Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu027042.1 Olea europaea HOM05D004868 ORTHO05D006030 2.6e-267 924.9 476 100.0
Oeu012475.1 Olea europaea HOM05D004868 ORTHO05D006030 4.0e-119 432.6 296 83.8
SalBow2G0736 Salvia bowleyana HOM05D004868 ORTHO05D006030 7.1e-108 395.2 296 67.6
Hma1.2p1_0332F.1_g127880 Hydrangea macrophylla HOM05D004868 ORTHO05D006030 1.9e-105 387.1 295 72.5
Peaxi162Scf00225g00143 Petunia axillaris HOM05D004868 ORTHO05D006030 4.8e-104 382.5 291 67.4
Cc02_g31280 Coffea canephora HOM05D004868 ORTHO05D006030 4.0e-103 379.4 290 71.7
Nitab4.5_0002840g0160 Nicotiana tabacum HOM05D004868 ORTHO05D006030 9.0e-103 378.3 298 72.5
Nitab4.5_0002361g0200 Nicotiana tabacum HOM05D004868 ORTHO05D006030 2.6e-102 376.7 298 72.1
Migut.B00327 Erythranthe guttata HOM05D004868 ORTHO05D006030 4.5e-102 375.9 298 72.1
MSTRG.13789 Avicennia marina HOM05D004868 ORTHO05D006030 1.7e-101 374.0 295 65.1
CAN.G134.187 Capsicum annuum HOM05D004868 ORTHO05D006030 1.7e-101 374.0 312 62.5
Solyc01g098040.3 Solanum lycopersicum HOM05D004868 ORTHO05D006030 3.8e-101 372.9 231 76.6
PGSC0003DMG400022466 Solanum tuberosum HOM05D004868 ORTHO05D006030 3.8e-101 372.9 231 76.6
Sopen01g041620 Solanum pennellii HOM05D004868 ORTHO05D006030 6.4e-101 372.1 231 76.6
Rhsim05G0148800 Rhododendron simsii HOM05D004868 ORTHO05D006030 1.9e-100 370.5 233 77.3
Potri.013G034000 Populus trichocarpa HOM05D004868 ORTHO05D006030 2.4e-100 370.2 290 65.2
MSTRG.12666 Avicennia marina HOM05D004868 ORTHO05D006030 3.2e-100 369.8 296 65.2
Ciclev10001724m.g Citrus clementina HOM05D004868 ORTHO05D006030 3.2e-100 369.8 300 62.0
COL.COLO4_13636 Corchorus olitorius HOM05D004868 ORTHO05D006030 5.5e-100 369.0 295 64.7
Manes.09G157900 Manihot esculenta HOM05D004868 ORTHO05D006030 7.1e-100 368.6 290 64.8
CSS0010529 Camellia sinensis var. sinensis HOM05D004868 ORTHO05D006030 9.3e-100 368.2 233 75.5
Actinidia33836 Actinidia chinensis HOM05D004868 ORTHO05D006030 1.6e-99 367.5 231 76.6
CSS0039857 Camellia sinensis var. sinensis HOM05D004868 ORTHO05D006030 2.7e-99 366.7 242 75.2
SGA_v2.0_scaffold146G36132 Striga asiatica HOM05D004868 ORTHO05D006030 3.5e-99 366.3 297 64.6
AT3G05100 Arabidopsis thaliana HOM05D004868 ORTHO05D006030 7.9e-99 365.2 290 63.1
CSS0000773 Camellia sinensis var. sinensis HOM05D004868 ORTHO05D006030 7.9e-99 365.2 236 74.2
BolC3t16420H Brassica oleracea HOM05D004868 ORTHO05D006030 1.0e-98 364.8 290 64.5
Potri.005G046300 Populus trichocarpa HOM05D004868 ORTHO05D006030 1.0e-98 364.8 291 63.9
QL03p000170 Quercus lobata HOM05D004868 ORTHO05D006030 1.3e-98 364.4 300 63.7
C03p41370 Brassica napus HOM05D004868 ORTHO05D006030 1.8e-98 364.0 290 64.5
CSS0028974 Camellia sinensis var. sinensis HOM05D004868 ORTHO05D006030 1.8e-98 364.0 242 74.8
CANSAT54G1013 Cannabis sativa HOM05D004868 ORTHO05D006030 1.8e-98 364.0 241 72.6
Ah.04g160130 Amaranthus hybridus HOM05D004868 ORTHO05D006030 2.3e-98 363.6 246 71.5
Gorai.007G286600 Gossypium raimondii HOM05D004868 ORTHO05D006030 2.3e-98 363.6 300 63.7
A03p33990 Brassica napus HOM05D004868 ORTHO05D006030 3.0e-98 363.2 290 63.1
TPR.G7590 Trifolium pratense HOM05D004868 ORTHO05D006030 5.1e-98 362.5 295 66.4
Haze_04309 Corylus avellana HOM05D004868 ORTHO05D006030 6.7e-98 362.1 231 74.5
Ah.06g192760 Amaranthus hybridus HOM05D004868 ORTHO05D006030 8.7e-98 361.7 249 70.7
AL3G15480 Arabidopsis lyrata HOM05D004868 ORTHO05D006030 8.7e-98 361.7 290 62.8
Medtr4g025410 Medicago truncatula HOM05D004868 ORTHO05D006030 8.7e-98 361.7 294 67.0
Thhalv10021106m.g Eutrema salsugineum HOM05D004868 ORTHO05D006030 1.1e-97 361.3 290 63.1
QL03p000506 Quercus lobata HOM05D004868 ORTHO05D006030 1.1e-97 361.3 300 63.0
Sabra05G0042300 Salix brachista HOM05D004868 ORTHO05D006030 1.5e-97 360.9 290 63.4
BcaC01g04334 Brassica carinata HOM05D004868 ORTHO05D006030 2.5e-97 360.1 290 63.8
Gohir.D11G266800 Gossypium hirsutum HOM05D004868 ORTHO05D006030 2.5e-97 360.1 300 64.0
Sp3g03920 Schrenkiella parvula HOM05D004868 ORTHO05D006030 2.5e-97 360.1 290 62.8
Thecc.05G291500 Theobroma cacao HOM05D004868 ORTHO05D006030 2.5e-97 360.1 302 70.9
BcaNung04260 Brassica carinata HOM05D004868 ORTHO05D006030 3.3e-97 359.8 290 62.4
Ca_13816_v3 Cicer arietinum L. HOM05D004868 ORTHO05D006030 3.3e-97 359.8 291 67.7
Lsat_1_v5_gn_9_40320 Lactuca sativa HOM05D004868 ORTHO05D006030 4.3e-97 359.4 233 74.2
Duzib177G0825 Durio zibethinus HOM05D004868 ORTHO05D006030 7.4e-97 358.6 302 67.2
BraA03t12574Z Brassica rapa HOM05D004868 ORTHO05D006030 1.3e-96 357.8 290 62.4
HanXRQChr05g0161431 Helianthus annuus HOM05D004868 ORTHO05D006030 1.3e-96 357.8 295 63.4
Atru.chr2.656 Acer truncatum HOM05D004868 ORTHO05D006030 1.6e-96 357.5 231 73.2
AUR62005015 Chenopodium quinoa HOM05D004868 ORTHO05D006030 1.6e-96 357.5 288 63.5
Sp2g20350 Schrenkiella parvula HOM05D004868 ORTHO05D006030 1.6e-96 357.5 236 72.5
TAR636G1948 Trochodendron aralioides HOM05D004868 ORTHO05D006030 1.6e-96 357.5 292 63.4
C07p40470 Brassica napus HOM05D004868 ORTHO05D006030 2.1e-96 357.1 290 62.1
BolC7t44582H Brassica oleracea HOM05D004868 ORTHO05D006030 2.1e-96 357.1 290 62.1
DCAR_022833 Daucus carota HOM05D004868 ORTHO05D006030 2.1e-96 357.1 228 74.6
ECA246G2619 Erigeron canadensis HOM05D004868 ORTHO05D006030 2.8e-96 356.7 293 62.1
Lalb_Chr12g0208121 Lupinus albus HOM05D004868 ORTHO05D006030 2.8e-96 356.7 293 63.5
TWI12G1223 Tripterygium wilfordii HOM05D004868 ORTHO05D006030 2.8e-96 356.7 294 62.2
FAN05G2179 Fragaria x ananassa HOM05D004868 ORTHO05D006030 4.8e-96 355.9 296 60.8
FAN05G5662 Fragaria x ananassa HOM05D004868 ORTHO05D006030 4.8e-96 355.9 296 60.8
Gohir.A11G257000 Gossypium hirsutum HOM05D004868 ORTHO05D006030 4.8e-96 355.9 298 67.4
Hund07000 Selenicereus undatus HOM05D004868 ORTHO05D006030 4.8e-96 355.9 234 73.5
TWI36G0026 Tripterygium wilfordii HOM05D004868 ORTHO05D006030 4.8e-96 355.9 298 63.1
Cfa006482 Carpinus fangiana HOM05D004868 ORTHO05D006030 6.2e-96 355.5 231 73.6
FvH4_6g03940 Fragaria vesca HOM05D004868 ORTHO05D006030 6.2e-96 355.5 300 63.0
FAN14G3773 Fragaria x ananassa HOM05D004868 ORTHO05D006030 6.2e-96 355.5 300 62.3
FAN09G4706 Fragaria x ananassa HOM05D004868 ORTHO05D006030 8.2e-96 355.1 301 61.5
EL10Ac4g09208 Beta vulgaris HOM05D004868 ORTHO05D006030 1.1e-95 354.8 233 72.1
BraA06t26695Z Brassica rapa HOM05D004868 ORTHO05D006030 1.1e-95 354.8 290 61.4
TPR.G39359 Trifolium pratense HOM05D004868 ORTHO05D006030 1.1e-95 354.8 247 69.6
Sed0014615 Sechium edule HOM05D004868 ORTHO05D006030 1.8e-95 354.0 290 63.8
Carub.0006s2543 Capsella rubella HOM05D004868 ORTHO05D006030 2.4e-95 353.6 291 61.5
CiPaw.07G009000 Carya illinoinensis HOM05D004868 ORTHO05D006030 2.4e-95 353.6 294 63.3
FAN02G0279 Fragaria x ananassa HOM05D004868 ORTHO05D006030 2.4e-95 353.6 300 60.0
VMungo0331G1201 Vigna mungo HOM05D004868 ORTHO05D006030 2.4e-95 353.6 301 62.5
BcaNung04261 Brassica carinata HOM05D004868 ORTHO05D006030 3.1e-95 353.2 290 61.7
Eucgr.H04401 Eucalyptus grandis HOM05D004868 ORTHO05D006030 4.0e-95 352.8 294 67.3
arahy.Tifrunner.gnm1.ann1.WET4Y7 Arachis hypogaea HOM05D004868 ORTHO05D006030 6.9e-95 352.1 295 62.7
Thhalv10004543m.g Eutrema salsugineum HOM05D004868 ORTHO05D006030 6.9e-95 352.1 290 61.7
RcHm_v2.0_Chr3g0452511 Rosa chinensis HOM05D004868 ORTHO05D006030 6.9e-95 352.1 243 69.5
Aa31LG5G15350 Aethionema arabicum HOM05D004868 ORTHO05D006030 9.0e-95 351.7 291 61.5
arahy.Tifrunner.gnm1.ann1.VSGL27 Arachis hypogaea HOM05D004868 ORTHO05D006030 9.0e-95 351.7 302 62.6
CARHR185710 Cardamine hirsuta HOM05D004868 ORTHO05D006030 1.2e-94 351.3 291 62.2
PGR004G1913 Punica granatum HOM05D004868 ORTHO05D006030 1.2e-94 351.3 296 61.1
Aa31LG11G8840 Aethionema arabicum HOM05D004868 ORTHO05D006030 1.5e-94 350.9 290 60.7
Phvul.010G080900 Phaseolus vulgaris HOM05D004868 ORTHO05D006030 1.5e-94 350.9 302 62.3
Prupe.6G337200 Prunus persica HOM05D004868 ORTHO05D006030 1.5e-94 350.9 246 69.5
Lj3g0018370 Lotus japonicus HOM05D004868 ORTHO05D006030 2.0e-94 350.5 293 62.8
Lalb_Chr13g0291821 Lupinus albus HOM05D004868 ORTHO05D006030 1.3e-93 347.8 293 62.5
MD04G1217100 Malus domestica HOM05D004868 ORTHO05D006030 1.7e-93 347.4 292 61.0
BcaB04g21374 Brassica carinata HOM05D004868 ORTHO05D006030 2.2e-93 347.1 294 62.9
Carub.0003s0434 Capsella rubella HOM05D004868 ORTHO05D006030 2.2e-93 347.1 290 61.0
HanXRQChr14g0447091 Helianthus annuus HOM05D004868 ORTHO05D006030 2.9e-93 346.7 230 73.9
BolC5t34872H Brassica oleracea HOM05D004868 ORTHO05D006030 4.9e-93 345.9 295 62.0
CiPaw.08G177900 Carya illinoinensis HOM05D004868 ORTHO05D006030 1.9e-92 344.0 228 72.4
MD12G1234100 Malus domestica HOM05D004868 ORTHO05D006030 7.1e-92 342.0 302 59.9
A05p42480 Brassica napus HOM05D004868 ORTHO05D006030 9.3e-92 341.7 290 60.7
C05p62140 Brassica napus HOM05D004868 ORTHO05D006030 9.3e-92 341.7 250 68.8
BraA05t23004Z Brassica rapa HOM05D004868 ORTHO05D006030 9.3e-92 341.7 290 60.7
Glyma.01G139000 Glycine max HOM05D004868 ORTHO05D006030 1.6e-91 340.9 304 62.5
Glyma.03G028300 Glycine max HOM05D004868 ORTHO05D006030 4.6e-91 339.3 223 72.2
CsaV3_1G044760 Cucumis sativus L. HOM05D004868 ORTHO05D006030 1.0e-90 338.2 242 67.4
PSO170G6220 Papaver somniferum HOM05D004868 ORTHO05D006030 1.0e-90 338.2 296 60.8
PSO210G5882 Papaver somniferum HOM05D004868 ORTHO05D006030 2.3e-90 337.0 296 60.5
Lj9A672G84 Lonicera japonica HOM05D004868 ORTHO05D006030 3.0e-90 336.7 207 76.8
MELO3C010076.2 Cucumis melo HOM05D004868 ORTHO05D006030 3.9e-90 336.3 290 59.7
Aqoxy5G00612 Aquilegia oxysepala HOM05D004868 ORTHO05D006030 5.1e-90 335.9 232 72.4
ClCG03G010920 Citrullus lanatus HOM05D004868 ORTHO05D006030 5.1e-90 335.9 242 66.9
GSVIVG01021894001 Vitis vinifera HOM05D004868 ORTHO05D006030 1.3e-88 331.3 207 75.8
Sed0017257 Sechium edule HOM05D004868 ORTHO05D006030 5.3e-87 325.9 231 68.4
AUR62000953 Chenopodium quinoa HOM05D004868 ORTHO05D006030 2.6e-86 323.6 204 75.5
unitig_8.g3689 Utricularia gibba HOM05D004868 ORTHO05D006030 7.6e-86 322.0 301 56.1
MBI18_g14729_MAGBIO Magnolia biondii HOM05D004868 ORTHO05D006030 4.2e-84 316.2 237 65.8
ATR0618G246 Amborella trichopoda HOM05D004868 ORTHO05D006030 3.6e-83 313.2 229 67.2
Lj7C479T1 Lonicera japonica HOM05D004868 ORTHO05D006030 1.8e-82 310.8 163 85.9
Zm00001eb110980 Zea mays HOM05D004868 ORTHO05D006030 3.9e-82 309.7 235 65.5
Os07g0667400 Oryza sativa ssp. japonica HOM05D004868 ORTHO05D006030 1.5e-81 307.8 233 65.2
Cpa.g.sc117.39 Carica papaya HOM05D004868 ORTHO05D006030 2.8e-80 303.5 163 84.7
Dinv02605 Davidia involucrata HOM05D004868 ORTHO05D006030 3.7e-80 303.1 162 84.6
Nn4g26018 Nelumbo nucifera HOM05D004868 ORTHO05D006030 3.7e-80 303.1 165 83.6
Psat7g231080 Pisum sativum HOM05D004868 ORTHO05D006030 4.8e-80 302.8 163 82.2
HPP92_016882 Vanilla planifolia HOM05D004868 ORTHO05D006030 3.1e-79 300.1 249 61.0
Sabra13G0033200 Salix brachista HOM05D004868 ORTHO05D006030 4.1e-79 299.7 165 83.0
Dinv17742 Davidia involucrata HOM05D004868 ORTHO05D006030 1.2e-78 298.1 163 82.8
Dinv02602 Davidia involucrata HOM05D004868 ORTHO05D006030 1.5e-78 297.7 162 84.0
vmacro05392 Vaccinium macrocarpon HOM05D004868 ORTHO05D006030 7.7e-78 295.4 164 81.7
HPP92_011336 Vanilla planifolia HOM05D004868 ORTHO05D006030 1.0e-77 295.0 253 59.7
Cpa.g.c47757 Carica papaya HOM05D004868 ORTHO05D006030 9.4e-76 288.5 152 86.8
SEGI_16580 Sequoiadendron giganteum HOM05D004868 ORTHO05D006030 1.8e-74 284.3 233 61.8
TAR365G1069 Trochodendron aralioides HOM05D004868 ORTHO05D006030 1.8e-74 284.3 261 60.5
SHI18309 Sapria himalayana HOM05D004868 ORTHO05D006030 5.3e-71 272.7 164 74.4
CDE08G0242 Ceratophyllum demersum HOM05D004868 ORTHO05D006030 4.7e-67 259.6 202 63.9
SMO203G0024 Selaginella moellendorffii HOM05D004868 ORTHO05D006030 8.8e-66 255.4 233 54.5
CARHR079420 Cardamine hirsuta HOM05D004868 ORTHO05D006030 1.5e-65 254.6 224 58.9
Sc09g0003690 Simmondsia chinensis HOM05D004868 ORTHO05D006030 9.7e-65 251.9 170 71.2
A06p37760 Brassica napus HOM05D004868 ORTHO05D006030 1.4e-63 248.1 223 57.4
AagrBONN_evm.TU.Sc2ySwM_344.3690 Anthoceros agrestis HOM05D004868 ORTHO05D006030 2.0e-62 244.2 240 54.6
Nn3g21303 Nelumbo nucifera HOM05D004868 ORTHO05D006030 1.0e-61 241.9 238 57.1
CDE02G4194 Ceratophyllum demersum HOM05D001090 ORTHO05D002687 6.7e-58 229.2 158 70.3
Pp3c9_1110 Physcomitrium patens HOM05D004868 ORTHO05D006030 4.1e-55 219.9 204 55.9
BcaC05g29994 Brassica carinata HOM05D004868 ORTHO05D006030 3.2e-52 210.3 164 64.6
HPP92_028573 Vanilla planifolia HOM05D004868 ORTHO05D006030 4.0e-50 203.4 147 65.3
BcaB04g19280 Brassica carinata HOM05D004868 ORTHO05D006030 8.9e-42 175.6 160 58.8
Lsat_1_v5_gn_5_121600 Lactuca sativa HOM05D004868 ORTHO05D027635 3.4e-17 94.0 104 49.0
Lj7C479T9 Lonicera japonica HOM05D004868 ORTHO05D027635 2.7e-14 84.3 111 50.5
BcaNung04262 Brassica carinata HOM05D004868 ORTHO05D027635 1.7e-13 81.6 107 44.9
SHI18307 Sapria himalayana HOM05D004868 ORTHO05D027635 1.4e-10 72.0 45 73.3


User provided reference genes

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