.001G137000 Populus trichocarpa HOM05D007538 ORTHO05D009464 1.9e-38 164.1 363 36.9
CiPaw.12G068100 Carya illinoinensis HOM05D007538 ORTHO05D009464 2.5e-38 163.7 352 38.9
Gohir.D12G208500 Gossypium hirsutum HOM05D007538 ORTHO05D009464 2.5e-38 163.7 350 36.6
COL.COLO4_16943 Corchorus olitorius HOM05D007538 ORTHO05D009464 4.2e-38 162.9 344 38.1
QL12p001632 Quercus lobata HOM05D007538 ORTHO05D009464 4.2e-38 162.9 356 40.4
FAN13G1023 Fragaria x ananassa HOM05D007538 ORTHO05D009464 5.5e-38 162.5 354 38.1
Gohir.A12G206200 Gossypium hirsutum HOM05D007538 ORTHO05D009464 9.4e-38 161.8 349 36.7
RcHm_v2.0_Chr7g0211801 Rosa chinensis HOM05D007538 ORTHO05D009464 2.1e-37 160.6 356 36.8
TAR629G0149 Trochodendron aralioides HOM05D007538 ORTHO05D009464 8.0e-37 158.7 380 36.8
Actinidia01319 Actinidia chinensis HOM05D007538 ORTHO05D009464 2.3e-36 157.1 281 41.6
SGA_v2.0_scaffold36G14297 Striga asiatica HOM05D006137 ORTHO05D007697 2.3e-36 157.1 260 42.7
CANSAT21G1184 Cannabis sativa HOM05D007538 ORTHO05D009464 4.0e-36 156.4 347 36.0
FvH4_5g23080 Fragaria vesca HOM05D007538 ORTHO05D009464 4.0e-36 156.4 355 36.9
Nn1g00207 Nelumbo nucifera HOM05D007538 ORTHO05D009464 1.5e-35 154.5 351 35.6
AUR62007351 Chenopodium quinoa HOM05D007538 ORTHO05D009464 3.4e-35 153.3 350 38.0
AUR62018643 Chenopodium quinoa HOM05D007538 ORTHO05D009464 3.4e-35 153.3 350 37.1
Eucgr.E00229 Eucalyptus grandis HOM05D007538 ORTHO05D009464 4.4e-35 152.9 345 37.1
Lj2g0003780 Lotus japonicus HOM05D007538 ORTHO05D009464 5.7e-35 152.5 356 35.7
Glyma.09G207600 Glycine max HOM05D007538 ORTHO05D009464 7.5e-35 152.1 353 37.1
unitig_22.g5510 Utricularia gibba HOM05D007538 ORTHO05D009464 7.5e-35 152.1 345 35.9
Prupe.5G028100 Prunus persica HOM05D007538 ORTHO05D009464 3.7e-34 149.8 282 39.7
Sabra01G0106100 Salix brachista HOM05D007538 ORTHO05D009464 4.9e-34 149.4 349 37.0
Haze_08148 Corylus avellana HOM05D007538 ORTHO05D009464 6.3e-34 149.1 347 37.8
FAN04G2865 Fragaria x ananassa HOM05D007538 ORTHO05D009464 1.1e-33 148.3 342 36.3
Hund14370 Selenicereus undatus HOM05D007538 ORTHO05D009464 1.8e-33 147.5 359 36.2
vmacro00280 Vaccinium macrocarpon HOM05D007538 ORTHO05D009464 7.0e-33 145.6 329 38.6
FAN18G3589 Fragaria x ananassa HOM05D007538 ORTHO05D009464 4.5e-32 142.9 342 36.0
Lalb_Chr05g0215781 Lupinus albus HOM05D007538 ORTHO05D009464 1.3e-31 141.4 354 35.6
arahy.Tifrunner.gnm1.ann1.IVG2V7 Arachis hypogaea HOM05D007538 ORTHO05D009464 6.6e-31 139.0 362 35.9
arahy.Tifrunner.gnm1.ann1.UGGX0P Arachis hypogaea HOM05D007538 ORTHO05D009464 6.6e-31 139.0 362 35.9
PGR042G1771 Punica granatum HOM05D007538 ORTHO05D009464 1.1e-30 138.3 353 35.1
Aqoxy3G02177 Aquilegia oxysepala HOM05D007538 ORTHO05D009464 1.9e-30 137.5 354 35.6
Manes.17G017000 Manihot esculenta HOM05D007538 ORTHO05D009464 5.6e-30 136.0 376 32.4
EL10Ac5g12015 Beta vulgaris HOM05D007538 ORTHO05D009464 2.1e-29 134.0 337 35.3
Rhsim11G0021400 Rhododendron simsii HOM05D007538 ORTHO05D009464 2.1e-29 134.0 347 37.8
TPR.G19431 Trifolium pratense HOM05D007538 ORTHO05D009464 6.1e-29 132.5 354 36.7
Phvul.002G136900 Phaseolus vulgaris HOM05D007538 ORTHO05D009464 1.8e-28 131.0 352 33.2
Lalb_Chr16g0381091 Lupinus albus HOM05D007538 ORTHO05D009464 4.4e-27 126.3 352 32.4
TWI15G0751 Tripterygium wilfordii HOM05D007538 ORTHO05D009464 5.7e-27 125.9 291 38.5
VMungo1215G0128 Vigna mungo HOM05D007538 ORTHO05D009464 9.8e-27 125.2 351 32.8
CANSAT21G1947 Cannabis sativa HOM05D007538 ORTHO05D009464 2.2e-26 124.0 293 34.8
PSO063G5413 Papaver somniferum HOM05D007538 ORTHO05D009464 2.9e-26 123.6 349 33.8
ECA240G2786 Erigeron canadensis HOM05D007538 ORTHO05D009464 7.0e-25 119.0 348 33.3
Ah.12g055490 Amaranthus hybridus HOM05D007538 ORTHO05D009464 1.2e-24 118.2 230 38.7
HanXRQChr03g0083271 Helianthus annuus HOM05D007538 ORTHO05D009464 1.2e-24 118.2 343 33.2
Medtr5g029310 Medicago truncatula HOM05D007538 ORTHO05D009464 2.0e-24 117.5 352 34.1
DCAR_008224 Daucus carota HOM05D007538 ORTHO05D009464 5.9e-24 115.9 372 33.3
Atru.chr6.1522 Acer truncatum HOM05D007538 ORTHO05D009464 6.6e-23 112.5 291 34.0
Os02g0697200 Oryza sativa ssp. japonica HOM05D007538 ORTHO05D009464 6.6e-23 112.5 380 30.0
Psat0s3175g0080 Pisum sativum HOM05D007538 ORTHO05D009464 8.6e-23 112.1 331 33.2
Glyma.01G014500 Glycine max HOM05D007538 ORTHO05D009464 1.5e-22 111.3 283 35.3
Ca_25180_v3 Cicer arietinum L. HOM05D007538 ORTHO05D009464 9.5e-22 108.6 351 29.3
Haze_08149 Corylus avellana HOM05D007538 ORTHO05D009464 1.2e-21 108.2 274 35.8
CAN.G1987.3 Capsicum annuum HOM05D007538 ORTHO05D009464 6.2e-21 105.9 220 39.1
Sc01g0007170 Simmondsia chinensis HOM05D007538 ORTHO05D009464 6.2e-21 105.9 250 34.4
FAN18G1171 Fragaria x ananassa HOM05D007538 ORTHO05D009464 4.0e-20 103.2 335 32.2
ClCG10G001280 Citrullus lanatus HOM05D007538 ORTHO05D009464 9.2e-17 92.0 331 29.9
Sed0002033 Sechium edule HOM05D007538 ORTHO05D009464 6.0e-16 89.4 336 30.7
MELO3C013823.2 Cucumis melo HOM05D007538 ORTHO05D009464 1.0e-15 88.6 332 30.7
CsaV3_3G001350 Cucumis sativus L. HOM05D007538 ORTHO05D009464 1.0e-15 88.6 332 30.1
HPP92_020896 Vanilla planifolia HOM05D007538 ORTHO05D009464 5.0e-15 86.3 346 29.2
Lsat_1_v5_gn_6_80020 Lactuca sativa HOM05D007538 ORTHO05D009464 6.6e-15 85.9 323 29.4
Zm00001eb187890 Zea mays HOM05D007538 ORTHO05D009464 1.1e-14 85.1 377 28.6
Cpa.g.sc208.8 Carica papaya HOM05D007538 ORTHO05D009464 1.4e-12 78.2 247 31.6
MBI04_g44375_MAGBIO Magnolia biondii HOM05D007538 ORTHO05D009464 8.9e-12 75.5 136 39.0
SEGI_18774 Sequoiadendron giganteum HOM05D007538 ORTHO05D009464 4.9e-10 69.7 348 25.6
MBI04_g32200_MAGBIO Magnolia biondii HOM05D007538 ORTHO05D009464 1.3e-07 61.6 85 43.5
Psat0s1646g0240 Pisum sativum HOM05D007538 ORTHO05D009464 3.9e-07 60.1 199 30.2


User provided reference genes

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