Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu026608.1 Olea europaea HOM05D006601 ORTHO05D008281 5.5e-95 351.3 221 100.0
Oeu030223.2 Olea europaea HOM05D006601 ORTHO05D008281 1.1e-82 310.5 171 93.0
Cc02_g09570 Coffea canephora HOM05D006601 ORTHO05D008281 1.4e-71 273.5 170 80.0
SalBow3G0796 Salvia bowleyana HOM05D006601 ORTHO05D008281 2.7e-70 269.2 229 72.9
SGA_v2.0_scaffold62G21313 Striga asiatica HOM05D006601 ORTHO05D008281 1.0e-69 267.3 172 79.1
MSTRG.9054 Avicennia marina HOM05D006601 ORTHO05D008281 2.3e-69 266.2 171 79.5
CAN.G1417.5 Capsicum annuum HOM05D006601 ORTHO05D008281 1.7e-67 260.0 175 74.9
Solyc11g006760.3 Solanum lycopersicum HOM05D006601 ORTHO05D008281 1.1e-66 257.3 174 73.6
Sopen11g002690 Solanum pennellii HOM05D006601 ORTHO05D008281 1.1e-66 257.3 174 73.6
unitig_899.g14469 Utricularia gibba HOM05D006601 ORTHO05D008281 1.4e-66 256.9 169 78.1
Rhsim09G0141800 Rhododendron simsii HOM05D006601 ORTHO05D008281 4.1e-66 255.4 172 77.3
Dinv12840 Davidia involucrata HOM05D006601 ORTHO05D008281 9.1e-66 254.2 171 76.0
PGSC0003DMG400023966 Solanum tuberosum HOM05D006601 ORTHO05D008281 1.2e-65 253.8 175 73.1
CiPaw.13G041000 Carya illinoinensis HOM05D006601 ORTHO05D008281 1.6e-65 253.4 222 72.5
CSS0000414 Camellia sinensis var. sinensis HOM05D006601 ORTHO05D008281 2.0e-65 253.1 171 76.6
Potri.010G240300 Populus trichocarpa HOM05D006601 ORTHO05D008281 2.0e-65 253.1 172 73.3
Nitab4.5_0009484g0010 Nicotiana tabacum HOM05D006601 ORTHO05D008281 2.6e-65 252.7 175 73.7
Peaxi162Scf00125g00234 Petunia axillaris HOM05D006601 ORTHO05D008281 3.5e-65 252.3 172 73.3
DCAR_006335 Daucus carota HOM05D006601 ORTHO05D008281 4.5e-65 251.9 172 75.6
HanXRQChr11g0321661 Helianthus annuus HOM05D006601 ORTHO05D008281 1.3e-64 250.4 174 73.6
Duzib114G0052 Durio zibethinus HOM05D006601 ORTHO05D008281 2.2e-64 249.6 168 73.8
Glyma.01G052400 Glycine max HOM05D006601 ORTHO05D008281 2.2e-64 249.6 172 75.0
PSO339G2358 Papaver somniferum HOM05D006601 ORTHO05D008281 2.2e-64 249.6 173 73.4
PGR044G2546 Punica granatum HOM05D006601 ORTHO05D008281 2.9e-64 249.2 172 72.7
Migut.F00866 Erythranthe guttata HOM05D006601 ORTHO05D008281 5.0e-64 248.4 173 75.7
GSVIVG01010682001 Vitis vinifera HOM05D006601 ORTHO05D008281 5.0e-64 248.4 172 73.3
Phvul.002G091600 Phaseolus vulgaris HOM05D006601 ORTHO05D008281 6.5e-64 248.1 171 73.7
Glyma.02G110700 Glycine max HOM05D006601 ORTHO05D008281 8.5e-64 247.7 173 74.0
vmacro10311 Vaccinium macrocarpon HOM05D006601 ORTHO05D008281 8.5e-64 247.7 192 69.8
ECA232G0968 Erigeron canadensis HOM05D006601 ORTHO05D008281 1.5e-63 246.9 153 81.7
TAR633G2162 Trochodendron aralioides HOM05D006601 ORTHO05D008281 1.5e-63 246.9 172 73.3
Psat2g116120 Pisum sativum HOM05D006601 ORTHO05D008281 2.5e-63 246.1 171 73.7
Thecc.10G114200 Theobroma cacao HOM05D006601 ORTHO05D008281 2.5e-63 246.1 172 72.1
Prupe.5G030400 Prunus persica HOM05D006601 ORTHO05D008281 3.2e-63 245.7 172 71.5
Cfa010329 Carpinus fangiana HOM05D006601 ORTHO05D008281 5.5e-63 245.0 171 74.9
QL04p046797 Quercus lobata HOM05D006601 ORTHO05D008281 5.5e-63 245.0 172 73.3
QL04p047245 Quercus lobata HOM05D006601 ORTHO05D008281 5.5e-63 245.0 172 73.3
Gohir.A05G287400 Gossypium hirsutum HOM05D006601 ORTHO05D008281 7.2e-63 244.6 171 71.3
Eucgr.J00269 Eucalyptus grandis HOM05D006601 ORTHO05D008281 1.2e-62 243.8 170 74.7
Manes.10G062700 Manihot esculenta HOM05D006601 ORTHO05D008281 1.6e-62 243.4 176 70.5
Potri.008G019100 Populus trichocarpa HOM05D006601 ORTHO05D008281 1.6e-62 243.4 172 70.3
Lj2g0012177 Lotus japonicus HOM05D006601 ORTHO05D008281 2.1e-62 243.0 171 73.1
Lalb_Chr10g0098441 Lupinus albus HOM05D006601 ORTHO05D008281 2.7e-62 242.7 179 70.9
Gohir.D05G288500 Gossypium hirsutum HOM05D006601 ORTHO05D008281 3.6e-62 242.3 171 70.2
Gorai.009G303600 Gossypium raimondii HOM05D006601 ORTHO05D008281 3.6e-62 242.3 171 70.2
Lsat_1_v5_gn_0_8161 Lactuca sativa HOM05D006601 ORTHO05D008281 3.6e-62 242.3 174 71.3
arahy.Tifrunner.gnm1.ann1.VBS9AQ Arachis hypogaea HOM05D006601 ORTHO05D008281 6.1e-62 241.5 173 72.8
Aqoxy2G01120 Aquilegia oxysepala HOM05D006601 ORTHO05D008281 1.4e-61 240.4 176 71.6
Ca_04833_v3 Cicer arietinum L. HOM05D006601 ORTHO05D008281 3.0e-61 239.2 171 71.3
Medtr5g042160 Medicago truncatula HOM05D006601 ORTHO05D008281 1.1e-60 237.3 171 71.3
Hund22273 Selenicereus undatus HOM05D006601 ORTHO05D008281 1.5e-60 236.9 143 79.7
HPP92_000012 Vanilla planifolia HOM05D006601 ORTHO05D008281 1.5e-60 236.9 156 76.9
RcHm_v2.0_Chr6g0269151 Rosa chinensis HOM05D006601 ORTHO05D008281 2.6e-60 236.1 172 69.2
MBI17_g13115_MAGBIO Magnolia biondii HOM05D006601 ORTHO05D008281 3.3e-60 235.7 152 79.6
COL.COLO4_03655 Corchorus olitorius HOM05D006601 ORTHO05D008281 4.4e-60 235.3 174 70.1
MD06G1038200 Malus domestica HOM05D006601 ORTHO05D008281 5.7e-60 235.0 222 70.3
FAN24G1745 Fragaria x ananassa HOM05D006601 ORTHO05D008281 9.7e-60 234.2 175 70.3
Atru.chr12.1047 Acer truncatum HOM05D006601 ORTHO05D008281 1.3e-59 233.8 172 68.0
THA.LOC104823558 Tarenaya hassleriana HOM05D006601 ORTHO05D008281 1.7e-59 233.4 224 64.3
Os08g0558700 Oryza sativa ssp. japonica HOM05D006601 ORTHO05D008281 2.2e-59 233.0 143 79.7
FvH4_2g10940 Fragaria vesca HOM05D006601 ORTHO05D008281 2.8e-59 232.6 175 69.7
ClCG08G008320 Citrullus lanatus HOM05D006601 ORTHO05D008281 3.7e-59 232.3 143 81.1
CsaV3_6G004290 Cucumis sativus L. HOM05D006601 ORTHO05D008281 3.7e-59 232.3 172 71.5
TPR.G31604 Trifolium pratense HOM05D006601 ORTHO05D008281 8.2e-59 231.1 134 83.6
TWI38G1517 Tripterygium wilfordii HOM05D006601 ORTHO05D008281 1.4e-58 230.3 143 75.5
Carub.0005s1858 Capsella rubella HOM05D006601 ORTHO05D008281 1.8e-58 229.9 154 72.7
RcHm_v2.0_Chr2g0160691 Rosa chinensis HOM05D006601 ORTHO05D008281 1.8e-58 229.9 172 69.2
Sp5g10040 Schrenkiella parvula HOM05D006601 ORTHO05D008281 1.8e-58 229.9 151 74.8
MELO3C019900.2 Cucumis melo HOM05D006601 ORTHO05D008281 3.1e-58 229.2 143 80.4
Sed0022988 Sechium edule HOM05D006601 ORTHO05D008281 3.1e-58 229.2 173 71.1
AL5G32810 Arabidopsis lyrata HOM05D006601 ORTHO05D008281 5.3e-58 228.4 154 72.7
AT3G52220 Arabidopsis thaliana HOM05D006601 ORTHO05D008281 9.1e-58 227.6 151 73.5
CARHR161980 Cardamine hirsuta HOM05D006601 ORTHO05D008281 1.2e-57 227.3 154 72.1
Thhalv10010678m.g Eutrema salsugineum HOM05D006601 ORTHO05D008281 1.2e-57 227.3 151 72.8
AUR62041519 Chenopodium quinoa HOM05D006601 ORTHO05D008281 2.7e-57 226.1 171 65.5
A09p45280 Brassica napus HOM05D006601 ORTHO05D008281 4.5e-57 225.3 151 72.2
BraA09t39991Z Brassica rapa HOM05D006601 ORTHO05D008281 4.5e-57 225.3 151 72.2
Nn6g34864 Nelumbo nucifera HOM05D006601 ORTHO05D008281 7.7e-57 224.6 131 84.7
C08p27460 Brassica napus HOM05D006601 ORTHO05D008281 1.0e-56 224.2 143 74.8
BolC8t50363H Brassica oleracea HOM05D006601 ORTHO05D008281 1.0e-56 224.2 143 74.8
FAN20G1775 Fragaria x ananassa HOM05D006601 ORTHO05D008281 1.7e-56 223.4 130 83.1
Aa31LG10G7330 Aethionema arabicum HOM05D006601 ORTHO05D008281 2.9e-56 222.6 134 79.9
Ciclev10016593m.g Citrus clementina HOM05D006601 ORTHO05D008281 8.5e-56 221.1 158 72.2
Lj3A925T73 Lonicera japonica HOM05D006601 ORTHO05D008281 1.2e-54 217.2 150 74.7
Sabra10G0188100 Salix brachista HOM05D006601 ORTHO05D008281 2.1e-54 216.5 236 52.1
FAN15G0841 Fragaria x ananassa HOM05D006601 ORTHO05D008281 6.1e-54 214.9 176 64.8
arahy.Tifrunner.gnm1.ann1.0XG3CD Arachis hypogaea HOM05D006601 ORTHO05D008281 2.0e-52 209.9 173 67.1
SEGI_26123 Sequoiadendron giganteum HOM05D006601 ORTHO05D008281 2.6e-52 209.5 157 66.9
TWI63G1188 Tripterygium wilfordii HOM05D006601 ORTHO05D008281 1.6e-49 200.3 154 64.3
ATR0776G086 Amborella trichopoda HOM05D006601 ORTHO05D008281 2.5e-47 193.0 149 67.1
SMO367G0990 Selaginella moellendorffii HOM05D006601 ORTHO05D008281 3.4e-44 182.6 181 58.6
Pp3c1_22490 Physcomitrium patens HOM05D006601 ORTHO05D008281 4.4e-44 182.2 138 67.4
Mapoly0044s0087 Marchantia polymorpha HOM05D006601 ORTHO05D008281 7.0e-42 174.9 136 61.0
CDE04G0959 Ceratophyllum demersum HOM05D006601 ORTHO05D008281 2.0e-41 173.3 174 55.7
Actinidia31106 Actinidia chinensis HOM05D006601 ORTHO05D008281 2.5e-39 166.4 92 84.8
Nitab4.5_0002586g0010 Nicotiana tabacum HOM05D006601 ORTHO05D008281 4.3e-39 165.6 132 68.9
Haze_03300 Corylus avellana HOM05D006601 ORTHO05D008281 1.8e-34 150.2 99 78.8
AUR62042084 Chenopodium quinoa HOM05D006601 ORTHO05D008281 7.8e-33 144.8 171 49.1
Sc09g0005300 Simmondsia chinensis HOM05D006601 ORTHO05D008281 7.8e-33 144.8 128 62.5
BcaC07g39592 Brassica carinata HOM05D006601 ORTHO05D008281 8.6e-32 141.4 149 53.7
MCO05G050 Micromonas commoda HOM05D006601 ORTHO05D008281 7.5e-28 128.3 135 53.3
PSO692G0001 Papaver somniferum HOM05D006601 ORTHO05D008281 2.9e-27 126.3 111 64.9
PSO801G0555 Papaver somniferum HOM05D006601 ORTHO05D008281 2.9e-27 126.3 111 64.9
Cre18.g749347 Chlamydomonas reinhardtii HOM05D006601 ORTHO05D008281 6.0e-25 118.6 146 47.3
Aqoxy2G01116 Aquilegia oxysepala HOM05D006601 ORTHO05D008281 1.2e-20 104.4 101 61.4
Zm00001eb039400 Zea mays HOM05D006601 ORTHO05D008281 2.0e-20 103.6 95 63.2
Ah.06g186680 Amaranthus hybridus HOM05D006601 ORTHO05D008281 4.9e-19 99.0 64 78.1
CiPaw.14G033700 Carya illinoinensis HOM05D006601 ORTHO05D008281 3.2e-18 96.3 80 68.8
Cfa024623 Carpinus fangiana HOM05D006601 ORTHO05D008281 6.0e-17 92.0 108 43.5
Lsat_1_v5_gn_4_8660 Lactuca sativa HOM05D006601 ORTHO05D008281 4.0e-13 79.3 65 64.6
Hma1.2p1_1491F.1_g286720 Hydrangea macrophylla HOM05D006601 ORTHO05D008281 1.3e-08 64.3 37 83.8
EL10Ac7g17292 Beta vulgaris HOM05D006601 ORTHO05D008281 2.3e-08 63.5 31 80.6
BcaC02g09271 Brassica carinata HOM05D006601 ORTHO05D008281 8.6e-08 61.6 77 54.5
Aqoxy2G01117 Aquilegia oxysepala HOM05D006601 ORTHO05D008281 1.9e-07 60.5 31 74.2
AagrBONN_evm.TU.Sc2ySwM_228.2727 Anthoceros agrestis HOM05D006601 ORTHO05D008281 9.6e-07 58.2 59 52.5


User provided reference genes

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