Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu026556.1 Olea europaea HOM05D004192 ORTHO05D004917 5.3e-139 497.7 247 100.0
Dinv31284 Davidia involucrata HOM05D004192 ORTHO05D004917 6.5e-97 357.8 250 74.4
Rhsim03G0109700 Rhododendron simsii HOM05D004192 ORTHO05D004917 2.7e-95 352.4 250 72.4
CSS0018543 Camellia sinensis var. sinensis HOM05D004192 ORTHO05D004917 1.4e-94 350.1 250 71.6
CSS0020257 Camellia sinensis var. sinensis HOM05D004192 ORTHO05D004917 3.0e-94 349.0 250 71.6
Hma1.2p1_0492F.1_g164750 Hydrangea macrophylla HOM05D004192 ORTHO05D004917 6.8e-94 347.8 247 72.9
Cc02_g10300 Coffea canephora HOM05D004192 ORTHO05D004917 2.6e-93 345.9 249 69.1
TAR623G0905 Trochodendron aralioides HOM05D004192 ORTHO05D004917 1.3e-92 343.6 250 69.2
MSTRG.8112 Avicennia marina HOM05D004192 ORTHO05D004917 1.7e-92 343.2 244 69.7
Migut.F01661 Erythranthe guttata HOM05D004192 ORTHO05D004917 2.4e-91 339.3 248 68.1
FvH4_7g06400 Fragaria vesca HOM05D004192 ORTHO05D004917 4.5e-90 335.1 249 67.9
CANSAT56G0904 Cannabis sativa HOM05D004192 ORTHO05D004917 7.7e-90 334.3 250 67.2
Eucgr.J01026 Eucalyptus grandis HOM05D004192 ORTHO05D004917 1.3e-89 333.6 248 67.7
FAN03G2327 Fragaria x ananassa HOM05D004192 ORTHO05D004917 1.3e-89 333.6 249 67.5
FAN06G5118 Fragaria x ananassa HOM05D004192 ORTHO05D004917 1.3e-89 333.6 249 67.5
FAN10G1549 Fragaria x ananassa HOM05D004192 ORTHO05D004917 1.3e-89 333.6 249 67.5
Haze_02630 Corylus avellana HOM05D004192 ORTHO05D004917 2.9e-89 332.4 249 69.9
Manes.10G054700 Manihot esculenta HOM05D004192 ORTHO05D004917 1.9e-88 329.7 248 66.9
Prupe.2G090700 Prunus persica HOM05D004192 ORTHO05D004917 3.6e-87 325.5 249 67.5
SGA_v2.0_scaffold62G21320 Striga asiatica HOM05D004192 ORTHO05D004917 3.6e-87 325.5 256 63.7
FAN01G1656 Fragaria x ananassa HOM05D004192 ORTHO05D004917 6.1e-87 324.7 249 66.3
TWI38G0502 Tripterygium wilfordii HOM05D004192 ORTHO05D004917 6.1e-87 324.7 247 67.6
Potri.010G233600 Populus trichocarpa HOM05D004192 ORTHO05D004917 1.4e-86 323.6 245 66.1
RcHm_v2.0_Chr1g0334491 Rosa chinensis HOM05D004192 ORTHO05D004917 1.2e-85 320.5 249 66.3
Peaxi162Scf00398g00058 Petunia axillaris HOM05D004192 ORTHO05D004917 1.5e-85 320.1 244 65.6
Lsat_1_v5_gn_8_23081 Lactuca sativa HOM05D004192 ORTHO05D004917 2.0e-85 319.7 251 64.9
COL.COLO4_34171 Corchorus olitorius HOM05D004192 ORTHO05D004917 4.4e-85 318.5 252 64.3
HanXRQChr08g0218151 Helianthus annuus HOM05D004192 ORTHO05D004917 7.5e-85 317.8 251 62.9
PGR044G0968 Punica granatum HOM05D004192 ORTHO05D004917 2.8e-84 315.8 253 66.0
Hund22302 Selenicereus undatus HOM05D004192 ORTHO05D004917 6.3e-84 314.7 244 66.0
Lj3A933G36 Lonicera japonica HOM05D004192 ORTHO05D004917 1.8e-83 313.2 248 63.7
ECA233G2766 Erigeron canadensis HOM05D004192 ORTHO05D004917 2.4e-83 312.8 252 64.3
MD07G1072600 Malus domestica HOM05D004192 ORTHO05D004917 2.4e-83 312.8 250 64.8
Potri.008G026900 Populus trichocarpa HOM05D004192 ORTHO05D004917 3.1e-83 312.4 246 64.6
MD02G1244600 Malus domestica HOM05D004192 ORTHO05D004917 5.4e-83 311.6 249 64.3
Thecc.10G097700 Theobroma cacao HOM05D004192 ORTHO05D004917 5.4e-83 311.6 249 64.3
Gorai.008G097500 Gossypium raimondii HOM05D004192 ORTHO05D004917 7.0e-83 311.2 245 63.3
Nitab4.5_0003408g0020 Nicotiana tabacum HOM05D004192 ORTHO05D004917 7.0e-83 311.2 245 64.1
Nitab4.5_0000593g0020 Nicotiana tabacum HOM05D004192 ORTHO05D004917 1.2e-82 310.5 245 63.7
Sabra10G0181200 Salix brachista HOM05D004192 ORTHO05D004917 1.6e-82 310.1 244 63.5
Nn2g13965 Nelumbo nucifera HOM05D004192 ORTHO05D004917 2.7e-82 309.3 250 64.0
Duzib114G0707 Durio zibethinus HOM05D004192 ORTHO05D004917 4.5e-82 308.5 249 63.9
Gohir.D12G087300 Gossypium hirsutum HOM05D004192 ORTHO05D004917 4.5e-82 308.5 245 62.9
Sabra08G0018400 Salix brachista HOM05D004192 ORTHO05D004917 4.5e-82 308.5 245 64.5
Atru.chr12.952 Acer truncatum HOM05D004192 ORTHO05D004917 1.0e-81 307.4 248 64.5
Duzib128G0631 Durio zibethinus HOM05D004192 ORTHO05D004917 2.3e-81 306.2 249 63.5
Nn6g35085 Nelumbo nucifera HOM05D004192 ORTHO05D004917 6.6e-81 304.7 250 63.6
MBI17_g20218_MAGBIO Magnolia biondii HOM05D004192 ORTHO05D004917 1.5e-80 303.5 250 61.6
CAN.G135.58 Capsicum annuum HOM05D004192 ORTHO05D004917 1.9e-80 303.1 245 62.9
Gohir.D01G118800 Gossypium hirsutum HOM05D004192 ORTHO05D004917 1.9e-80 303.1 250 62.4
Gorai.002G144900 Gossypium raimondii HOM05D004192 ORTHO05D004917 1.9e-80 303.1 250 62.4
HanXRQChr12g0368431 Helianthus annuus HOM05D004192 ORTHO05D004917 2.5e-80 302.8 254 61.4
AUR62041537 Chenopodium quinoa HOM05D004192 ORTHO05D004917 9.5e-80 300.8 246 61.4
ClCG08G008030 Citrullus lanatus HOM05D004192 ORTHO05D004917 9.5e-80 300.8 249 61.8
Gohir.A12G088900 Gossypium hirsutum HOM05D004192 ORTHO05D004917 1.2e-79 300.4 245 61.6
Sed0026233 Sechium edule HOM05D004192 ORTHO05D004917 2.8e-79 299.3 249 61.8
Gohir.A01G129200 Gossypium hirsutum HOM05D004192 ORTHO05D004917 3.6e-79 298.9 250 62.0
Sopen11g003530 Solanum pennellii HOM05D004192 ORTHO05D004917 6.1e-79 298.1 245 61.6
Lalb_Chr02g0151281 Lupinus albus HOM05D004192 ORTHO05D004917 1.8e-78 296.6 249 61.4
DCAR_019044 Daucus carota HOM05D004192 ORTHO05D004917 4.0e-78 295.4 247 63.2
MELO3C019875.2 Cucumis melo HOM05D004192 ORTHO05D004917 6.8e-78 294.7 252 60.3
Solyc11g007670.3 Solanum lycopersicum HOM05D004192 ORTHO05D004917 6.8e-78 294.7 245 61.2
CsaV3_2G032910 Cucumis sativus L. HOM05D004192 ORTHO05D004917 8.9e-78 294.3 252 60.3
EL10Ac4g08605 Beta vulgaris HOM05D004192 ORTHO05D004917 1.2e-77 293.9 245 60.0
PGSC0003DMG402027320 Solanum tuberosum HOM05D004192 ORTHO05D004917 2.0e-77 293.1 245 60.0
Sed0024945 Sechium edule HOM05D004192 ORTHO05D004917 2.6e-77 292.7 248 60.5
AUR62041535 Chenopodium quinoa HOM05D004192 ORTHO05D004917 5.7e-77 291.6 245 60.8
Ah.04g163610 Amaranthus hybridus HOM05D004192 ORTHO05D004917 7.5e-77 291.2 247 59.1
arahy.Tifrunner.gnm1.ann1.CA0PQ2 Arachis hypogaea HOM05D004192 ORTHO05D004917 1.1e-75 287.3 252 57.5
Aqoxy1G00968 Aquilegia oxysepala HOM05D004192 ORTHO05D004917 7.0e-75 284.6 245 58.0
PSO384G3766 Papaver somniferum HOM05D004192 ORTHO05D004917 3.5e-74 282.3 246 57.7
PSO339G1524 Papaver somniferum HOM05D004192 ORTHO05D004917 5.9e-74 281.6 246 57.7
Lj5g0013826 Lotus japonicus HOM05D004192 ORTHO05D004917 1.7e-73 280.0 251 58.2
Medtr1g492590 Medicago truncatula HOM05D004192 ORTHO05D004917 1.7e-73 280.0 247 58.7
Phvul.007G105800 Phaseolus vulgaris HOM05D004192 ORTHO05D004917 2.3e-73 279.6 250 58.8
Ca_10484_v3 Cicer arietinum L. HOM05D004192 ORTHO05D004917 3.9e-73 278.9 247 60.3
Sc20g0001360 Simmondsia chinensis HOM05D004192 ORTHO05D004917 3.9e-73 278.9 245 59.2
Glyma.10G201300 Glycine max HOM05D004192 ORTHO05D004917 1.1e-72 277.3 253 58.9
VMungo0720G1942 Vigna mungo HOM05D004192 ORTHO05D004917 1.1e-72 277.3 251 58.2
Lsat_1_v5_gn_2_102840 Lactuca sativa HOM05D004192 ORTHO05D004917 2.5e-72 276.2 250 58.0
HanXRQChr14g0456301 Helianthus annuus HOM05D004192 ORTHO05D004917 9.5e-72 274.2 252 57.1
Glyma.20G189100 Glycine max HOM05D004192 ORTHO05D004917 1.2e-71 273.9 266 56.8
Lj2C27G6 Lonicera japonica HOM05D004192 ORTHO05D004917 1.2e-71 273.9 251 59.0
HanXRQChr14g0456291 Helianthus annuus HOM05D004192 ORTHO05D004917 1.6e-71 273.5 250 57.2
Psat6g175320 Pisum sativum HOM05D004192 ORTHO05D004917 2.1e-71 273.1 247 57.5
CDE06G2538 Ceratophyllum demersum HOM05D004192 ORTHO05D004917 1.4e-70 270.4 247 56.3
CiPaw.13G035500 Carya illinoinensis HOM05D004192 ORTHO05D004917 2.3e-70 269.6 245 59.2
SHI21315 Sapria himalayana HOM05D004192 ORTHO05D004917 4.0e-70 268.9 247 55.9
unitig_736.g22321 Utricularia gibba HOM05D004192 ORTHO05D004917 3.4e-69 265.8 247 55.5
Lalb_Chr21g0313171 Lupinus albus HOM05D004192 ORTHO05D004917 7.5e-69 264.6 247 56.3
THA.LOC104823194 Tarenaya hassleriana HOM05D004192 ORTHO05D004917 1.1e-67 260.8 247 55.9
THA.LOC104816452 Tarenaya hassleriana HOM05D004192 ORTHO05D004917 1.4e-67 260.4 254 57.1
ECA238G3394 Erigeron canadensis HOM05D004192 ORTHO05D004917 6.0e-66 255.0 252 52.8
HPP92_001744 Vanilla planifolia HOM05D004192 ORTHO05D004917 1.6e-63 246.9 249 51.8
AT3G10550 Arabidopsis thaliana HOM05D004192 ORTHO05D004917 2.1e-63 246.5 252 52.4
AL3G21970 Arabidopsis lyrata HOM05D004192 ORTHO05D004917 2.8e-63 246.1 252 53.2
TPR.G2517 Trifolium pratense HOM05D004192 ORTHO05D004917 3.6e-63 245.7 298 49.3
Thhalv10020062m.g Eutrema salsugineum HOM05D004192 ORTHO05D004917 3.1e-62 242.7 245 51.4
Thhalv10012689m.g Eutrema salsugineum HOM05D004192 ORTHO05D004917 6.8e-62 241.5 248 52.8
BcaB04g21235 Brassica carinata HOM05D004192 ORTHO05D004917 8.9e-62 241.1 253 50.2
AL6G14190 Arabidopsis lyrata HOM05D004192 ORTHO05D004917 9.8e-61 237.7 247 52.2
Carub.0003s0979 Capsella rubella HOM05D004192 ORTHO05D004917 1.3e-60 237.3 253 50.2
ATR0820G117 Amborella trichopoda HOM05D004192 ORTHO05D004917 2.9e-60 236.1 247 53.0
CARHR085070 Cardamine hirsuta HOM05D004192 ORTHO05D004917 2.9e-60 236.1 251 50.6
Sp3g08830 Schrenkiella parvula HOM05D004192 ORTHO05D004917 2.4e-59 233.0 248 50.4
AT5G04540 Arabidopsis thaliana HOM05D004192 ORTHO05D004917 2.7e-58 229.6 249 50.2
BcaNung05805 Brassica carinata HOM05D004192 ORTHO05D004917 7.8e-58 228.0 253 48.2
BolC1t05384H Brassica oleracea HOM05D004192 ORTHO05D004917 7.8e-58 228.0 253 48.2
C09p72230 Brassica napus HOM05D004192 ORTHO05D004917 3.9e-57 225.7 247 50.6
BolC9t59967H Brassica oleracea HOM05D004192 ORTHO05D004917 3.9e-57 225.7 247 50.6
A10p31560 Brassica napus HOM05D004192 ORTHO05D004917 3.3e-56 222.6 248 50.0
BraA10t45202Z Brassica rapa HOM05D004192 ORTHO05D004917 3.3e-56 222.6 248 50.0
Sp6g38220 Schrenkiella parvula HOM05D004192 ORTHO05D004917 5.6e-56 221.9 248 50.0
Aa31LG3G3400 Aethionema arabicum HOM05D004192 ORTHO05D004917 7.3e-56 221.5 249 46.6
CARHR208730 Cardamine hirsuta HOM05D004192 ORTHO05D004917 9.5e-56 221.1 251 49.0
BraA02t04817Z Brassica rapa HOM05D004192 ORTHO05D004917 1.4e-54 217.2 249 50.2
vmacro07216 Vaccinium macrocarpon HOM05D004192 ORTHO05D004917 1.8e-54 216.9 195 61.5
BolC2t06155H Brassica oleracea HOM05D004192 ORTHO05D004917 3.1e-54 216.1 249 49.4
C02p01980 Brassica napus HOM05D004192 ORTHO05D004917 8.9e-54 214.5 249 49.0
Carub.0006s0348 Capsella rubella HOM05D004192 ORTHO05D004917 8.9e-54 214.5 249 49.0
GSVIVG01034690001 Vitis vinifera HOM05D004192 ORTHO05D004917 9.9e-53 211.1 159 68.6
SEGI_16113 Sequoiadendron giganteum HOM05D004192 ORTHO05D004917 9.6e-48 194.5 247 41.7
CiPaw.14G028000 Carya illinoinensis HOM05D004192 ORTHO05D004917 1.4e-46 190.7 132 73.5
BraA01t04242Z Brassica rapa HOM05D004192 ORTHO05D004917 2.4e-46 189.9 222 47.3
Aa31LG11G5410 Aethionema arabicum HOM05D004192 ORTHO05D004917 4.4e-45 185.7 247 43.3
QL04p040652 Quercus lobata HOM05D004192 ORTHO05D004917 2.9e-44 183.0 246 48.8
BcaC06g32164 Brassica carinata HOM05D004192 ORTHO05D004917 1.2e-37 161.0 180 49.4
AagrBONN_evm.TU.Sc2ySwM_368.2559 Anthoceros agrestis HOM05D004192 ORTHO05D004917 7.9e-34 148.3 272 35.3
Pp3c18_20050 Physcomitrium patens HOM05D004192 ORTHO05D004917 1.1e-32 144.4 268 34.7
Mapoly0087s0031 Marchantia polymorpha HOM05D004192 ORTHO05D004917 3.3e-32 142.9 268 35.1
Pp3c22_15020 Physcomitrium patens HOM05D004192 ORTHO05D004917 3.3e-32 142.9 271 34.7
Actinidia18568 Actinidia chinensis HOM05D004192 ORTHO05D004917 3.9e-25 119.4 108 59.3
Oeu032726.1 Olea europaea HOM05D004192 ORTHO05D004917 8.7e-17 91.7 78 64.1
AL3G45840 Arabidopsis lyrata HOM05D004192 ORTHO05D004917 3.1e-14 83.2 46 71.7
SMO367G0225 Selaginella moellendorffii HOM05D004192 ORTHO05D004917 4.1e-14 82.8 232 28.9


User provided reference genes

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