Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu026917.1 Olea europaea HOM05D003167 ORTHO05D003929 3.4e-101 372.1 248 100.0
Hund04098 Selenicereus undatus HOM05D003167 ORTHO05D003929 3.3e-24 116.3 180 43.9
MELO3C009413.2 Cucumis melo HOM05D003167 ORTHO05D003929 9.7e-24 114.8 181 43.6
ClCG10G019590 Citrullus lanatus HOM05D003167 ORTHO05D003929 1.3e-23 114.4 181 43.6
unitig_578.g16659 Utricularia gibba HOM05D003167 ORTHO05D003929 2.8e-23 113.2 178 43.3
Gohir.D04G106400 Gossypium hirsutum HOM05D003167 ORTHO05D003929 1.4e-22 110.9 178 42.1
Medtr1g061860 Medicago truncatula HOM05D003167 ORTHO05D003929 1.4e-22 110.9 177 42.4
Gorai.009G410400 Gossypium raimondii HOM05D003167 ORTHO05D003929 1.8e-22 110.5 177 42.4
Lj3C1008T14 Lonicera japonica HOM05D003167 ORTHO05D003929 2.4e-22 110.2 175 42.9
Thecc.05G076300 Theobroma cacao HOM05D003167 ORTHO05D003929 3.1e-22 109.8 178 41.6
THA.LOC104816364 Tarenaya hassleriana HOM05D003167 ORTHO05D003929 5.3e-22 109.0 178 42.1
Cpa.g.sc5.120 Carica papaya HOM05D003167 ORTHO05D003929 6.9e-22 108.6 176 43.2
CiPaw.10G002600 Carya illinoinensis HOM05D003167 ORTHO05D003929 6.9e-22 108.6 178 42.1
GSVIVG01033725001 Vitis vinifera HOM05D003167 ORTHO05D003929 6.9e-22 108.6 173 42.8
Dinv35839 Davidia involucrata HOM05D003167 ORTHO05D003929 9.0e-22 108.2 175 41.1
Cfa016494 Carpinus fangiana HOM05D003167 ORTHO05D003929 1.2e-21 107.8 176 42.0
Haze_19497 Corylus avellana HOM05D003167 ORTHO05D003929 1.2e-21 107.8 177 41.8
Atru.chr8.1695 Acer truncatum HOM05D003167 ORTHO05D003929 1.5e-21 107.5 181 40.9
COL.COLO4_22264 Corchorus olitorius HOM05D003167 ORTHO05D003929 1.5e-21 107.5 173 42.2
Manes.08G017200 Manihot esculenta HOM05D003167 ORTHO05D003929 2.0e-21 107.1 175 41.7
Aqoxy1G01021 Aquilegia oxysepala HOM05D003167 ORTHO05D003929 2.6e-21 106.7 178 42.1
CSS0014862 Camellia sinensis var. sinensis HOM05D003167 ORTHO05D003929 2.6e-21 106.7 178 39.9
CSS0043785 Camellia sinensis var. sinensis HOM05D003167 ORTHO05D003929 2.6e-21 106.7 178 39.9
CDE04G1328 Ceratophyllum demersum HOM05D003167 ORTHO05D003929 2.6e-21 106.7 178 41.0
Duzib093G1992 Durio zibethinus HOM05D003167 ORTHO05D003929 3.4e-21 106.3 172 41.9
Ciclev10011207m.g Citrus clementina HOM05D003167 ORTHO05D003929 4.5e-21 105.9 175 41.7
SalBow8G1467 Salvia bowleyana HOM05D003167 ORTHO05D003929 4.5e-21 105.9 176 43.2
SalBow8G3947 Salvia bowleyana HOM05D003167 ORTHO05D003929 4.5e-21 105.9 176 43.2
Sed0027110 Sechium edule HOM05D003167 ORTHO05D003929 5.9e-21 105.5 173 42.2
arahy.Tifrunner.gnm1.ann1.P92TZX Arachis hypogaea HOM05D003167 ORTHO05D003929 7.7e-21 105.1 175 41.1
arahy.Tifrunner.gnm1.ann1.WY8M22 Arachis hypogaea HOM05D003167 ORTHO05D003929 7.7e-21 105.1 175 41.1
Gohir.A04G067800 Gossypium hirsutum HOM05D003167 ORTHO05D003929 7.7e-21 105.1 175 41.1
Ah.15g091330 Amaranthus hybridus HOM05D003167 ORTHO05D003929 1.0e-20 104.8 172 40.7
Aqoxy1G01022 Aquilegia oxysepala HOM05D003167 ORTHO05D003929 1.0e-20 104.8 178 41.0
Lalb_Chr21g0315291 Lupinus albus HOM05D003167 ORTHO05D003929 1.0e-20 104.8 181 39.2
FvH4_6g17312 Fragaria vesca HOM05D003167 ORTHO05D003929 1.7e-20 104.0 178 41.0
FAN05G3544 Fragaria x ananassa HOM05D003167 ORTHO05D003929 1.7e-20 104.0 178 41.0
FAN05G3981 Fragaria x ananassa HOM05D003167 ORTHO05D003929 1.7e-20 104.0 178 41.0
FAN14G2907 Fragaria x ananassa HOM05D003167 ORTHO05D003929 1.7e-20 104.0 178 41.0
Actinidia26630 Actinidia chinensis HOM05D003167 ORTHO05D003929 2.2e-20 103.6 175 39.4
EL10Ac7g16722 Beta vulgaris HOM05D003167 ORTHO05D003929 2.2e-20 103.6 177 39.0
Phvul.001G184000 Phaseolus vulgaris HOM05D003167 ORTHO05D003929 2.9e-20 103.2 177 41.2
MSTRG.21603 Avicennia marina HOM05D003167 ORTHO05D003929 3.8e-20 102.8 171 40.4
Ca_08942_v3 Cicer arietinum L. HOM05D003167 ORTHO05D003929 3.8e-20 102.8 176 39.8
RcHm_v2.0_Chr3g0471451 Rosa chinensis HOM05D003167 ORTHO05D003929 3.8e-20 102.8 180 39.4
FAN02G2003 Fragaria x ananassa HOM05D003167 ORTHO05D003929 5.0e-20 102.4 176 40.9
Lj1g0005916 Lotus japonicus HOM05D003167 ORTHO05D003929 5.0e-20 102.4 173 40.5
Nitab4.5_0002027g0020 Nicotiana tabacum HOM05D003167 ORTHO05D003929 6.5e-20 102.1 172 41.3
Peaxi162Scf00732g00028 Petunia axillaris HOM05D003167 ORTHO05D003929 1.4e-19 100.9 184 41.8
ATR0724G050 Amborella trichopoda HOM05D003167 ORTHO05D003929 2.5e-19 100.1 187 40.6
Cc00_g14960 Coffea canephora HOM05D003167 ORTHO05D003929 2.5e-19 100.1 177 37.9
DCAR_020795 Daucus carota HOM05D003167 ORTHO05D003929 3.2e-19 99.8 172 39.5
Sabra06G0093300 Salix brachista HOM05D003167 ORTHO05D003929 4.2e-19 99.4 171 40.4
AUR62040188 Chenopodium quinoa HOM05D003167 ORTHO05D003929 5.5e-19 99.0 169 39.6
Glyma.03G188600 Glycine max HOM05D003167 ORTHO05D003929 5.5e-19 99.0 173 39.9
Thecc.08G192100 Theobroma cacao HOM05D003167 ORTHO05D003929 5.5e-19 99.0 173 38.7
Sc01g0003900 Simmondsia chinensis HOM05D003167 ORTHO05D003929 7.2e-19 98.6 174 40.2
TAR636G1269 Trochodendron aralioides HOM05D003167 ORTHO05D003929 7.2e-19 98.6 179 38.5
CANSAT80G1311 Cannabis sativa HOM05D003167 ORTHO05D003929 9.4e-19 98.2 175 40.0
AUR62042696 Chenopodium quinoa HOM05D003167 ORTHO05D003929 1.2e-18 97.8 169 39.1
CsaV3_3G036590 Cucumis sativus L. HOM05D003167 ORTHO05D003929 1.2e-18 97.8 166 41.6
TAR623G0013 Trochodendron aralioides HOM05D003167 ORTHO05D003929 1.6e-18 97.4 175 40.0
VMungo0720G2588 Vigna mungo HOM05D003167 ORTHO05D003929 1.6e-18 97.4 175 39.4
COL.COLO4_17620 Corchorus olitorius HOM05D003167 ORTHO05D003929 2.7e-18 96.7 182 39.0
Medtr7g102700 Medicago truncatula HOM05D003167 ORTHO05D003929 2.7e-18 96.7 173 39.3
SEGI_06196 Sequoiadendron giganteum HOM05D003167 ORTHO05D003929 2.7e-18 96.7 174 39.1
SEGI_13117 Sequoiadendron giganteum HOM05D003167 ORTHO05D003929 2.7e-18 96.7 174 39.1
Peaxi162Scf01089g10011 Petunia axillaris HOM05D003167 ORTHO05D003929 3.6e-18 96.3 173 38.2
TPR.G31678 Trifolium pratense HOM05D003167 ORTHO05D003929 3.6e-18 96.3 173 39.9
Cc00_g14970 Coffea canephora HOM05D003167 ORTHO05D003929 6.1e-18 95.5 171 37.4
Lj8P306T56 Lonicera japonica HOM05D003167 ORTHO05D003929 6.1e-18 95.5 180 38.3
Thecc.06G013600 Theobroma cacao HOM05D003167 ORTHO05D003929 6.1e-18 95.5 182 38.5
VMungo1383G0302 Vigna mungo HOM05D003167 ORTHO05D003929 6.1e-18 95.5 175 38.9
Migut.G00710 Erythranthe guttata HOM05D003167 ORTHO05D003929 7.9e-18 95.1 172 39.5
Lsat_1_v5_gn_2_23140 Lactuca sativa HOM05D003167 ORTHO05D003929 7.9e-18 95.1 175 38.3
Glyma.19G188800 Glycine max HOM05D003167 ORTHO05D003929 1.0e-17 94.7 171 39.2
Solyc10g085410.3 Solanum lycopersicum HOM05D003167 ORTHO05D003929 1.0e-17 94.7 171 39.2
Aa31LG1G9100 Aethionema arabicum HOM05D003167 ORTHO05D003929 1.8e-17 94.0 174 37.4
SHI27742 Sapria himalayana HOM05D003167 ORTHO05D003929 1.8e-17 94.0 178 39.9
SGA_v2.0_scaffold312G48279 Striga asiatica HOM05D003167 ORTHO05D003929 1.8e-17 94.0 169 39.1
PGSC0003DMG400040194 Solanum tuberosum HOM05D003167 ORTHO05D003929 3.0e-17 93.2 170 38.8
Lalb_Chr25g0288761 Lupinus albus HOM05D003167 ORTHO05D003929 3.9e-17 92.8 176 36.9
Sopen10g034860 Solanum pennellii HOM05D003167 ORTHO05D003929 3.9e-17 92.8 170 38.8
HPP92_017793 Vanilla planifolia HOM05D003167 ORTHO05D003929 5.1e-17 92.4 178 39.3
Rhsim03G0085500 Rhododendron simsii HOM05D003167 ORTHO05D003929 6.7e-17 92.0 179 37.4
PGR142G4079 Punica granatum HOM05D003167 ORTHO05D003929 8.8e-17 91.7 175 37.7
TPR.G27088 Trifolium pratense HOM05D003167 ORTHO05D003929 1.1e-16 91.3 167 39.5
CDE07G1466 Ceratophyllum demersum HOM05D003167 ORTHO05D003929 3.3e-16 89.7 57 80.7
vmacro07353 Vaccinium macrocarpon HOM05D003167 ORTHO05D003929 5.7e-16 89.0 175 36.6
AL1G13510 Arabidopsis lyrata HOM05D003167 ORTHO05D003929 9.7e-16 88.2 174 34.5
PSO339G0841 Papaver somniferum HOM05D003167 ORTHO05D003929 9.7e-16 88.2 173 35.3
Pp3c27_420 Physcomitrium patens HOM05D003167 ORTHO05D003929 9.7e-16 88.2 172 36.6
AT1G03910 Arabidopsis thaliana HOM05D003167 ORTHO05D003929 1.7e-15 87.4 173 34.7
Eucgr.K02416 Eucalyptus grandis HOM05D003167 ORTHO05D003929 1.7e-15 87.4 173 38.2
CARHR003240 Cardamine hirsuta HOM05D003167 ORTHO05D003929 2.2e-15 87.0 178 34.3
C05p02250 Brassica napus HOM05D003167 ORTHO05D003929 3.7e-15 86.3 173 35.3
C08p52570 Brassica napus HOM05D003167 ORTHO05D003929 4.8e-15 85.9 170 36.5
Mapoly0001s0156 Marchantia polymorpha HOM05D003167 ORTHO05D003929 4.8e-15 85.9 175 34.9
A09p68130 Brassica napus HOM05D003167 ORTHO05D003929 8.2e-15 85.1 170 35.9
BraA09t42148Z Brassica rapa HOM05D003167 ORTHO05D003929 8.2e-15 85.1 170 35.9
Carub.0001s0306 Capsella rubella HOM05D003167 ORTHO05D003929 1.4e-14 84.3 173 33.5
Thhalv10006994m.g Eutrema salsugineum HOM05D003167 ORTHO05D003929 1.4e-14 84.3 170 35.9
AagrBONN_evm.TU.Sc2ySwM_344.2239 Anthoceros agrestis HOM05D003167 ORTHO05D003929 1.8e-14 84.0 57 73.7
BolC8t52784H Brassica oleracea HOM05D003167 ORTHO05D003929 1.8e-14 84.0 170 35.9
BcaC05g24486 Brassica carinata HOM05D003167 ORTHO05D003929 2.4e-14 83.6 170 35.3
A10p02430 Brassica napus HOM05D003167 ORTHO05D003929 2.4e-14 83.6 170 35.3
SMO169G0108 Selaginella moellendorffii HOM05D003167 ORTHO05D003929 2.4e-14 83.6 59 71.2
CAN.G738.3 Capsicum annuum HOM05D003167 ORTHO05D003929 3.1e-14 83.2 162 37.7
SEGI_26849 Sequoiadendron giganteum HOM05D003167 ORTHO05D003929 3.1e-14 83.2 48 91.7
Zm00001eb061170 Zea mays HOM05D003167 ORTHO05D003929 3.1e-14 83.2 181 35.9
PSO210G0575 Papaver somniferum HOM05D003167 ORTHO05D003929 4.1e-14 82.8 60 68.3
BolC5t29003H Brassica oleracea HOM05D003167 ORTHO05D003929 5.3e-14 82.4 170 34.7
Sp1g02770 Schrenkiella parvula HOM05D003167 ORTHO05D003929 5.3e-14 82.4 169 35.5
Hma1.2p1_0564F.1_g179130 Hydrangea macrophylla HOM05D003167 ORTHO05D003929 1.5e-13 80.9 181 35.9
ECA238G2918 Erigeron canadensis HOM05D003167 ORTHO05D003929 2.0e-13 80.5 172 34.9
SMO301G0016 Selaginella moellendorffii HOM05D003167 ORTHO05D003929 7.7e-13 78.6 70 61.4
MD14G1096200 Malus domestica HOM05D003167 ORTHO05D003929 1.0e-12 78.2 180 32.8
ECA232G4802 Erigeron canadensis HOM05D003167 ORTHO05D003929 2.2e-12 77.0 172 33.1
Psat6g078080 Pisum sativum HOM05D003167 ORTHO05D003929 2.2e-12 77.0 151 36.4
SMO364G0524 Selaginella moellendorffii HOM05D003167 ORTHO05D003929 8.5e-12 75.1 67 62.7
HanXRQChr11g0325191 Helianthus annuus HOM05D003167 ORTHO05D003929 1.4e-11 74.3 171 34.5
Potri.006G118700 Populus trichocarpa HOM05D003167 ORTHO05D003929 1.9e-11 73.9 150 36.0
QL07p041296 Quercus lobata HOM05D003167 ORTHO05D003929 3.2e-11 73.2 173 35.3
Os03g0800100 Oryza sativa ssp. japonica HOM05D003167 ORTHO05D003929 7.2e-11 72.0 185 33.0
AL4G33010 Arabidopsis lyrata HOM05D003167 ORTHO05D003929 1.4e-09 67.8 181 30.4
BcaC07g42222 Brassica carinata HOM05D003167 ORTHO05D003929 1.8e-09 67.4 46 71.7
CARHR131270 Cardamine hirsuta HOM05D003167 ORTHO05D003929 1.8e-09 67.4 166 33.1
Carub.0004s1866 Capsella rubella HOM05D003167 ORTHO05D003929 2.3e-09 67.0 188 30.3
COL.COLO4_36480 Corchorus olitorius HOM05D003167 ORTHO05D003929 3.0e-09 66.6 34 88.2
Oeu005667.1 Olea europaea HOM05D003167 ORTHO05D003929 3.9e-09 66.2 36 83.3
Atru.chr10.1911 Acer truncatum HOM05D003167 ORTHO05D003929 1.5e-08 64.3 185 33.0
Prupe.7G122300 Prunus persica HOM05D003167 ORTHO05D003929 2.0e-08 63.9 149 32.9
PGR083G2067 Punica granatum HOM05D003167 ORTHO05D003929 3.3e-08 63.2 66 53.0
Medtr0130s0060 Medicago truncatula HOM05D003167 ORTHO05D003929 1.7e-07 60.8 46 67.4
Rhsim03G0079100 Rhododendron simsii HOM05D003167 ORTHO05D003929 1.4e-06 57.8 38 65.8
EL10Ac3g06890 Beta vulgaris HOM05D003167 ORTHO05D003929 1.8e-06 57.4 173 30.6
Eucgr.D02277 Eucalyptus grandis HOM05D003167 ORTHO05D003929 7.0e-06 55.5 51 64.7


User provided reference genes

Program Settings