Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu027027.1 Olea europaea HOM05D000442 ORTHO05D036964 2.0e-65 252.3 127 100.0
Oeu038675.1 Olea europaea HOM05D000442 ORTHO05D036964 2.6e-41 172.2 105 86.7
Oeu031939.1 Olea europaea HOM05D001069 ORTHO05D036964 4.6e-38 161.4 105 83.8
Oeu034131.1 Olea europaea HOM05D000442 ORTHO05D006868 1.3e-35 153.3 144 60.4
MSTRG.7500 Avicennia marina HOM05D000442 ORTHO05D006868 6.7e-29 131.0 144 50.7
SalBow8G4075 Salvia bowleyana HOM05D000442 ORTHO05D006868 9.6e-28 127.1 144 47.9
CSS0033595 Camellia sinensis var. sinensis HOM05D000442 ORTHO05D006868 6.2e-27 124.4 144 52.8
MSTRG.16254 Avicennia marina HOM05D000442 ORTHO05D006868 3.1e-26 122.1 142 50.7
Actinidia32340 Actinidia chinensis HOM05D000442 ORTHO05D006868 3.4e-25 118.6 143 47.6
Dinv32233 Davidia involucrata HOM05D000442 ORTHO05D006868 4.5e-25 118.2 144 50.7
SGA_v2.0_scaffold1G00194 Striga asiatica HOM05D000442 ORTHO05D006868 7.6e-25 117.5 150 48.0
Actinidia39585 Actinidia chinensis HOM05D000442 ORTHO05D006868 1.3e-24 116.7 143 48.3
Lalb_Chr20g0117831 Lupinus albus HOM05D000442 ORTHO05D006868 3.8e-24 115.2 143 51.0
Haze_05626 Corylus avellana HOM05D000442 ORTHO05D006868 6.5e-24 114.4 143 48.3
CiPaw.09G121800 Carya illinoinensis HOM05D000442 ORTHO05D006868 8.4e-24 114.0 144 50.0
Lalb_Chr15g0086741 Lupinus albus HOM05D000442 ORTHO05D006868 8.4e-24 114.0 145 49.7
Cpa.g.sc17.4 Carica papaya HOM05D000442 ORTHO05D006868 2.5e-23 112.5 144 47.2
Lj2C320G7 Lonicera japonica HOM05D000442 ORTHO05D006868 4.2e-23 111.7 145 48.3
Glyma.05G141800 Glycine max HOM05D000442 ORTHO05D006868 5.5e-23 111.3 144 46.5
Cfa000924 Carpinus fangiana HOM05D000442 ORTHO05D006868 9.3e-23 110.5 143 46.9
Lj4g0002628 Lotus japonicus HOM05D000442 ORTHO05D006868 9.3e-23 110.5 145 46.2
VMungo0251G0691 Vigna mungo HOM05D000442 ORTHO05D006868 1.2e-22 110.2 144 47.2
QL05p055843 Quercus lobata HOM05D000442 ORTHO05D006868 1.6e-22 109.8 143 44.1
Phvul.002G180500 Phaseolus vulgaris HOM05D000442 ORTHO05D006868 2.7e-22 109.0 144 47.2
Dinv05220 Davidia involucrata HOM05D000442 ORTHO05D006868 3.5e-22 108.6 144 47.9
Atru.chr10.1168 Acer truncatum HOM05D000442 ORTHO05D006868 4.6e-22 108.2 144 47.9
Ciclev10014608m.g Citrus clementina HOM05D000442 ORTHO05D006868 4.6e-22 108.2 144 45.1
Glyma.08G097700 Glycine max HOM05D000442 ORTHO05D006868 4.6e-22 108.2 144 45.8
MD05G1281400 Malus domestica HOM05D000442 ORTHO05D006868 4.6e-22 108.2 147 44.9
Prupe.4G083200 Prunus persica HOM05D000442 ORTHO05D006868 6.0e-22 107.8 147 44.2
TWI73G0723 Tripterygium wilfordii HOM05D000442 ORTHO05D006868 6.0e-22 107.8 138 48.6
Cc00_g05750 Coffea canephora HOM05D000442 ORTHO05D006868 7.9e-22 107.5 146 48.6
Gohir.D09G077100 Gossypium hirsutum HOM05D000442 ORTHO05D006868 7.9e-22 107.5 145 44.8
Gorai.006G092200 Gossypium raimondii HOM05D000442 ORTHO05D006868 7.9e-22 107.5 145 44.8
CiPaw.10G090300 Carya illinoinensis HOM05D000442 ORTHO05D006868 1.0e-21 107.1 142 45.8
Gohir.A09G077100 Gossypium hirsutum HOM05D000442 ORTHO05D006868 1.0e-21 107.1 145 45.5
MD10G1260300 Malus domestica HOM05D000442 ORTHO05D006868 1.8e-21 106.3 147 44.9
unitig_37.g12096 Utricularia gibba HOM05D000442 ORTHO05D006868 2.3e-21 105.9 144 43.1
EL10As5g23566 Beta vulgaris HOM05D000442 ORTHO05D006868 3.0e-21 105.5 144 47.2
Nn3g20408 Nelumbo nucifera HOM05D000442 ORTHO05D006868 3.0e-21 105.5 144 44.4
AUR62024615 Chenopodium quinoa HOM05D000442 ORTHO05D006868 3.9e-21 105.1 141 45.4
Ca_00528_v3 Cicer arietinum L. HOM05D000442 ORTHO05D006868 3.9e-21 105.1 144 46.5
Nitab4.5_0005094g0030 Nicotiana tabacum HOM05D000442 ORTHO05D006868 6.7e-21 104.4 143 46.2
Psat7g081200 Pisum sativum HOM05D000442 ORTHO05D006868 8.7e-21 104.0 145 44.8
arahy.Tifrunner.gnm1.ann1.IEW56P Arachis hypogaea HOM05D000442 ORTHO05D006868 1.1e-20 103.6 144 43.1
AUR62011772 Chenopodium quinoa HOM05D000442 ORTHO05D006868 1.5e-20 103.2 141 45.4
Nitab4.5_0006038g0010 Nicotiana tabacum HOM05D000442 ORTHO05D006868 1.5e-20 103.2 143 45.5
Thecc.06G147900 Theobroma cacao HOM05D000442 ORTHO05D006868 1.5e-20 103.2 145 44.1
CAN.G42.15 Capsicum annuum HOM05D000442 ORTHO05D006868 1.9e-20 102.8 143 44.8
Nn4g26604 Nelumbo nucifera HOM05D000442 ORTHO05D006868 1.9e-20 102.8 144 45.8
Psat0s356g0040 Pisum sativum HOM05D000442 ORTHO05D006868 2.5e-20 102.4 148 48.0
Solyc08g048500.3 Solanum lycopersicum HOM05D000442 ORTHO05D006868 2.5e-20 102.4 143 45.5
Sopen08g010860 Solanum pennellii HOM05D000442 ORTHO05D006868 2.5e-20 102.4 143 45.5
PGSC0003DMG400029870 Solanum tuberosum HOM05D000442 ORTHO05D006868 2.5e-20 102.4 143 45.5
CANSAT35G1070 Cannabis sativa HOM05D000442 ORTHO05D006868 3.3e-20 102.1 137 46.7
arahy.Tifrunner.gnm1.ann1.91ARJF Arachis hypogaea HOM05D000442 ORTHO05D006868 7.4e-20 100.9 144 41.7
Manes.15G123500 Manihot esculenta HOM05D000442 ORTHO05D006868 9.7e-20 100.5 142 45.1
TPR.G13305 Trifolium pratense HOM05D000442 ORTHO05D006868 9.7e-20 100.5 145 44.8
Lj6g0008133 Lotus japonicus HOM05D000442 ORTHO05D006868 1.3e-19 100.1 144 45.1
Eucgr.E02424 Eucalyptus grandis HOM05D000442 ORTHO05D006868 2.8e-19 99.0 144 42.4
Hma1.2p1_0185F.1_g081430 Hydrangea macrophylla HOM05D000442 ORTHO05D006868 8.2e-19 97.4 124 46.8
TAR626G1820 Trochodendron aralioides HOM05D000442 ORTHO05D006868 8.2e-19 97.4 144 43.1
Ah.02g112480 Amaranthus hybridus HOM05D000442 ORTHO05D006868 1.4e-18 96.7 131 46.6
Sc17g0000310 Simmondsia chinensis HOM05D000442 ORTHO05D006868 1.8e-18 96.3 142 42.3
Duzib160G0470 Durio zibethinus HOM05D000442 ORTHO05D006868 2.4e-18 95.9 145 42.8
Rhsim13G0115500 Rhododendron simsii HOM05D000442 ORTHO05D006868 3.1e-18 95.5 148 42.6
MBI02_g03073_MAGBIO Magnolia biondii HOM05D000442 ORTHO05D006868 6.9e-18 94.4 139 41.7
MBI18_g11241_MAGBIO Magnolia biondii HOM05D000442 ORTHO05D006868 6.9e-18 94.4 139 43.2
Medtr2g019090 Medicago truncatula HOM05D000442 ORTHO05D006868 6.9e-18 94.4 149 43.0
FAN16G2020 Fragaria x ananassa HOM05D000442 ORTHO05D006868 9.0e-18 94.0 147 41.5
ClCG01G024740 Citrullus lanatus HOM05D000442 ORTHO05D006868 1.2e-17 93.6 141 42.6
Potri.011G082500 Populus trichocarpa HOM05D000442 ORTHO05D006868 1.2e-17 93.6 146 43.8
MELO3C007123.2 Cucumis melo HOM05D000442 ORTHO05D006868 2.0e-17 92.8 141 42.6
CsaV3_6G051840 Cucumis sativus L. HOM05D000442 ORTHO05D006868 2.0e-17 92.8 141 42.6
Hma1.2p1_0020F.1_g014175 Hydrangea macrophylla HOM05D000442 ORTHO05D006868 2.0e-17 92.8 154 42.9
Potri.004G066100 Populus trichocarpa HOM05D000442 ORTHO05D006868 2.0e-17 92.8 146 43.8
PGR083G2694 Punica granatum HOM05D000442 ORTHO05D006868 2.0e-17 92.8 143 43.4
Sabra11G0065800 Salix brachista HOM05D000442 ORTHO05D006868 3.4e-17 92.0 144 41.0
Peaxi162Scf00317g00017 Petunia axillaris HOM05D000442 ORTHO05D006868 4.5e-17 91.7 142 44.4
Hund09657 Selenicereus undatus HOM05D000442 ORTHO05D006868 4.5e-17 91.7 144 39.6
Aqoxy1G01680 Aquilegia oxysepala HOM05D000442 ORTHO05D006868 7.6e-17 90.9 143 41.3
FAN25G1399 Fragaria x ananassa HOM05D000442 ORTHO05D006868 1.0e-16 90.5 147 40.1
FAN25G3287 Fragaria x ananassa HOM05D000442 ORTHO05D006868 1.0e-16 90.5 147 40.1
Lsat_1_v5_gn_4_29701 Lactuca sativa HOM05D000442 ORTHO05D006868 1.7e-16 89.7 160 38.8
TPR.G26226 Trifolium pratense HOM05D000442 ORTHO05D006868 2.2e-16 89.4 144 42.4
RcHm_v2.0_Chr5g0014461 Rosa chinensis HOM05D000442 ORTHO05D006868 2.9e-16 89.0 158 39.2
DCAR_007882 Daucus carota HOM05D000442 ORTHO05D006868 6.5e-16 87.8 147 40.8
ECA234G2123 Erigeron canadensis HOM05D000442 ORTHO05D006868 9.4e-15 84.0 118 40.7
Migut.M00894 Erythranthe guttata HOM05D000442 ORTHO05D006868 9.4e-15 84.0 130 41.5
PSO541G1231 Papaver somniferum HOM05D000442 ORTHO05D006868 1.6e-14 83.2 153 36.6
PSO675G4648 Papaver somniferum HOM05D000442 ORTHO05D006868 1.6e-14 83.2 153 36.6
HPP92_005871 Vanilla planifolia HOM05D000442 ORTHO05D006868 3.6e-14 82.0 126 42.1
vmacro03341 Vaccinium macrocarpon HOM05D000442 ORTHO05D006868 4.6e-14 81.6 151 37.7
FvH4_3g05250 Fragaria vesca HOM05D000442 ORTHO05D006868 1.0e-13 80.5 150 37.3
Sed0026453 Sechium edule HOM05D000442 ORTHO05D006868 1.4e-13 80.1 144 41.0
THA.LOC104806133 Tarenaya hassleriana HOM05D000442 ORTHO05D006868 1.8e-13 79.7 84 52.4
FAN21G1137 Fragaria x ananassa HOM05D000442 ORTHO05D006868 3.0e-13 79.0 147 37.4
CDE01G0362 Ceratophyllum demersum HOM05D000442 ORTHO05D006868 3.9e-13 78.6 139 38.1
Sed0000914 Sechium edule HOM05D000442 ORTHO05D006868 3.9e-13 78.6 141 38.3
FAN11G3325 Fragaria x ananassa HOM05D000442 ORTHO05D006868 5.1e-13 78.2 151 38.4
Thhalv10000793m.g Eutrema salsugineum HOM05D000442 ORTHO05D006868 1.1e-12 77.0 87 49.4
C07p29400 Brassica napus HOM05D000442 ORTHO05D006868 1.5e-12 76.6 107 41.1
HanXRQChr16g0525791 Helianthus annuus HOM05D000442 ORTHO05D006868 1.9e-12 76.3 119 41.2
CDE12G0527 Ceratophyllum demersum HOM05D000442 ORTHO05D006868 2.5e-12 75.9 139 37.4
Sp7g15670 Schrenkiella parvula HOM05D000442 ORTHO05D006868 4.3e-12 75.1 125 37.6
TWI09G1294 Tripterygium wilfordii HOM05D000442 ORTHO05D006868 5.7e-12 74.7 144 38.2
ATR1098G152 Amborella trichopoda HOM05D000442 ORTHO05D006868 7.4e-12 74.3 127 39.4
A06p46100 Brassica napus HOM05D000442 ORTHO05D006868 7.4e-12 74.3 126 38.9
BraA06t27475Z Brassica rapa HOM05D000442 ORTHO05D006868 7.4e-12 74.3 126 38.9
Carub.0008s0173 Capsella rubella HOM05D000442 ORTHO05D006868 7.4e-12 74.3 130 38.5
Os08g0200400 Oryza sativa ssp. japonica HOM05D000442 ORTHO05D006868 7.4e-12 74.3 120 42.5
Zm00001eb171250 Zea mays HOM05D000442 ORTHO05D006868 1.3e-11 73.6 138 35.5
Aa31LG9G6720 Aethionema arabicum HOM05D000442 ORTHO05D006868 8.2e-11 70.9 130 35.4
BolC7t43480H Brassica oleracea HOM05D000442 ORTHO05D006868 1.8e-10 69.7 105 38.1
Zm00001eb413550 Zea mays HOM05D000442 ORTHO05D006868 6.9e-10 67.8 140 32.1
BcaC06g31493 Brassica carinata HOM05D000442 ORTHO05D006868 9.1e-10 67.4 88 43.2
Thhalv10027583m.g Eutrema salsugineum HOM05D000442 ORTHO05D006868 1.5e-09 66.6 80 45.0
AL8G12270 Arabidopsis lyrata HOM05D000442 ORTHO05D006868 4.5e-09 65.1 98 37.8
Sp2g11050 Schrenkiella parvula HOM05D000442 ORTHO05D006868 4.5e-09 65.1 114 35.1
BcaC09g51526 Brassica carinata HOM05D000442 ORTHO05D006868 5.9e-09 64.7 105 39.0
Zm00001eb359700 Zea mays HOM05D000442 ORTHO05D006868 7.7e-09 64.3 124 33.9
AT5G46190 Arabidopsis thaliana HOM05D000442 ORTHO05D006868 2.2e-08 62.8 59 49.2
BcaNung00008 Brassica carinata HOM05D000442 ORTHO05D006868 2.2e-08 62.8 90 40.0
Nitab4.5_0000568g0070 Nicotiana tabacum HOM05D000442 ORTHO05D001979 5.0e-08 61.6 120 33.3
Sed0005081 Sechium edule HOM05D000442 ORTHO05D007032 8.5e-08 60.8 111 36.0
AT4G18375 Arabidopsis thaliana HOM05D000442 ORTHO05D006868 1.1e-07 60.5 149 34.2
BraA01t00977Z Brassica rapa HOM05D000442 ORTHO05D006868 1.1e-07 60.5 112 35.7
CARHR175600 Cardamine hirsuta HOM05D000442 ORTHO05D006868 1.1e-07 60.5 48 54.2
TAR375G1079 Trochodendron aralioides HOM05D000442 ORTHO05D007032 1.9e-07 59.7 99 39.4
A01p10300 Brassica napus HOM05D000442 ORTHO05D006868 2.5e-07 59.3 109 33.9
BolC1t01201H Brassica oleracea HOM05D000442 ORTHO05D006868 2.5e-07 59.3 105 37.1
Aqoxy7G00059 Aquilegia oxysepala HOM05D000442 ORTHO05D007032 3.2e-07 58.9 86 40.7
EL10Ac3g05258 Beta vulgaris HOM05D000442 ORTHO05D007032 5.5e-07 58.2 96 37.5
ECA232G1797 Erigeron canadensis HOM05D000442 ORTHO05D007032 5.5e-07 58.2 82 41.5
unitig_747.g21739 Utricularia gibba HOM05D000442 ORTHO05D007032 5.5e-07 58.2 83 44.6
CAN.G206.164 Capsicum annuum HOM05D000442 ORTHO05D001979 9.4e-07 57.4 122 32.0
CARHR225160 Cardamine hirsuta HOM05D000442 ORTHO05D006868 9.4e-07 57.4 110 32.7
AUR62035554 Chenopodium quinoa HOM05D000442 ORTHO05D007032 9.4e-07 57.4 94 38.3
Sed0003761 Sechium edule HOM05D000442 ORTHO05D007032 9.4e-07 57.4 117 34.2
FAN09G1245 Fragaria x ananassa HOM05D000442 ORTHO05D001979 1.2e-06 57.0 113 40.7
Lsat_1_v5_gn_9_49861 Lactuca sativa HOM05D000442 ORTHO05D007032 1.2e-06 57.0 82 40.2
Cfa016213 Carpinus fangiana HOM05D000442 ORTHO05D007032 1.6e-06 56.6 77 42.9
AUR62006073 Chenopodium quinoa HOM05D000442 ORTHO05D007032 1.6e-06 56.6 84 39.3
Duzib084G0544 Durio zibethinus HOM05D000442 ORTHO05D007032 1.6e-06 56.6 77 42.9
HanXRQChr15g0485671 Helianthus annuus HOM05D000442 ORTHO05D007032 1.6e-06 56.6 82 40.2
Ah.07g205450 Amaranthus hybridus HOM05D000442 ORTHO05D007032 2.1e-06 56.2 108 38.0
Thhalv10012933m.g Eutrema salsugineum HOM05D000442 ORTHO05D007032 2.1e-06 56.2 77 44.2
HanXRQChr04g0109141 Helianthus annuus HOM05D000442 ORTHO05D007032 2.1e-06 56.2 101 33.7
Lj1g0001002 Lotus japonicus HOM05D000442 ORTHO05D007032 2.1e-06 56.2 80 42.5
Gohir.D12G249700 Gossypium hirsutum HOM05D000442 ORTHO05D007032 2.7e-06 55.8 77 44.2
Gorai.008G267800 Gossypium raimondii HOM05D000442 ORTHO05D007032 2.7e-06 55.8 77 44.2
Lj3A902G26 Lonicera japonica HOM05D000442 ORTHO05D007032 2.7e-06 55.8 82 39.0
PGR142G2384 Punica granatum HOM05D000442 ORTHO05D007032 2.7e-06 55.8 82 43.9
THA.LOC104799968 Tarenaya hassleriana HOM05D000442 ORTHO05D007032 2.7e-06 55.8 77 44.2
Dinv29257 Davidia involucrata HOM05D000442 ORTHO05D007032 3.6e-06 55.5 82 40.2
Gohir.A12G248900 Gossypium hirsutum HOM05D000442 ORTHO05D007032 3.6e-06 55.5 77 46.8
MD01G1222900 Malus domestica HOM05D000442 ORTHO05D007032 3.6e-06 55.5 82 41.5
Nitab4.5_0000548g0040 Nicotiana tabacum HOM05D000442 ORTHO05D007032 3.6e-06 55.5 82 43.9
Nitab4.5_0005491g0060 Nicotiana tabacum HOM05D000442 ORTHO05D007032 3.6e-06 55.5 82 43.9
Phvul.009G051000 Phaseolus vulgaris HOM05D000442 ORTHO05D007032 3.6e-06 55.5 77 42.9
VMungo1309G1354 Vigna mungo HOM05D000442 ORTHO05D007032 3.6e-06 55.5 77 42.9
CAN.G481.31 Capsicum annuum HOM05D000442 ORTHO05D007032 4.7e-06 55.1 82 42.7
Cc07_g03520 Coffea canephora HOM05D000442 ORTHO05D001979 4.7e-06 55.1 117 30.8
Haze_00230 Corylus avellana HOM05D000442 ORTHO05D007032 4.7e-06 55.1 77 44.2
Glyma.04G234100 Glycine max HOM05D000442 ORTHO05D007032 4.7e-06 55.1 77 42.9
Glyma.06G130700 Glycine max HOM05D000442 ORTHO05D007032 4.7e-06 55.1 77 42.9
Lalb_Chr23g0271631 Lupinus albus HOM05D000442 ORTHO05D007032 4.7e-06 55.1 80 40.0
Actinidia06139 Actinidia chinensis HOM05D000442 ORTHO05D007032 6.1e-06 54.7 93 37.6
BcaC03g14460 Brassica carinata HOM05D000442 ORTHO05D007032 6.1e-06 54.7 91 38.5
A02p11330 Brassica napus HOM05D000442 ORTHO05D007032 6.1e-06 54.7 91 38.5
BraA02t06196Z Brassica rapa HOM05D000442 ORTHO05D007032 6.1e-06 54.7 91 38.5
MBI06_g33739_MAGBIO Magnolia biondii HOM05D000442 ORTHO05D007032 6.1e-06 54.7 74 44.6
Solyc03g082980.3 Solanum lycopersicum HOM05D000442 ORTHO05D007032 6.1e-06 54.7 80 43.8
Sopen03g022790 Solanum pennellii HOM05D000442 ORTHO05D007032 6.1e-06 54.7 80 43.8
PGSC0003DMG400018527 Solanum tuberosum HOM05D000442 ORTHO05D007032 6.1e-06 54.7 80 43.8
Zm00001eb018350 Zea mays HOM05D000442 ORTHO05D001979 6.1e-06 54.7 125 33.6
Actinidia18660 Actinidia chinensis HOM05D000442 ORTHO05D007032 7.9e-06 54.3 77 40.3
arahy.Tifrunner.gnm1.ann1.NFFY6G Arachis hypogaea HOM05D000442 ORTHO05D007032 7.9e-06 54.3 77 41.6
arahy.Tifrunner.gnm1.ann1.WFX79I Arachis hypogaea HOM05D000442 ORTHO05D007032 7.9e-06 54.3 77 41.6
C02p18730 Brassica napus HOM05D000442 ORTHO05D007032 7.9e-06 54.3 91 38.5
BolC2t08018H Brassica oleracea HOM05D000442 ORTHO05D007032 7.9e-06 54.3 91 38.5
Lalb_Chr11g0066991 Lupinus albus HOM05D000442 ORTHO05D007032 7.9e-06 54.3 77 41.6
Peaxi162Scf00740g00227 Petunia axillaris HOM05D000442 ORTHO05D007032 7.9e-06 54.3 82 40.2
Hund05245 Selenicereus undatus HOM05D000442 ORTHO05D001242 7.9e-06 54.3 90 38.9
TWI39G0255 Tripterygium wilfordii HOM05D000442 ORTHO05D007032 7.9e-06 54.3 117 34.2
vmacro10132 Vaccinium macrocarpon HOM05D000442 ORTHO05D007032 7.9e-06 54.3 77 41.6


User provided reference genes

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