Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu026729.1 Olea europaea HOM05D005652 ORTHO05D007300 4.6e-36 154.1 79 100.0
Oeu050252.1 Olea europaea HOM05D005652 ORTHO05D007300 1.2e-31 139.4 71 98.6
MSTRG.22423 Avicennia marina HOM05D005652 ORTHO05D007300 2.6e-31 138.3 71 98.6
Migut.N03303 Erythranthe guttata HOM05D005652 ORTHO05D007300 2.6e-31 138.3 71 98.6
QL09p036189 Quercus lobata HOM05D005652 ORTHO05D007300 5.8e-31 137.1 78 89.7
Dinv27358 Davidia involucrata HOM05D005652 ORTHO05D007300 7.6e-31 136.7 71 97.2
Oeu050889.1 Olea europaea HOM05D005652 ORTHO05D007300 7.6e-31 136.7 71 97.2
Nitab4.5_0000030g0080 Nicotiana tabacum HOM05D005652 ORTHO05D007300 1.3e-30 136.0 72 98.6
Potri.002G087200 Populus trichocarpa HOM05D005652 ORTHO05D007300 2.2e-30 135.2 74 95.9
Potri.005G173800 Populus trichocarpa HOM05D005652 ORTHO05D007300 2.2e-30 135.2 74 95.9
Sabra02G0068700 Salix brachista HOM05D005652 ORTHO05D007300 2.2e-30 135.2 74 95.9
SalBow7G3105 Salvia bowleyana HOM05D005652 ORTHO05D007300 2.9e-30 134.8 74 94.6
Hund27043 Selenicereus undatus HOM05D005652 ORTHO05D007300 4.9e-30 134.0 70 94.3
PGSC0003DMG400030853 Solanum tuberosum HOM05D005652 ORTHO05D007300 4.9e-30 134.0 73 95.9
ClCG03G009400 Citrullus lanatus HOM05D005652 ORTHO05D007300 6.4e-30 133.7 67 100.0
MELO3C003038.2 Cucumis melo HOM05D005652 ORTHO05D007300 6.4e-30 133.7 67 100.0
CsaV3_5G023210 Cucumis sativus L. HOM05D005652 ORTHO05D007300 6.4e-30 133.7 67 100.0
Sed0000902 Sechium edule HOM05D005652 ORTHO05D007300 6.4e-30 133.7 67 100.0
Manes.18G074500 Manihot esculenta HOM05D005652 ORTHO05D007300 1.1e-29 132.9 74 94.6
PGR042G1865 Punica granatum HOM05D005652 ORTHO05D007300 1.1e-29 132.9 71 94.4
Nitab4.5_0000943g0120 Nicotiana tabacum HOM05D005652 ORTHO05D007300 1.4e-29 132.5 71 97.2
Hund16832 Selenicereus undatus HOM05D005652 ORTHO05D007300 1.4e-29 132.5 71 95.8
Solyc12g096120.2 Solanum lycopersicum HOM05D005652 ORTHO05D007300 1.4e-29 132.5 74 93.2
Sopen12g032000 Solanum pennellii HOM05D005652 ORTHO05D007300 1.4e-29 132.5 74 93.2
PGSC0003DMG400029291 Solanum tuberosum HOM05D005652 ORTHO05D007300 1.4e-29 132.5 74 93.2
Ah.05g172270 Amaranthus hybridus HOM05D005652 ORTHO05D007300 1.9e-29 132.1 70 94.3
Cc06_g19090 Coffea canephora HOM05D005652 ORTHO05D007300 1.9e-29 132.1 71 97.2
Peaxi162Scf00408g00839 Petunia axillaris HOM05D005652 ORTHO05D007300 1.9e-29 132.1 71 97.2
TWI12G1472 Tripterygium wilfordii HOM05D005652 ORTHO05D007300 1.9e-29 132.1 71 97.2
CANSAT54G2625 Cannabis sativa HOM05D005652 ORTHO05D007300 2.4e-29 131.7 66 100.0
CiPaw.05G226800 Carya illinoinensis HOM05D005652 ORTHO05D007300 2.4e-29 131.7 71 97.2
FvH4_2g26390 Fragaria vesca HOM05D005652 ORTHO05D007300 2.4e-29 131.7 66 100.0
FAN20G1151 Fragaria x ananassa HOM05D005652 ORTHO05D007300 2.4e-29 131.7 66 100.0
FAN24G1202 Fragaria x ananassa HOM05D000102 ORTHO05D003793 2.4e-29 131.7 66 100.0
FAN27G1241 Fragaria x ananassa HOM05D005652 ORTHO05D007300 2.4e-29 131.7 66 100.0
Glyma.04G252400 Glycine max HOM05D005652 ORTHO05D007300 2.4e-29 131.7 66 100.0
Glyma.06G110100 Glycine max HOM05D005652 ORTHO05D007300 2.4e-29 131.7 66 100.0
Lalb_Chr08g0241571 Lupinus albus HOM05D005652 ORTHO05D007300 2.4e-29 131.7 66 100.0
Lalb_Chr23g0270881 Lupinus albus HOM05D005652 ORTHO05D007300 2.4e-29 131.7 66 100.0
MD08G1169400 Malus domestica HOM05D005652 ORTHO05D007300 2.4e-29 131.7 66 100.0
MD15G1356000 Malus domestica HOM05D005652 ORTHO05D007300 2.4e-29 131.7 66 100.0
Phvul.009G121900 Phaseolus vulgaris HOM05D005652 ORTHO05D007300 2.4e-29 131.7 66 100.0
RcHm_v2.0_Chr6g0294951 Rosa chinensis HOM05D005652 ORTHO05D007300 2.4e-29 131.7 66 100.0
Solyc08g075780.4 Solanum lycopersicum HOM05D005652 ORTHO05D007300 2.4e-29 131.7 73 94.5
TWI56G0667 Tripterygium wilfordii HOM05D005652 ORTHO05D007300 2.4e-29 131.7 66 100.0
Hma1.2p1_0009F.1_g006210 Hydrangea macrophylla HOM05D005652 ORTHO05D007300 5.4e-29 130.6 66 98.5
Prupe.1G503300 Prunus persica HOM05D005652 ORTHO05D007300 5.4e-29 130.6 66 98.5
arahy.Tifrunner.gnm1.ann1.AJPJ4J Arachis hypogaea HOM05D005652 ORTHO05D007300 7.1e-29 130.2 65 100.0
CSS0012578 Camellia sinensis var. sinensis HOM05D005652 ORTHO05D007300 7.1e-29 130.2 65 100.0
Medtr5g059210 Medicago truncatula HOM05D005652 ORTHO05D007300 7.1e-29 130.2 65 100.0
Psat2g096080 Pisum sativum HOM05D005652 ORTHO05D007300 7.1e-29 130.2 65 100.0
TPR.G8501 Trifolium pratense HOM05D005652 ORTHO05D007300 7.1e-29 130.2 65 100.0
unitig_37.g12684 Utricularia gibba HOM05D005652 ORTHO05D007300 7.1e-29 130.2 67 97.0
ECA238G1260 Erigeron canadensis HOM05D005652 ORTHO05D007300 9.2e-29 129.8 69 94.2
Sc23g0000830 Simmondsia chinensis HOM05D005652 ORTHO05D007300 9.2e-29 129.8 71 95.8
CDE06G1598 Ceratophyllum demersum HOM05D005652 ORTHO05D007300 1.2e-28 129.4 66 98.5
CDE08G1473 Ceratophyllum demersum HOM05D005652 ORTHO05D007300 1.2e-28 129.4 66 98.5
Ciclev10002945m.g Citrus clementina HOM05D005652 ORTHO05D007300 1.2e-28 129.4 66 98.5
Duzib041G0199 Durio zibethinus HOM05D005652 ORTHO05D007300 1.2e-28 129.4 66 98.5
Duzib093G1773 Durio zibethinus HOM05D005652 ORTHO05D007300 1.2e-28 129.4 66 98.5
Glyma.14G163800 Glycine max HOM05D005652 ORTHO05D007300 1.2e-28 129.4 66 98.5
Gohir.A02G074200 Gossypium hirsutum HOM05D005652 ORTHO05D007300 1.2e-28 129.4 66 98.5
Gohir.A06G041900 Gossypium hirsutum HOM05D005652 ORTHO05D007300 1.2e-28 129.4 66 98.5
Gohir.D06G042900 Gossypium hirsutum HOM05D005652 ORTHO05D007300 1.2e-28 129.4 66 98.5
Gorai.005G091100 Gossypium raimondii HOM05D005652 ORTHO05D007300 1.2e-28 129.4 66 98.5
Gorai.010G048100 Gossypium raimondii HOM05D005652 ORTHO05D007300 1.2e-28 129.4 66 98.5
Lj1g0016776 Lotus japonicus HOM05D005652 ORTHO05D007300 1.2e-28 129.4 66 98.5
Thecc.08G119900 Theobroma cacao HOM05D005652 ORTHO05D007300 1.2e-28 129.4 66 98.5
Zm00001eb140360 Zea mays HOM05D005652 ORTHO05D007300 1.2e-28 129.4 70 90.0
EL10Ac1g00017 Beta vulgaris HOM05D005652 ORTHO05D007300 1.6e-28 129.0 73 91.8
Atru.chr13.1343 Acer truncatum HOM05D005652 ORTHO05D007300 2.1e-28 128.6 66 98.5
MBI09_g06382_MAGBIO Magnolia biondii HOM05D005652 ORTHO05D007300 2.1e-28 128.6 65 98.5
Nitab4.5_0013867g0020 Nicotiana tabacum HOM05D005652 ORTHO05D007300 2.1e-28 128.6 71 94.4
Peaxi162Scf00876g00433 Petunia axillaris HOM05D005652 ORTHO05D007300 2.1e-28 128.6 72 94.4
THA.LOC104813142 Tarenaya hassleriana HOM05D005652 ORTHO05D007300 2.1e-28 128.6 66 98.5
THA.LOC104817112 Tarenaya hassleriana HOM05D005652 ORTHO05D007300 2.1e-28 128.6 66 98.5
ATR0041G005 Amborella trichopoda HOM05D005652 ORTHO05D007300 2.7e-28 128.3 65 98.5
Aqoxy6G01736 Aquilegia oxysepala HOM05D005652 ORTHO05D007300 2.7e-28 128.3 66 97.0
AL2G37930 Arabidopsis lyrata HOM05D005652 ORTHO05D007300 2.7e-28 128.3 65 96.9
BcaB05g25069 Brassica carinata HOM05D005652 ORTHO05D007300 2.7e-28 128.3 65 96.9
Ca_19025_v3 Cicer arietinum L. HOM05D005652 ORTHO05D007300 2.7e-28 128.3 66 97.0
Ca_26775_v3 Cicer arietinum L. HOM05D005652 ORTHO05D007300 2.7e-28 128.3 66 97.0
Nn5g28127 Nelumbo nucifera HOM05D005652 ORTHO05D007300 2.7e-28 128.3 64 100.0
Nitab4.5_0014082g0020 Nicotiana tabacum HOM05D005652 ORTHO05D007300 2.7e-28 128.3 74 91.9
GSVIVG01008919001 Vitis vinifera HOM05D005652 ORTHO05D007300 2.7e-28 128.3 64 100.0
arahy.Tifrunner.gnm1.ann1.KZ1VTZ Arachis hypogaea HOM05D005652 ORTHO05D007300 3.5e-28 127.9 65 98.5
HanXRQChr14g0432351 Helianthus annuus HOM05D005652 ORTHO05D007300 6.0e-28 127.1 71 93.0
SalBow7G1395 Salvia bowleyana HOM05D005652 ORTHO05D007300 6.0e-28 127.1 73 91.8
TAR376G0464 Trochodendron aralioides HOM05D005652 ORTHO05D007300 6.0e-28 127.1 64 98.4
Aa31LG4G7830 Aethionema arabicum HOM05D005652 ORTHO05D007300 7.8e-28 126.7 66 95.5
AT1G77710 Arabidopsis thaliana HOM05D005652 ORTHO05D007300 7.8e-28 126.7 66 95.5
BcaB02g07127 Brassica carinata HOM05D005652 ORTHO05D007300 7.8e-28 126.7 66 95.5
BcaC03g15763 Brassica carinata HOM05D005652 ORTHO05D007300 7.8e-28 126.7 66 95.5
BcaC08g45458 Brassica carinata HOM05D005652 ORTHO05D007300 7.8e-28 126.7 66 95.5
A07p27870 Brassica napus HOM05D005652 ORTHO05D007300 7.8e-28 126.7 66 95.5
C06p30860 Brassica napus HOM05D005652 ORTHO05D007300 7.8e-28 126.7 66 95.5
BolC6t38248H Brassica oleracea HOM05D005652 ORTHO05D007300 7.8e-28 126.7 66 95.5
BraA07t30426Z Brassica rapa HOM05D005652 ORTHO05D007300 7.8e-28 126.7 66 95.5
Carub.0002s2459 Capsella rubella HOM05D005652 ORTHO05D007300 7.8e-28 126.7 66 95.5
CARHR071220 Cardamine hirsuta HOM05D005652 ORTHO05D007300 7.8e-28 126.7 66 95.5
Thhalv10019370m.g Eutrema salsugineum HOM05D005652 ORTHO05D007300 7.8e-28 126.7 66 95.5
Sp5g32880 Schrenkiella parvula HOM05D005652 ORTHO05D007300 7.8e-28 126.7 66 95.5
CAN.G1483.5 Capsicum annuum HOM05D005652 ORTHO05D007300 1.0e-27 126.3 63 100.0
Gohir.D02G081400 Gossypium hirsutum HOM05D005652 ORTHO05D007300 1.3e-27 125.9 66 97.0
PSO170G5049 Papaver somniferum HOM05D005652 ORTHO05D007300 1.3e-27 125.9 64 98.4
PSO528G0083 Papaver somniferum HOM05D005652 ORTHO05D007300 1.3e-27 125.9 64 98.4
MSTRG.1473 Avicennia marina HOM05D005652 ORTHO05D007300 5.1e-27 124.0 62 100.0
Eucgr.F03755 Eucalyptus grandis HOM05D005652 ORTHO05D007300 5.1e-27 124.0 62 100.0
Lsat_1_v5_gn_5_65281 Lactuca sativa HOM05D005652 ORTHO05D007300 5.1e-27 124.0 69 89.9
Haze_00495 Corylus avellana HOM05D000102 ORTHO05D003793 6.6e-27 123.6 75 88.0
Os01g0962400 Oryza sativa ssp. japonica HOM05D005652 ORTHO05D007300 6.6e-27 123.6 63 96.8
Mapoly0081s0039 Marchantia polymorpha HOM05D005652 ORTHO05D007300 8.7e-27 123.2 64 95.3
Pp3c6_16720 Physcomitrium patens HOM05D005652 ORTHO05D007300 8.7e-27 123.2 64 95.3
SGA_v2.0_scaffold24G10489 Striga asiatica HOM05D005652 ORTHO05D007300 8.7e-27 123.2 73 90.4
AagrBONN_evm.TU.Sc2ySwM_362.1619 Anthoceros agrestis HOM05D005652 ORTHO05D007300 3.3e-26 121.3 64 92.2
CBR_g44443 Chara braunii HOM05D005652 ORTHO05D007300 9.6e-26 119.8 62 95.2
Migut.C01167 Erythranthe guttata HOM05D005652 ORTHO05D007300 9.6e-26 119.8 61 98.4
HPP92_028057 Vanilla planifolia HOM05D005652 ORTHO05D007300 1.4e-24 115.9 78 80.8
FAN15G0151 Fragaria x ananassa HOM05D000102 ORTHO05D003793 1.8e-24 115.5 90 72.2
SMO147G0269 Selaginella moellendorffii HOM05D005652 ORTHO05D007300 2.4e-24 115.2 71 84.5
Oeu062544.1 Olea europaea HOM05D005652 ORTHO05D007300 1.5e-23 112.5 69 87.0
Actinidia02604 Actinidia chinensis HOM05D005652 ORTHO05D007300 2.0e-23 112.1 82 75.6
AUR62004713 Chenopodium quinoa HOM05D005652 ORTHO05D007300 1.7e-22 109.0 61 93.4
Cpa.g.sc36.14 Carica papaya HOM05D005652 ORTHO05D007300 1.9e-21 105.5 64 87.5
COL.COLO4_38344 Corchorus olitorius HOM05D005652 ORTHO05D007300 5.4e-21 104.0 54 98.1
Haze_27250 Corylus avellana HOM05D005652 ORTHO05D007300 5.1e-19 97.4 69 68.1
Actinidia13808 Actinidia chinensis HOM05D005652 ORTHO05D007300 7.3e-18 93.6 50 92.0
PRCOL_00001930 Prasinoderma coloniale HOM05D005652 ORTHO05D007300 3.6e-17 91.3 62 79.0
CAN.G947.38 Capsicum annuum HOM05D005652 ORTHO05D007300 1.8e-16 89.0 44 100.0
AUR62023629 Chenopodium quinoa HOM05D000102 ORTHO05D003793 1.8e-16 89.0 44 100.0
Rhsim11G0066600 Rhododendron simsii HOM05D005652 ORTHO05D007300 1.8e-16 89.0 44 100.0
Glyma.13G082800 Glycine max HOM05D005652 ORTHO05D007300 2.0e-15 85.5 44 97.7
AagrBONN_evm.TU.Sc2ySwM_344.240 Anthoceros agrestis HOM05D005652 ORTHO05D007300 1.8e-11 72.4 41 85.4
Actinidia03505 Actinidia chinensis HOM05D005652 ORTHO05D054027 8.1e-09 63.5 78 51.3
TAR381G0412 Trochodendron aralioides HOM05D000102 ORTHO05D003793 8.1e-09 63.5 32 96.9
BraA02t07181Z Brassica rapa HOM05D005652 ORTHO05D007300 1.1e-08 63.2 32 96.9
Dinv20715 Davidia involucrata HOM05D005652 ORTHO05D185765 2.6e-07 58.5 39 76.9
Sed0022236 Sechium edule HOM05D005652 ORTHO05D007300 2.6e-07 58.5 70 55.7
Actinidia34351 Actinidia chinensis HOM05D005652 ORTHO05D057191 3.8e-06 54.7 32 81.2


User provided reference genes

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