Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu026813.1 Olea europaea HOM05D000481 ORTHO05D287368 9.3e-35 149.8 85 100.0
Oeu010888.1 Olea europaea HOM05D000481 ORTHO05D000471 2.9e-20 101.7 83 78.3
Cc08_g00090 Coffea canephora HOM05D000481 ORTHO05D000471 6.9e-14 80.5 66 63.6
CSS0014101 Camellia sinensis var. sinensis HOM05D000481 ORTHO05D000471 9.0e-14 80.1 81 55.6
CSS0043403 Camellia sinensis var. sinensis HOM05D000481 ORTHO05D000471 9.0e-14 80.1 81 55.6
vmacro05145 Vaccinium macrocarpon HOM05D000481 ORTHO05D000471 1.0e-12 76.6 86 53.5
Peaxi162Scf00992g00027 Petunia axillaris HOM05D000481 ORTHO05D000471 1.3e-12 76.3 86 51.2
Actinidia23091 Actinidia chinensis HOM05D000481 ORTHO05D000471 5.0e-12 74.3 85 49.4
SGA_v2.0_scaffold7G04053 Striga asiatica HOM05D000481 ORTHO05D000471 1.1e-11 73.2 55 69.1
Rhsim07G0162800 Rhododendron simsii HOM05D000481 ORTHO05D000471 2.5e-11 72.0 55 67.3
MSTRG.1738 Avicennia marina HOM05D000481 ORTHO05D000471 3.2e-11 71.6 61 59.0
Hma1.2p1_0230F.1_g097300 Hydrangea macrophylla HOM05D000481 ORTHO05D000471 1.6e-10 69.3 55 65.5
DCAR_007689 Daucus carota HOM05D000481 ORTHO05D000471 2.7e-10 68.6 54 63.0
Actinidia14112 Actinidia chinensis HOM05D000481 ORTHO05D000471 3.6e-10 68.2 87 47.1
CSS0037001 Camellia sinensis var. sinensis HOM05D000481 ORTHO05D000471 6.1e-10 67.4 56 64.3
TWI63G0652 Tripterygium wilfordii HOM05D000481 ORTHO05D000471 7.9e-10 67.0 84 48.8
MD08G1059400 Malus domestica HOM05D000481 ORTHO05D000471 1.0e-09 66.6 89 48.3
QL02p019911 Quercus lobata HOM05D000481 ORTHO05D000471 1.0e-09 66.6 54 66.7
Lsat_1_v5_gn_6_19821 Lactuca sativa HOM05D000481 ORTHO05D000471 1.8e-09 65.9 59 57.6
TWI34G1889 Tripterygium wilfordii HOM05D000481 ORTHO05D000471 1.8e-09 65.9 85 47.1
CAN.G1790.1 Capsicum annuum HOM05D000481 ORTHO05D000471 2.3e-09 65.5 85 48.2
Migut.E01829 Erythranthe guttata HOM05D000481 ORTHO05D000471 3.9e-09 64.7 61 57.4
HanXRQChr13g0403651 Helianthus annuus HOM05D000481 ORTHO05D000471 3.9e-09 64.7 61 55.7
FvH4_2g40830 Fragaria vesca HOM05D000481 ORTHO05D000471 5.1e-09 64.3 61 57.4
FAN15G1467 Fragaria x ananassa HOM05D000481 ORTHO05D000471 5.1e-09 64.3 61 57.4
FAN20G0186 Fragaria x ananassa HOM05D000481 ORTHO05D000471 5.1e-09 64.3 61 57.4
FAN27G1150 Fragaria x ananassa HOM05D000481 ORTHO05D000471 5.1e-09 64.3 61 57.4
Sabra18G0024500 Salix brachista HOM05D000481 ORTHO05D000471 5.1e-09 64.3 42 69.0
THA.LOC104815001 Tarenaya hassleriana HOM05D000481 ORTHO05D000471 5.1e-09 64.3 42 76.2
Eucgr.C02716 Eucalyptus grandis HOM05D000481 ORTHO05D000471 8.8e-09 63.5 67 61.2
Eucgr.J02626 Eucalyptus grandis HOM05D000481 ORTHO05D000471 8.8e-09 63.5 67 61.2
Atru.chr7.2515 Acer truncatum HOM05D000481 ORTHO05D000471 1.1e-08 63.2 56 62.5
ECA233G3139 Erigeron canadensis HOM05D000481 ORTHO05D000471 1.5e-08 62.8 57 59.6
RcHm_v2.0_Chr6g0299741 Rosa chinensis HOM05D000481 ORTHO05D000471 1.5e-08 62.8 82 46.3
TAR626G1463 Trochodendron aralioides HOM05D000481 ORTHO05D000471 2.5e-08 62.0 87 48.3
Ciclev10009362m.g Citrus clementina HOM05D000481 ORTHO05D000471 3.3e-08 61.6 44 68.2
MD15G1036900 Malus domestica HOM05D000481 ORTHO05D000471 3.3e-08 61.6 89 46.1
Cpa.g.sc127.6 Carica papaya HOM05D000481 ORTHO05D000471 7.4e-08 60.5 44 65.9
COL.COLO4_03587 Corchorus olitorius HOM05D000481 ORTHO05D000471 7.4e-08 60.5 89 46.1
Thecc.09G018200 Theobroma cacao HOM05D000481 ORTHO05D000471 7.4e-08 60.5 44 70.5
CANSAT25G1902 Cannabis sativa HOM05D000481 ORTHO05D000471 1.3e-07 59.7 57 57.9
Ah.10g035620 Amaranthus hybridus HOM05D000481 ORTHO05D000471 2.8e-07 58.5 42 71.4
Potri.018G021700 Populus trichocarpa HOM05D000481 ORTHO05D000471 3.7e-07 58.2 62 50.0
PGR044G1723 Punica granatum HOM05D000481 ORTHO05D000471 3.7e-07 58.2 45 62.2
EL10Ac2g04139 Beta vulgaris HOM05D000481 ORTHO05D000471 4.8e-07 57.8 63 57.1
A02p39910 Brassica napus HOM05D000481 ORTHO05D000471 6.3e-07 57.4 60 56.7
C02p59810 Brassica napus HOM05D000481 ORTHO05D000471 6.3e-07 57.4 60 56.7
BraA02t08954Z Brassica rapa HOM05D000481 ORTHO05D000471 6.3e-07 57.4 60 56.7
Haze_21444 Corylus avellana HOM05D000481 ORTHO05D000471 6.3e-07 57.4 63 55.6
FAN20G1709 Fragaria x ananassa HOM05D000481 ORTHO05D000471 6.3e-07 57.4 61 57.4
HanXRQChr02g0050081 Helianthus annuus HOM05D000481 ORTHO05D000471 6.3e-07 57.4 62 48.4
CiPaw.08G007400 Carya illinoinensis HOM05D000481 ORTHO05D000471 1.1e-06 56.6 87 43.7
Sp2g22360 Schrenkiella parvula HOM05D000481 ORTHO05D000471 1.1e-06 56.6 42 69.0
Carub.0006s2299 Capsella rubella HOM05D000481 ORTHO05D000471 1.4e-06 56.2 62 54.8
Cfa013086 Carpinus fangiana HOM05D000481 ORTHO05D000471 1.4e-06 56.2 63 54.0
Manes.03G010900 Manihot esculenta HOM05D000481 ORTHO05D000471 1.4e-06 56.2 69 50.7
CSS0022222 Camellia sinensis var. sinensis HOM05D000481 ORTHO05D000471 1.8e-06 55.8 41 65.9
Gohir.A13G180400 Gossypium hirsutum HOM05D000481 ORTHO05D000471 1.8e-06 55.8 48 62.5
Gorai.010G243600 Gossypium raimondii HOM05D000481 ORTHO05D000471 1.8e-06 55.8 48 62.5
Hund19600 Selenicereus undatus HOM05D000481 ORTHO05D000471 1.8e-06 55.8 71 47.9
TPR.G3135 Trifolium pratense HOM05D000481 ORTHO05D000471 1.8e-06 55.8 50 58.0
BcaC03g17922 Brassica carinata HOM05D000481 ORTHO05D000471 2.4e-06 55.5 60 55.0
BcaNung03204 Brassica carinata HOM05D000481 ORTHO05D000471 2.4e-06 55.5 42 66.7
BcaNung03205 Brassica carinata HOM05D000481 ORTHO05D000471 2.4e-06 55.5 42 66.7
BolC2t12038H Brassica oleracea HOM05D000481 ORTHO05D000471 2.4e-06 55.5 60 55.0
AUR62031582 Chenopodium quinoa HOM05D000481 ORTHO05D000471 2.4e-06 55.5 51 58.8
Gohir.D13G188400 Gossypium hirsutum HOM05D000481 ORTHO05D000471 2.4e-06 55.5 48 62.5
Nitab4.5_0000486g0070 Nicotiana tabacum HOM05D000481 ORTHO05D000471 2.4e-06 55.5 77 49.4
TAR625G1376 Trochodendron aralioides HOM05D000481 ORTHO05D000471 2.4e-06 55.5 61 52.5
Aa31LG11G4410 Aethionema arabicum HOM05D000481 ORTHO05D000471 3.1e-06 55.1 68 50.0
BcaNung02291 Brassica carinata HOM05D000481 ORTHO05D000471 3.1e-06 55.1 42 66.7
A06p35920 Brassica napus HOM05D000481 ORTHO05D000471 3.1e-06 55.1 42 66.7
BolC7t44796H Brassica oleracea HOM05D000481 ORTHO05D000471 3.1e-06 55.1 42 66.7
BraA06t26518Z Brassica rapa HOM05D000481 ORTHO05D000471 3.1e-06 55.1 42 66.7
CARHR188320 Cardamine hirsuta HOM05D000481 ORTHO05D000471 3.1e-06 55.1 61 49.2
COL.COLO4_26668 Corchorus olitorius HOM05D000481 ORTHO05D000471 3.1e-06 55.1 42 69.0
Nitab4.5_0013411g0010 Nicotiana tabacum HOM05D000481 ORTHO05D000471 3.1e-06 55.1 77 46.8
Solyc03g117100.3 Solanum lycopersicum HOM05D000481 ORTHO05D000471 3.1e-06 55.1 42 64.3
Sopen03g036010 Solanum pennellii HOM05D000481 ORTHO05D000471 3.1e-06 55.1 42 64.3
PGSC0003DMG400014125 Solanum tuberosum HOM05D000481 ORTHO05D000471 3.1e-06 55.1 42 64.3
AT5G25170 Arabidopsis thaliana HOM05D000481 ORTHO05D000471 4.1e-06 54.7 61 49.2
BcaB07g29938 Brassica carinata HOM05D000481 ORTHO05D000471 4.1e-06 54.7 57 50.9
Duzib168G2213 Durio zibethinus HOM05D000481 ORTHO05D000471 4.1e-06 54.7 89 42.7
Thecc.06G038800 Theobroma cacao HOM05D000481 ORTHO05D000471 4.1e-06 54.7 43 67.4
AUR62012458 Chenopodium quinoa HOM05D000481 ORTHO05D000471 5.3e-06 54.3 51 56.9
AL6G36830 Arabidopsis lyrata HOM05D000481 ORTHO05D000471 6.9e-06 53.9 61 47.5
Dinv23303 Davidia involucrata HOM05D000481 ORTHO05D000471 6.9e-06 53.9 42 64.3
Thhalv10004898m.g Eutrema salsugineum HOM05D000481 ORTHO05D000471 6.9e-06 53.9 61 49.2
Gohir.A05G120300 Gossypium hirsutum HOM05D000481 ORTHO05D000471 6.9e-06 53.9 44 63.6
Gohir.D05G121300 Gossypium hirsutum HOM05D000481 ORTHO05D000471 6.9e-06 53.9 44 63.6
Gorai.009G124800 Gossypium raimondii HOM05D000481 ORTHO05D000471 6.9e-06 53.9 44 63.6
CsaV3_4G036760 Cucumis sativus L. HOM05D000481 ORTHO05D000471 9.1e-06 53.5 61 49.2
Sed0006237 Sechium edule HOM05D000481 ORTHO05D000471 9.1e-06 53.5 53 52.8


User provided reference genes

Program Settings