Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu026567.1 Olea europaea HOM05D005926 ORTHO05D007001 5.6e-215 750.7 403 100.0
SalBow6G1645 Salvia bowleyana HOM05D005926 ORTHO05D007001 4.4e-50 203.0 408 38.7
Cc02_g10060 Coffea canephora HOM05D005926 ORTHO05D007001 4.1e-40 169.9 408 35.0
Migut.F00893 Erythranthe guttata HOM05D005926 ORTHO05D007001 7.0e-40 169.1 409 36.7
Dinv30648 Davidia involucrata HOM05D005926 ORTHO05D007001 6.1e-36 156.0 466 30.0
Peaxi162Scf00004g00119 Petunia axillaris HOM05D005926 ORTHO05D007001 6.0e-31 139.4 402 28.6
CSS0015422 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 1.5e-29 134.8 418 31.1
CSS0031564 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 3.3e-29 133.7 418 31.1
GSVIVG01034734001 Vitis vinifera HOM05D005926 ORTHO05D007001 3.3e-29 133.7 472 27.8
Nitab4.5_0002878g0030 Nicotiana tabacum HOM05D005926 ORTHO05D007001 5.6e-29 132.9 395 29.6
Dinv20819 Davidia involucrata HOM05D005926 ORTHO05D007001 6.2e-28 129.4 308 34.1
CiPaw.14G029200 Carya illinoinensis HOM05D005926 ORTHO05D007001 6.8e-27 125.9 442 31.2
Haze_02594 Corylus avellana HOM05D005926 ORTHO05D007001 2.0e-26 124.4 425 33.4
Nitab4.5_0001027g0040 Nicotiana tabacum HOM05D005926 ORTHO05D007001 2.2e-25 120.9 432 28.2
Nitab4.5_0012334g0010 Nicotiana tabacum HOM05D005926 ORTHO05D007001 9.2e-24 115.5 394 28.2
Sopen05g033810 Solanum pennellii HOM05D005926 ORTHO05D007001 1.6e-23 114.8 421 28.7
PGSC0003DMG400023487 Solanum tuberosum HOM05D005926 ORTHO05D007001 1.6e-23 114.8 421 29.0
QL04p042256 Quercus lobata HOM05D005926 ORTHO05D007001 4.6e-23 113.2 419 30.5
CSS0031315 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 6.0e-23 112.8 354 29.9
Lj2C28T9 Lonicera japonica HOM05D005926 ORTHO05D007001 1.3e-22 111.7 351 30.5
Solyc05g055360.4 Solanum lycopersicum HOM05D005926 ORTHO05D007001 3.0e-22 110.5 421 28.7
Duzib128G1763 Durio zibethinus HOM05D005926 ORTHO05D007001 3.9e-22 110.2 433 27.3
Sabra08G0016800 Salix brachista HOM05D005926 ORTHO05D007001 5.0e-22 109.8 303 32.3
CSS0037332 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 2.5e-21 107.5 361 30.2
Sed0000046 Sechium edule HOM05D005926 ORTHO05D007001 4.3e-21 106.7 412 26.9
Atru.chr12.975 Acer truncatum HOM05D005926 ORTHO05D007001 1.2e-20 105.1 421 28.0
DCAR_014349 Daucus carota HOM05D005926 ORTHO05D007001 1.2e-20 105.1 414 28.5
Nitab4.5_0003396g0030 Nicotiana tabacum HOM05D005926 ORTHO05D007001 2.8e-20 104.0 341 29.0
Actinidia28534 Actinidia chinensis HOM05D005926 ORTHO05D007001 4.7e-20 103.2 465 26.5
Duzib106G0448 Durio zibethinus HOM05D005926 ORTHO05D007001 1.1e-19 102.1 439 26.7
Manes.07G090100 Manihot esculenta HOM05D005926 ORTHO05D007001 1.1e-19 102.1 424 29.2
SGA_v2.0_scaffold62G21348 Striga asiatica HOM05D005926 ORTHO05D007001 1.8e-19 101.3 299 34.8
Rhsim03G0105700 Rhododendron simsii HOM05D005926 ORTHO05D007001 3.1e-19 100.5 423 29.6
Ciclev10030805m.g Citrus clementina HOM05D005926 ORTHO05D007001 1.2e-18 98.6 386 26.4
MD02G1248000 Malus domestica HOM05D005926 ORTHO05D007001 1.2e-18 98.6 483 27.5
vmacro07227 Vaccinium macrocarpon HOM05D005926 ORTHO05D007001 2.0e-18 97.8 413 29.8
CsaV3_6G004110 Cucumis sativus L. HOM05D005926 ORTHO05D007001 3.4e-18 97.1 417 28.8
Prupe.2G085400 Prunus persica HOM05D005926 ORTHO05D007001 5.8e-18 96.3 452 27.7
MELO3C019887.2 Cucumis melo HOM05D005926 ORTHO05D007001 7.5e-18 95.9 417 29.0
Thecc.10G111000 Theobroma cacao HOM05D005926 ORTHO05D007001 9.9e-18 95.5 431 25.8
ClCG08G008140 Citrullus lanatus HOM05D005926 ORTHO05D007001 1.3e-17 95.1 412 28.4
Potri.008G025000 Populus trichocarpa HOM05D005926 ORTHO05D007001 2.2e-17 94.4 417 28.3
TWI63G0673 Tripterygium wilfordii HOM05D005926 ORTHO05D007001 2.2e-17 94.4 220 33.2
Gorai.012G020100 Gossypium raimondii HOM05D005926 ORTHO05D007001 3.7e-17 93.6 471 25.3
COL.COLO4_06813 Corchorus olitorius HOM05D005926 ORTHO05D007001 8.3e-17 92.4 429 26.1
Gohir.D04G017400 Gossypium hirsutum HOM05D005926 ORTHO05D007001 1.4e-16 91.7 453 24.7
Sabra10G0182600 Salix brachista HOM05D005926 ORTHO05D007001 5.4e-16 89.7 227 34.8
TAR623G1319 Trochodendron aralioides HOM05D005926 ORTHO05D007001 9.2e-16 89.0 422 26.8
Gohir.A05G398500 Gossypium hirsutum HOM05D005926 ORTHO05D007001 1.6e-15 88.2 451 24.4
Actinidia18581 Actinidia chinensis HOM05D005926 ORTHO05D007001 1.3e-14 85.1 264 30.3
FAN10G2760 Fragaria x ananassa HOM05D005926 ORTHO05D007001 1.3e-14 85.1 310 29.4
FvH4_7g05860 Fragaria vesca HOM05D005926 ORTHO05D007001 5.1e-14 83.2 307 28.0
FAN03G1852 Fragaria x ananassa HOM05D005926 ORTHO05D007001 1.1e-13 82.0 307 27.7
CANSAT56G4130 Cannabis sativa HOM05D005926 ORTHO05D007001 2.5e-13 80.9 427 27.2
Ca_10497_v3 Cicer arietinum L. HOM05D005926 ORTHO05D007001 3.3e-13 80.5 419 27.0
Lalb_Chr03g0036371 Lupinus albus HOM05D005926 ORTHO05D007001 5.6e-13 79.7 408 27.9
MD07G1068100 Malus domestica HOM05D005926 ORTHO05D007001 5.6e-13 79.7 307 27.7
RcHm_v2.0_Chr1g0333121 Rosa chinensis HOM05D005926 ORTHO05D007001 5.6e-13 79.7 294 27.2
Aqoxy4G02869 Aquilegia oxysepala HOM05D005926 ORTHO05D007001 7.3e-13 79.3 401 25.4
Phvul.007G104500 Phaseolus vulgaris HOM05D005926 ORTHO05D007001 3.6e-12 77.0 406 26.4
EL10Ac4g08669 Beta vulgaris HOM05D005926 ORTHO05D007001 2.4e-11 74.3 405 26.7
VMungo0720G0267 Vigna mungo HOM05D005926 ORTHO05D007001 3.1e-11 73.9 323 28.8
Cpa.g.sc19.23 Carica papaya HOM05D005926 ORTHO05D007001 5.2e-11 73.2 454 24.9
PGSC0003DMG400027309 Solanum tuberosum HOM05D005926 ORTHO05D007001 1.2e-10 72.0 394 24.1
Ah.04g163700 Amaranthus hybridus HOM05D005926 ORTHO05D007001 2.6e-10 70.9 288 27.1
CAN.G1550.12 Capsicum annuum HOM05D005926 ORTHO05D007001 2.6e-10 70.9 171 32.7
Glyma.20G187800 Glycine max HOM05D005926 ORTHO05D007001 3.4e-10 70.5 403 24.8
Nn6g35019 Nelumbo nucifera HOM05D005926 ORTHO05D007001 9.9e-10 68.9 362 26.8
Lj5g0002236 Lotus japonicus HOM05D005926 ORTHO05D007001 2.2e-09 67.8 276 29.3
TPR.G2562 Trifolium pratense HOM05D005926 ORTHO05D007001 6.4e-09 66.2 273 26.4
Medtr1g492840 Medicago truncatula HOM05D005926 ORTHO05D007001 1.9e-08 64.7 415 25.8
PGR142G4330 Punica granatum HOM05D005926 ORTHO05D007001 1.9e-08 64.7 319 26.0
Aqoxy2G01361 Aquilegia oxysepala HOM05D005926 ORTHO05D007001 2.4e-08 64.3 240 30.4
Glyma.10G202600 Glycine max HOM05D005926 ORTHO05D007001 4.1e-08 63.5 410 25.4
AUR62041545 Chenopodium quinoa HOM05D005926 ORTHO05D007001 9.2e-08 62.4 413 25.2
Lsat_1_v5_gn_6_90261 Lactuca sativa HOM05D005926 ORTHO05D007001 1.2e-07 62.0 256 28.1
ECA232G4290 Erigeron canadensis HOM05D005926 ORTHO05D007001 4.6e-07 60.1 298 25.8
Eucgr.G02709 Eucalyptus grandis HOM05D005926 ORTHO05D007001 7.8e-07 59.3 401 24.9
HanXRQChr05g0147041 Helianthus annuus HOM05D005926 ORTHO05D007001 7.8e-07 59.3 255 27.8
Psat6g176680 Pisum sativum HOM05D005926 ORTHO05D007001 1.3e-06 58.5 297 25.6
arahy.Tifrunner.gnm1.ann1.9BC44J Arachis hypogaea HOM05D005926 ORTHO05D007001 2.3e-06 57.8 268 28.4
TAR369G1114 Trochodendron aralioides HOM05D005926 ORTHO05D007001 3.0e-06 57.4 517 23.0


User provided reference genes

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