Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu026626.2 Olea europaea HOM05D004608 ORTHO05D006533 6.2e-233 810.4 419 100.0
Migut.M01599 Erythranthe guttata HOM05D004608 ORTHO05D006533 1.3e-182 643.3 423 81.6
Cc05_g15480 Coffea canephora HOM05D004608 ORTHO05D006533 9.5e-181 637.1 420 80.2
Ciclev10008478m.g Citrus clementina HOM05D004608 ORTHO05D006533 3.7e-177 625.2 420 77.9
Lj1C897G12 Lonicera japonica HOM05D004608 ORTHO05D006533 4.9e-177 624.8 420 78.3
SGA_v2.0_scaffold168G38588 Striga asiatica HOM05D004608 ORTHO05D006533 6.3e-177 624.4 420 78.3
Potri.011G166100 Populus trichocarpa HOM05D004608 ORTHO05D006533 5.9e-175 617.8 420 78.6
CAN.G492.45 Capsicum annuum HOM05D004608 ORTHO05D006533 1.7e-174 616.3 420 77.1
Prupe.6G031700 Prunus persica HOM05D004608 ORTHO05D006533 3.8e-174 615.1 420 78.3
TWI38G2408 Tripterygium wilfordii HOM05D004608 ORTHO05D006533 5.0e-174 614.8 419 77.8
MSTRG.7029 Avicennia marina HOM05D004608 ORTHO05D006533 6.6e-174 614.4 422 78.0
Cfa016939 Carpinus fangiana HOM05D004608 ORTHO05D006533 8.6e-174 614.0 420 77.6
TWI38G1265 Tripterygium wilfordii HOM05D004608 ORTHO05D006533 2.5e-173 612.5 419 77.3
QL08p001615 Quercus lobata HOM05D004608 ORTHO05D006533 7.3e-173 610.9 419 76.8
Sopen10g001840 Solanum pennellii HOM05D004608 ORTHO05D006533 1.2e-172 610.1 419 76.4
Solyc10g005890.3 Solanum lycopersicum HOM05D004608 ORTHO05D006533 1.6e-172 609.8 419 76.1
PGR031G2516 Punica granatum HOM05D004608 ORTHO05D006533 2.1e-172 609.4 420 77.6
HanXRQChr11g0334621 Helianthus annuus HOM05D004608 ORTHO05D006533 2.8e-172 609.0 420 76.4
GSVIVG01014786001 Vitis vinifera HOM05D004608 ORTHO05D006533 2.8e-172 609.0 420 76.7
Eucgr.F03661 Eucalyptus grandis HOM05D004608 ORTHO05D006533 4.7e-172 608.2 421 77.0
CsaV3_7G021370 Cucumis sativus L. HOM05D004608 ORTHO05D006533 6.1e-172 607.8 419 77.8
ECA236G2785 Erigeron canadensis HOM05D004608 ORTHO05D006533 6.1e-172 607.8 420 75.5
Potri.001G469300 Populus trichocarpa HOM05D004608 ORTHO05D006533 6.1e-172 607.8 420 77.1
Rhsim06G0233900 Rhododendron simsii HOM05D004608 ORTHO05D006533 8.0e-172 607.4 420 75.7
Sed0022757 Sechium edule HOM05D004608 ORTHO05D006533 1.0e-171 607.1 418 77.8
ClCG09G021670 Citrullus lanatus HOM05D004608 ORTHO05D006533 1.4e-171 606.7 434 75.6
Sabra16G0318300 Salix brachista HOM05D004608 ORTHO05D006533 2.3e-171 605.9 423 76.6
PGSC0003DMG400014406 Solanum tuberosum HOM05D004608 ORTHO05D006533 2.3e-171 605.9 414 75.8
vmacro11628 Vaccinium macrocarpon HOM05D004608 ORTHO05D006533 3.0e-171 605.5 432 75.0
MD03G1039600 Malus domestica HOM05D004608 ORTHO05D006533 4.0e-171 605.1 420 76.9
MD11G1040100 Malus domestica HOM05D004608 ORTHO05D006533 6.8e-171 604.4 420 76.7
HanXRQChr05g0160221 Helianthus annuus HOM05D004608 ORTHO05D006533 8.9e-171 604.0 420 75.5
Atru.chr2.3848 Acer truncatum HOM05D004608 ORTHO05D006533 1.2e-170 603.6 418 75.8
Gohir.A13G130142 Gossypium hirsutum HOM05D004608 ORTHO05D006533 1.2e-170 603.6 420 76.0
Duzib213G0525 Durio zibethinus HOM05D004608 ORTHO05D006533 2.0e-170 602.8 421 77.0
Sed0006020 Sechium edule HOM05D004608 ORTHO05D006533 3.4e-170 602.1 418 76.8
Lsat_1_v5_gn_7_116460 Lactuca sativa HOM05D004608 ORTHO05D006533 9.8e-170 600.5 421 75.8
CiPaw.12G141700 Carya illinoinensis HOM05D004608 ORTHO05D006533 1.3e-169 600.1 420 76.7
DCAR_017596 Daucus carota HOM05D004608 ORTHO05D006533 2.2e-169 599.4 415 75.4
Gohir.D13G133200 Gossypium hirsutum HOM05D004608 ORTHO05D006533 2.9e-169 599.0 420 75.2
Cpa.g.sc12.91 Carica papaya HOM05D004608 ORTHO05D006533 6.4e-169 597.8 420 75.5
Actinidia30368 Actinidia chinensis HOM05D004608 ORTHO05D006533 1.1e-168 597.0 420 74.8
CSS0047803 Camellia sinensis var. sinensis HOM05D004608 ORTHO05D006533 1.1e-168 597.0 420 75.2
THA.LOC104815684 Tarenaya hassleriana HOM05D004608 ORTHO05D006533 1.8e-168 596.3 421 74.8
EL10Ac4g07509 Beta vulgaris HOM05D004608 ORTHO05D006533 5.4e-168 594.7 421 75.1
RcHm_v2.0_Chr5g0075221 Rosa chinensis HOM05D004608 ORTHO05D006533 7.0e-168 594.3 420 75.7
MELO3C013214.2 Cucumis melo HOM05D004608 ORTHO05D006533 1.2e-167 593.6 418 76.6
Gorai.013G149500 Gossypium raimondii HOM05D004608 ORTHO05D006533 1.6e-167 593.2 428 73.8
COL.COLO4_07760 Corchorus olitorius HOM05D004608 ORTHO05D006533 5.9e-167 591.3 419 74.2
Sp3g11470 Schrenkiella parvula HOM05D004608 ORTHO05D006533 5.9e-167 591.3 420 73.3
Thhalv10020839m.g Eutrema salsugineum HOM05D004608 ORTHO05D006533 1.3e-166 590.1 419 72.1
Hund22995 Selenicereus undatus HOM05D004608 ORTHO05D006533 1.7e-166 589.7 420 73.3
CSS0013715 Camellia sinensis var. sinensis HOM05D004608 ORTHO05D006533 2.3e-166 589.3 419 74.9
Glyma.18G072500 Glycine max HOM05D004608 ORTHO05D006533 6.6e-166 587.8 422 73.5
Thecc.07G005400 Theobroma cacao HOM05D004608 ORTHO05D006533 8.6e-166 587.4 419 74.0
AT3G13235 Arabidopsis thaliana HOM05D004608 ORTHO05D006533 1.5e-165 586.6 422 72.5
AL3G25090 Arabidopsis lyrata HOM05D004608 ORTHO05D006533 3.3e-165 585.5 425 72.5
Glyma.08G337500 Glycine max HOM05D004608 ORTHO05D006533 8.0e-164 580.9 422 73.2
Ca_14850_v3 Cicer arietinum L. HOM05D004608 ORTHO05D006533 1.8e-163 579.7 424 72.9
Gohir.D05G386600 Gossypium hirsutum HOM05D004608 ORTHO05D006533 1.8e-163 579.7 420 73.6
CARHR087890 Cardamine hirsuta HOM05D004608 ORTHO05D006533 4.0e-163 578.6 423 71.2
Gorai.009G453300 Gossypium raimondii HOM05D004608 ORTHO05D006533 5.2e-163 578.2 420 73.3
Phvul.006G060300 Phaseolus vulgaris HOM05D004608 ORTHO05D006533 6.8e-163 577.8 421 73.4
CANSAT11G0422 Cannabis sativa HOM05D004608 ORTHO05D006533 8.9e-163 577.4 420 71.9
arahy.Tifrunner.gnm1.ann1.R4UTE8 Arachis hypogaea HOM05D004608 ORTHO05D006533 1.2e-162 577.0 424 71.7
FvH4_3g42010 Fragaria vesca HOM05D004608 ORTHO05D006533 2.0e-162 576.2 420 73.3
Sabra11G0139800 Salix brachista HOM05D004608 ORTHO05D006533 4.4e-162 575.1 457 70.5
Nn1g07694 Nelumbo nucifera HOM05D004608 ORTHO05D006533 5.8e-162 574.7 419 71.4
C03p46240 Brassica napus HOM05D004608 ORTHO05D006533 9.8e-162 573.9 428 69.6
Gohir.A04G003100 Gossypium hirsutum HOM05D004608 ORTHO05D006533 9.8e-162 573.9 420 73.1
BraA03t12964Z Brassica rapa HOM05D004608 ORTHO05D006533 1.3e-161 573.5 421 70.1
MBI14_g00953_MAGBIO Magnolia biondii HOM05D004608 ORTHO05D006533 1.3e-161 573.5 419 70.9
A03p38110 Brassica napus HOM05D004608 ORTHO05D006533 1.7e-161 573.2 421 70.1
BolC3t16895H Brassica oleracea HOM05D004608 ORTHO05D006533 2.9e-161 572.4 429 70.6
AUR62035639 Chenopodium quinoa HOM05D004608 ORTHO05D006533 3.7e-161 572.0 415 72.0
Haze_09894 Corylus avellana HOM05D004608 ORTHO05D006533 3.7e-161 572.0 433 72.1
VMungo0540G0162 Vigna mungo HOM05D004608 ORTHO05D006533 3.7e-161 572.0 422 72.5
AUR62017165 Chenopodium quinoa HOM05D004608 ORTHO05D006533 8.3e-161 570.9 415 72.3
arahy.Tifrunner.gnm1.ann1.EI2AUC Arachis hypogaea HOM05D004608 ORTHO05D006533 3.2e-160 568.9 438 69.6
FAN16G3187 Fragaria x ananassa HOM05D004608 ORTHO05D006533 4.1e-160 568.5 431 71.5
C01p51800 Brassica napus HOM05D004608 ORTHO05D006533 7.0e-160 567.8 421 70.1
FAN25G0703 Fragaria x ananassa HOM05D004608 ORTHO05D006533 2.0e-159 566.2 431 71.2
Nitab4.5_0007214g0010 Nicotiana tabacum HOM05D004608 ORTHO05D006533 4.6e-159 565.1 420 72.1
Os02g0198600 Oryza sativa ssp. japonica HOM05D004608 ORTHO05D006533 1.0e-158 563.9 422 70.9
Lj6g0013957 Lotus japonicus HOM05D004608 ORTHO05D006533 1.3e-158 563.5 420 71.7
TPR.G17932 Trifolium pratense HOM05D004608 ORTHO05D006533 1.3e-158 563.5 421 71.0
Aqoxy4G02317 Aquilegia oxysepala HOM05D004608 ORTHO05D006533 3.0e-158 562.4 419 70.2
FAN11G3108 Fragaria x ananassa HOM05D004608 ORTHO05D006533 3.9e-158 562.0 451 68.3
Peaxi162Scf00219g00158 Petunia axillaris HOM05D004608 ORTHO05D006533 3.9e-158 562.0 424 72.6
Carub.0003s1265 Capsella rubella HOM05D004608 ORTHO05D006533 6.6e-158 561.2 423 70.4
FAN21G2140 Fragaria x ananassa HOM05D004608 ORTHO05D006533 1.5e-157 560.1 451 68.3
Lalb_Chr15g0082461 Lupinus albus HOM05D004608 ORTHO05D006533 1.9e-157 559.7 423 70.9
Aa31LG8G500 Aethionema arabicum HOM05D004608 ORTHO05D006533 4.3e-157 558.5 430 68.6
Dinv40894 Davidia involucrata HOM05D004608 ORTHO05D006533 6.2e-156 554.7 366 79.2
A01p40280 Brassica napus HOM05D004608 ORTHO05D006533 8.1e-156 554.3 422 68.5
BraA01t04064Z Brassica rapa HOM05D004608 ORTHO05D006533 5.2e-155 551.6 422 68.5
PSO541G2325 Papaver somniferum HOM05D004608 ORTHO05D006533 1.4e-152 543.5 419 67.1
ATR0587G001 Amborella trichopoda HOM05D004608 ORTHO05D006533 2.4e-152 542.7 398 71.6
Oeu019694.2 Olea europaea HOM05D004608 ORTHO05D006533 5.4e-152 541.6 434 70.5
HPP92_021912 Vanilla planifolia HOM05D004608 ORTHO05D006533 1.3e-150 537.0 422 67.1
Manes.05G206400 Manihot esculenta HOM05D004608 ORTHO05D006533 3.0e-150 535.8 339 81.1
Hma1.2p1_0193F.1_g084100 Hydrangea macrophylla HOM05D004608 ORTHO05D006533 1.5e-149 533.5 479 63.5
Hma1.2p1_2995F.1_g331425 Hydrangea macrophylla HOM05D004608 ORTHO05D006533 1.5e-149 533.5 479 63.5
THA.LOC104801910 Tarenaya hassleriana HOM05D004608 ORTHO05D006533 1.1e-144 517.3 374 72.2
THA.LOC104810298 Tarenaya hassleriana HOM05D004608 ORTHO05D006533 1.1e-144 517.3 374 72.2
TAR624G0837 Trochodendron aralioides HOM05D004608 ORTHO05D006533 1.6e-143 513.5 422 67.5
Psat5g164640 Pisum sativum HOM05D004608 ORTHO05D006533 3.3e-141 505.8 348 75.6
Zm00001eb205890 Zea mays HOM05D004608 ORTHO05D006533 4.7e-140 501.9 345 74.5
Pp3c4_20890 Physcomitrium patens HOM05D004608 ORTHO05D006533 1.5e-138 496.9 421 62.7
TAR626G0684 Trochodendron aralioides HOM05D004608 ORTHO05D006533 9.9e-138 494.2 317 79.2
BolC1t05127H Brassica oleracea HOM05D004608 ORTHO05D006533 3.9e-134 482.3 427 61.8
Oeu019695.1 Olea europaea HOM05D004608 ORTHO05D006533 2.4e-131 473.0 414 65.2
Nitab4.5_0001622g0040 Nicotiana tabacum HOM05D004608 ORTHO05D006533 4.0e-131 472.2 365 69.9
AagrBONN_evm.TU.Sc2ySwM_117.3155 Anthoceros agrestis HOM05D004608 ORTHO05D006533 2.6e-130 469.5 424 57.1
Duzib268G0270 Durio zibethinus HOM05D004608 ORTHO05D006533 1.1e-128 464.2 420 62.6
Sc03g0011700 Simmondsia chinensis HOM05D004608 ORTHO05D006533 5.8e-114 415.2 274 78.8
Mapoly0030s0110 Marchantia polymorpha HOM05D004608 ORTHO05D006533 4.2e-112 409.1 374 57.5
unitig_899.g15266 Utricularia gibba HOM05D004608 ORTHO05D006533 2.0e-106 390.2 324 67.9
Ah.06g180960 Amaranthus hybridus HOM05D004608 ORTHO05D006533 3.3e-101 372.9 328 63.1
Actinidia10581 Actinidia chinensis HOM05D004608 ORTHO05D006533 4.1e-99 365.9 342 62.6
CBR_g36902 Chara braunii HOM05D004608 ORTHO05D006533 3.0e-86 323.2 317 53.0
MCO11G772 Micromonas commoda HOM05D004608 ORTHO05D006533 1.2e-82 311.2 426 43.2
PRCOL_00000426 Prasinoderma coloniale HOM05D004608 ORTHO05D006533 8.5e-81 305.1 426 42.5
CDE05G0237 Ceratophyllum demersum HOM05D004608 ORTHO05D006533 7.7e-74 282.0 253 60.1
Pp3c17_4800 Physcomitrium patens HOM05D004608 ORTHO05D006533 1.7e-73 280.8 464 39.9
Cre10.g447300 Chlamydomonas reinhardtii HOM05D004608 ORTHO05D006533 1.2e-66 258.1 469 35.2
Aa31LG10G450 Aethionema arabicum HOM05D004608 ORTHO05D006533 7.8e-58 228.8 327 43.4
Cfa022177 Carpinus fangiana HOM05D004608 ORTHO05D006533 2.8e-55 220.3 350 38.0
CDE05G1663 Ceratophyllum demersum HOM05D004608 ORTHO05D006533 4.0e-54 216.5 130 79.2
Aa31LG10G470 Aethionema arabicum HOM05D004608 ORTHO05D006533 2.0e-53 214.2 317 42.3
QL09p009005 Quercus lobata HOM05D000176 ORTHO05D000106 6.4e-52 209.1 133 76.7
unitig_699.g19599 Utricularia gibba HOM05D004608 ORTHO05D006533 6.6e-49 199.1 338 36.4
CSS0026438 Camellia sinensis var. sinensis HOM05D004608 ORTHO05D006533 4.1e-43 179.9 104 82.7
CSS0036658 Camellia sinensis var. sinensis HOM05D004608 ORTHO05D006533 1.2e-42 178.3 104 81.7
Ah.06g180950 Amaranthus hybridus HOM05D004608 ORTHO05D006533 3.6e-39 166.8 132 65.9
AL5G25300 Arabidopsis lyrata HOM05D004608 ORTHO05D038587 8.9e-38 162.2 104 76.9
AUR62020809 Chenopodium quinoa HOM05D004608 ORTHO05D006533 8.1e-31 139.0 121 63.6
QL05p082689 Quercus lobata HOM05D004608 ORTHO05D006533 1.1e-30 138.7 97 70.1
AL3G34310 Arabidopsis lyrata HOM05D004608 ORTHO05D038587 2.7e-26 124.0 129 52.7
MD12G1084200 Malus domestica HOM05D004608 ORTHO05D249232 9.6e-24 115.5 65 86.2
CSS0047513 Camellia sinensis var. sinensis HOM05D004608 ORTHO05D006533 3.8e-20 103.6 58 77.6
CDE05G3009 Ceratophyllum demersum HOM05D004608 ORTHO05D006533 5.4e-19 99.8 73 69.9
AUR62025404 Chenopodium quinoa HOM05D000200 ORTHO05D000262 3.9e-17 93.6 102 52.9
VMungo0954G0002 Vigna mungo HOM05D004608 ORTHO05D432787 3.3e-16 90.5 137 41.6
unitig_899.g15265 Utricularia gibba HOM05D004608 ORTHO05D018951 3.6e-15 87.0 104 54.8
A05p36340 Brassica napus HOM05D004608 ORTHO05D006533 1.2e-13 82.0 65 64.6
CBR_g31527 Chara braunii HOM05D004608 ORTHO05D006533 2.9e-12 77.4 102 46.1
Ca_07476_v3 Cicer arietinum L. HOM05D004608 ORTHO05D018951 5.4e-11 73.2 59 64.4
TAR629G0124 Trochodendron aralioides HOM05D002759 ORTHO05D021026 3.5e-10 70.5 44 77.3
CDE05G1534 Ceratophyllum demersum HOM05D004608 ORTHO05D018951 3.9e-09 67.0 50 60.0
QL09p040375 Quercus lobata HOM05D000176 ORTHO05D000106 3.3e-08 63.9 42 76.2
CDE05G2773 Ceratophyllum demersum HOM05D004608 ORTHO05D018951 9.6e-08 62.4 62 53.2
HanXRQChr05g0144601 Helianthus annuus HOM05D004608 ORTHO05D018951 9.6e-08 62.4 36 80.6
HanXRQChr08g0229721 Helianthus annuus HOM05D004608 ORTHO05D018951 9.6e-08 62.4 36 80.6
HanXRQChr12g0367991 Helianthus annuus HOM05D004608 ORTHO05D018951 9.6e-08 62.4 36 80.6
Glyma.10G116100 Glycine max HOM05D004608 ORTHO05D021061 2.8e-07 60.8 31 83.9
Sopen07g004930 Solanum pennellii HOM05D000004 ORTHO05D000002 3.7e-07 60.5 157 27.4
EL10Ac5g11554 Beta vulgaris HOM05D003131 ORTHO05D003761 4.8e-07 60.1 100 44.0
Sopen12g018380 Solanum pennellii HOM05D000691 ORTHO05D000378 4.8e-07 60.1 119 29.4
arahy.Tifrunner.gnm1.ann1.C1KQ7I Arachis hypogaea HOM05D004608 ORTHO05D006012 6.2e-07 59.7 57 56.1
Sopen04g010080 Solanum pennellii HOM05D000004 ORTHO05D000002 6.2e-07 59.7 119 29.4
Sopen07g021860 Solanum pennellii HOM05D000004 ORTHO05D000002 6.2e-07 59.7 119 29.4
Sopen07g015160 Solanum pennellii HOM05D000691 ORTHO05D000378 8.1e-07 59.3 119 29.4
HanXRQChr16g0512931 Helianthus annuus HOM05D004608 ORTHO05D018951 1.4e-06 58.5 36 80.6
Sopen09g023520 Solanum pennellii HOM05D000004 ORTHO05D000002 1.4e-06 58.5 119 29.4
MD05G1213500 Malus domestica HOM05D004608 ORTHO05D246297 2.4e-06 57.8 63 55.6
MD05G1213200 Malus domestica HOM05D004608 ORTHO05D006533 3.1e-06 57.4 64 54.7
Sopen04g014250 Solanum pennellii HOM05D000004 ORTHO05D000378 4.0e-06 57.0 119 28.6


User provided reference genes

Program Settings