Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu026939.4 Olea europaea HOM05D006830 ORTHO05D008119 8.3e-215 750.7 595 100.0
Oeu030099.2 Olea europaea HOM05D006830 ORTHO05D008119 5.2e-92 342.8 646 63.6
Nitab4.5_0001876g0080 Nicotiana tabacum HOM05D006830 ORTHO05D008119 1.2e-40 172.2 286 42.7
Solyc09g016940.4 Solanum lycopersicum HOM05D006830 ORTHO05D008119 1.5e-38 165.2 270 44.1
Sopen09g010200 Solanum pennellii HOM05D006830 ORTHO05D008119 5.7e-38 163.3 270 43.7
Migut.J00020 Erythranthe guttata HOM05D006830 ORTHO05D008119 1.1e-36 159.1 273 43.2
QL07p031724 Quercus lobata HOM05D006830 ORTHO05D008119 5.3e-36 156.8 269 42.4
Nitab4.5_0000048g0180 Nicotiana tabacum HOM05D006830 ORTHO05D008119 3.4e-35 154.1 262 41.6
Cc06_g00270 Coffea canephora HOM05D002857 ORTHO05D008347 2.9e-34 151.0 289 40.1
arahy.Tifrunner.gnm1.ann1.QV5EPW Arachis hypogaea HOM05D006830 ORTHO05D008119 6.5e-34 149.8 299 37.5
Lj2A57T75 Lonicera japonica HOM05D006830 ORTHO05D008119 1.2e-32 145.6 352 35.5
Sc20g0007150 Simmondsia chinensis HOM05D006830 ORTHO05D008119 3.6e-32 144.1 293 38.9
MSTRG.18932 Avicennia marina HOM05D006830 ORTHO05D008119 6.1e-32 143.3 328 38.4
Actinidia29020 Actinidia chinensis HOM05D006830 ORTHO05D008119 3.9e-31 140.6 333 38.4
SGA_v2.0_scaffold85G26596 Striga asiatica HOM05D006830 ORTHO05D008119 6.7e-31 139.8 268 41.4
GSVIVG01025871001 Vitis vinifera HOM05D006830 ORTHO05D008119 2.0e-30 138.3 262 41.2
FAN09G0658 Fragaria x ananassa HOM05D006830 ORTHO05D008119 3.3e-30 137.5 290 38.3
Lj1g0026994 Lotus japonicus HOM05D006830 ORTHO05D008119 5.7e-30 136.7 273 39.2
MD12G1191100 Malus domestica HOM05D006830 ORTHO05D008119 5.7e-30 136.7 258 40.7
Peaxi162Scf00732g00253 Petunia axillaris HOM05D006830 ORTHO05D008119 7.4e-30 136.3 234 43.2
MBI15_g32284_MAGBIO Magnolia biondii HOM05D006830 ORTHO05D008119 2.2e-29 134.8 272 40.1
CSS0029082 Camellia sinensis var. sinensis HOM05D006830 ORTHO05D008119 2.8e-29 134.4 271 41.0
arahy.Tifrunner.gnm1.ann1.E2XN58 Arachis hypogaea HOM05D006830 ORTHO05D008119 8.2e-29 132.9 271 40.2
Manes.08G169600 Manihot esculenta HOM05D006830 ORTHO05D008119 2.4e-28 131.3 273 39.2
Potri.016G139000 Populus trichocarpa HOM05D006830 ORTHO05D008119 4.1e-28 130.6 267 39.3
Thecc.04G149300 Theobroma cacao HOM05D006830 ORTHO05D008119 7.0e-28 129.8 269 40.1
Rhsim05G0232400 Rhododendron simsii HOM05D006830 ORTHO05D008119 4.5e-27 127.1 267 40.1
Nn5g26811 Nelumbo nucifera HOM05D006830 ORTHO05D008119 5.9e-27 126.7 256 40.6
TWI77G0580 Tripterygium wilfordii HOM05D006830 ORTHO05D008119 1.7e-26 125.2 254 37.4
Cfa017009 Carpinus fangiana HOM05D006830 ORTHO05D008119 5.0e-26 123.6 281 38.1
PGR031G0539 Punica granatum HOM05D006830 ORTHO05D008119 5.0e-26 123.6 263 39.9
Potri.006G110400 Populus trichocarpa HOM05D006830 ORTHO05D008119 6.5e-26 123.2 267 37.8
Hma1.2p1_0537F.1_g174220 Hydrangea macrophylla HOM05D006830 ORTHO05D008119 1.1e-25 122.5 310 35.5
Hund19745 Selenicereus undatus HOM05D006830 ORTHO05D008119 1.1e-25 122.5 296 38.5
TAR636G3618 Trochodendron aralioides HOM05D006830 ORTHO05D008119 2.5e-25 121.3 262 39.7
Haze_21197 Corylus avellana HOM05D006830 ORTHO05D008119 5.5e-25 120.2 272 40.8
EL10Ac7g17129 Beta vulgaris HOM05D006830 ORTHO05D008119 2.1e-24 118.2 284 34.5
Prupe.6G296200 Prunus persica HOM05D006830 ORTHO05D008119 2.1e-24 118.2 262 38.2
RcHm_v2.0_Chr3g0460131 Rosa chinensis HOM05D006830 ORTHO05D008119 2.1e-24 118.2 262 38.5
AUR62006437 Chenopodium quinoa HOM05D006830 ORTHO05D008119 1.0e-23 115.9 291 34.0
AUR62029792 Chenopodium quinoa HOM05D006830 ORTHO05D008119 1.0e-23 115.9 289 32.9
Dinv16956 Davidia involucrata HOM05D006830 ORTHO05D008119 1.4e-23 115.5 290 37.6
Sabra04G0154900 Salix brachista HOM05D006830 ORTHO05D008119 1.4e-23 115.5 268 35.4
Ah.08g209170 Amaranthus hybridus HOM05D006830 ORTHO05D008119 1.2e-22 112.5 295 34.9
ECA248G1589 Erigeron canadensis HOM05D006830 ORTHO05D008119 1.5e-22 112.1 266 36.8
Eucgr.A00784 Eucalyptus grandis HOM05D006830 ORTHO05D008119 1.5e-22 112.1 250 39.6
FAN05G1111 Fragaria x ananassa HOM05D006830 ORTHO05D008119 1.5e-22 112.1 260 38.5
FvH4_6g09531 Fragaria vesca HOM05D006830 ORTHO05D008119 3.3e-22 110.9 262 38.2
FAN14G4211 Fragaria x ananassa HOM05D006830 ORTHO05D008119 3.3e-22 110.9 262 38.2
Medtr7g073700 Medicago truncatula HOM05D006830 ORTHO05D008119 6.3e-21 106.7 273 36.3
COL.COLO4_21252 Corchorus olitorius HOM05D006830 ORTHO05D008119 8.2e-21 106.3 229 40.2
TWI74G0093 Tripterygium wilfordii HOM05D006830 ORTHO05D008119 8.2e-21 106.3 247 36.0
Cpa.g.sc72.63 Carica papaya HOM05D006830 ORTHO05D008119 1.1e-20 105.9 241 36.5
DCAR_023967 Daucus carota HOM05D006830 ORTHO05D008119 1.4e-20 105.5 340 32.1
Hund03691 Selenicereus undatus HOM05D006830 ORTHO05D008119 1.4e-20 105.5 323 31.9
vmacro20384 Vaccinium macrocarpon HOM05D006830 ORTHO05D008119 1.4e-20 105.5 250 38.4
Gorai.006G236000 Gossypium raimondii HOM05D006830 ORTHO05D008119 4.1e-20 104.0 236 39.4
VMungo1383G1745 Vigna mungo HOM05D006830 ORTHO05D008119 4.1e-20 104.0 279 37.3
CsaV3_3G032990 Cucumis sativus L. HOM05D006830 ORTHO05D008119 2.7e-19 101.3 290 35.2
TPR.G24307 Trifolium pratense HOM05D006830 ORTHO05D008119 3.5e-19 100.9 209 36.4
Ciclev10011645m.g Citrus clementina HOM05D006830 ORTHO05D008119 4.5e-19 100.5 238 35.3
Lalb_Chr01g0023901 Lupinus albus HOM05D006830 ORTHO05D008119 4.5e-19 100.5 215 38.6
Thhalv10016585m.g Eutrema salsugineum HOM05D006830 ORTHO05D008119 5.9e-19 100.1 280 34.6
Glyma.09G273000 Glycine max HOM05D006830 ORTHO05D008119 1.0e-18 99.4 237 36.3
FAN02G1118 Fragaria x ananassa HOM05D006830 ORTHO05D008119 1.3e-18 99.0 249 34.9
Atru.chr8.80 Acer truncatum HOM05D006830 ORTHO05D008119 2.9e-18 97.8 237 36.3
MELO3C009096.2 Cucumis melo HOM05D006830 ORTHO05D008119 3.8e-18 97.4 270 36.7
Gohir.D09G215500 Gossypium hirsutum HOM05D006830 ORTHO05D008119 5.0e-18 97.1 236 38.1
Sp4g20920 Schrenkiella parvula HOM05D006830 ORTHO05D008119 2.5e-17 94.7 267 32.6
Glyma.18G216100 Glycine max HOM05D006830 ORTHO05D008119 3.2e-17 94.4 230 35.2
Ca_07782_v3 Cicer arietinum L. HOM05D006830 ORTHO05D008119 1.2e-16 92.4 315 30.2
Duzib268G1795 Durio zibethinus HOM05D006830 ORTHO05D008119 1.2e-16 92.4 218 37.6
Gohir.A09G213672 Gossypium hirsutum HOM05D006830 ORTHO05D008119 2.7e-16 91.3 219 37.0
Carub.0004s2057 Capsella rubella HOM05D006830 ORTHO05D008119 6.1e-16 90.1 270 34.4
CDE04G1359 Ceratophyllum demersum HOM05D006830 ORTHO05D008119 6.1e-16 90.1 300 31.7
unitig_22.g6617 Utricularia gibba HOM05D006830 ORTHO05D008119 8.0e-16 89.7 288 31.9
BraA03t11375Z Brassica rapa HOM05D006830 ORTHO05D008119 4.0e-15 87.4 273 33.7
ClCG10G022820 Citrullus lanatus HOM05D006830 ORTHO05D008119 5.2e-15 87.0 324 31.5
HanXRQChr01g0000521 Helianthus annuus HOM05D006830 ORTHO05D008119 8.8e-15 86.3 211 37.4
A03p21400 Brassica napus HOM05D006830 ORTHO05D008119 2.0e-14 85.1 273 33.3
PSO339G2021 Papaver somniferum HOM05D006830 ORTHO05D008119 2.0e-14 85.1 139 41.0
C03p25270 Brassica napus HOM05D006830 ORTHO05D008119 1.3e-13 82.4 273 33.0
BolC3t14921H Brassica oleracea HOM05D006830 ORTHO05D008119 1.3e-13 82.4 273 33.0
THA.LOC104806205 Tarenaya hassleriana HOM05D006830 ORTHO05D008119 1.7e-13 82.0 224 34.4
PSO384G2539 Papaver somniferum HOM05D006830 ORTHO05D008119 2.8e-13 81.3 173 36.4
CANSAT21G1452 Cannabis sativa HOM05D006830 ORTHO05D008119 4.8e-13 80.5 66 66.7
CANSAT60G0001 Cannabis sativa HOM05D006830 ORTHO05D008119 4.8e-13 80.5 66 66.7
Phvul.008G080600 Phaseolus vulgaris HOM05D006830 ORTHO05D008119 8.3e-13 79.7 186 35.5
Sed0004389 Sechium edule HOM05D006830 ORTHO05D008119 3.1e-12 77.8 225 35.6
Duzib151G0823 Durio zibethinus HOM05D006830 ORTHO05D008119 1.2e-11 75.9 205 35.6
C03p25310 Brassica napus HOM05D006830 ORTHO05D008119 3.5e-11 74.3 286 31.1
CSS0030660 Camellia sinensis var. sinensis HOM05D006830 ORTHO05D008119 7.7e-11 73.2 290 32.1
AL4G35860 Arabidopsis lyrata HOM05D006830 ORTHO05D008119 1.3e-10 72.4 196 34.2
AT2G38580 Arabidopsis thaliana HOM05D006830 ORTHO05D008119 5.0e-10 70.5 196 32.7
BcaC01g05528 Brassica carinata HOM05D006830 ORTHO05D008119 1.5e-09 68.9 266 31.6
CARHR133260 Cardamine hirsuta HOM05D006830 ORTHO05D008119 1.9e-09 68.6 224 31.2
BcaB01g03674 Brassica carinata HOM05D006830 ORTHO05D008119 5.5e-09 67.0 272 29.0
Lsat_1_v5_gn_5_151701 Lactuca sativa HOM05D006830 ORTHO05D008119 5.5e-09 67.0 71 59.2
Zm00001eb015900 Zea mays HOM05D006830 ORTHO05D008119 7.2e-09 66.6 59 57.6
CSS0037917 Camellia sinensis var. sinensis HOM05D006830 ORTHO05D008119 1.5e-06 58.9 256 29.7
Os03g0333000 Oryza sativa ssp. japonica HOM05D006830 ORTHO05D008119 1.5e-06 58.9 187 28.3
HPP92_012572 Vanilla planifolia HOM05D006830 ORTHO05D008119 3.4e-06 57.8 248 29.8


User provided reference genes

Program Settings