Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu026504.1 Olea europaea HOM05D004898 ORTHO05D005574 1.7e-60 235.7 115 100.0
Oeu052872.1 Olea europaea HOM05D004898 ORTHO05D005574 6.0e-37 157.5 150 58.7
PGR042G1052 Punica granatum HOM05D004898 ORTHO05D005574 4.3e-35 151.4 119 66.4
Migut.M01405 Erythranthe guttata HOM05D004898 ORTHO05D005574 2.1e-34 149.1 150 54.7
Sabra06G0009800 Salix brachista HOM05D004898 ORTHO05D005574 2.1e-34 149.1 149 55.7
Actinidia34018 Actinidia chinensis HOM05D004898 ORTHO05D005574 4.8e-34 147.9 150 53.3
Actinidia39792 Actinidia chinensis HOM05D004898 ORTHO05D005574 4.8e-34 147.9 150 53.3
Potri.006G013900 Populus trichocarpa HOM05D004898 ORTHO05D005574 4.8e-34 147.9 149 55.7
MD05G1358600 Malus domestica HOM05D004898 ORTHO05D005574 6.2e-34 147.5 149 54.4
FvH4_3g00891 Fragaria vesca HOM05D004898 ORTHO05D005574 1.4e-33 146.4 149 55.0
FAN25G1838 Fragaria x ananassa HOM05D004898 ORTHO05D005574 1.4e-33 146.4 149 55.0
Rhsim13G0144800 Rhododendron simsii HOM05D004898 ORTHO05D005574 1.4e-33 146.4 149 53.0
Cc09_g00800 Coffea canephora HOM05D004898 ORTHO05D005574 1.8e-33 146.0 149 55.0
Eucgr.L01902 Eucalyptus grandis HOM05D004898 ORTHO05D005574 3.1e-33 145.2 149 55.0
GSVIVG01003326001 Vitis vinifera HOM05D004898 ORTHO05D005574 3.1e-33 145.2 149 54.4
GSVIVG01006080001 Vitis vinifera HOM05D004898 ORTHO05D005574 3.1e-33 145.2 149 54.4
Ciclev10014770m.g Citrus clementina HOM05D004898 ORTHO05D005574 4.0e-33 144.8 149 54.4
FAN21G2703 Fragaria x ananassa HOM05D004898 ORTHO05D005574 4.0e-33 144.8 149 54.4
Eucgr.E03924 Eucalyptus grandis HOM05D004898 ORTHO05D005574 5.3e-33 144.4 149 55.0
Prupe.4G009500 Prunus persica HOM05D004898 ORTHO05D005574 6.9e-33 144.1 149 53.7
RcHm_v2.0_Chr5g0001371 Rosa chinensis HOM05D004898 ORTHO05D005574 6.9e-33 144.1 150 54.0
BcaC03g16972 Brassica carinata HOM05D004898 ORTHO05D005574 1.5e-32 142.9 149 54.4
A02p31430 Brassica napus HOM05D004898 ORTHO05D005574 1.5e-32 142.9 149 54.4
C02p48760 Brassica napus HOM05D004898 ORTHO05D005574 1.5e-32 142.9 149 54.4
BolC2t10970H Brassica oleracea HOM05D004898 ORTHO05D005574 1.5e-32 142.9 149 54.4
BraA02t08145Z Brassica rapa HOM05D004898 ORTHO05D005574 1.5e-32 142.9 149 54.4
vmacro03635 Vaccinium macrocarpon HOM05D004898 ORTHO05D005574 2.0e-32 142.5 149 52.3
Atru.chr1.2413_Atru.chr1.2414 Acer truncatum HOM05D004898 ORTHO05D005574 2.6e-32 142.1 149 52.3
Manes.08G069675 Manihot esculenta HOM05D004898 ORTHO05D005574 4.5e-32 141.4 149 53.0
AUR62012806 Chenopodium quinoa HOM05D004898 ORTHO05D005574 5.8e-32 141.0 149 51.0
Nn1g03284 Nelumbo nucifera HOM05D004898 ORTHO05D005574 5.8e-32 141.0 149 52.3
ECA240G2526 Erigeron canadensis HOM05D004898 ORTHO05D005574 7.6e-32 140.6 149 52.3
SGA_v2.0_scaffold7G03752 Striga asiatica HOM05D004898 ORTHO05D005574 7.6e-32 140.6 150 52.0
TWI38G1092 Tripterygium wilfordii HOM05D004898 ORTHO05D005574 7.6e-32 140.6 149 52.3
Dinv07411 Davidia involucrata HOM05D004898 ORTHO05D005574 1.0e-31 140.2 149 52.3
EL10Ac8g20211 Beta vulgaris HOM05D004898 ORTHO05D005574 1.7e-31 139.4 149 51.0
CARHR173790 Cardamine hirsuta HOM05D004898 ORTHO05D005574 1.7e-31 139.4 149 52.3
BcaC04g21615 Brassica carinata HOM05D004898 ORTHO05D005574 2.2e-31 139.0 149 53.0
A09p23110 Brassica napus HOM05D004898 ORTHO05D005574 2.2e-31 139.0 149 53.0
C09p29850 Brassica napus HOM05D004898 ORTHO05D005574 2.2e-31 139.0 149 53.0
BolC9t55848H Brassica oleracea HOM05D004898 ORTHO05D005574 2.2e-31 139.0 149 53.0
BraA09t37914Z Brassica rapa HOM05D004898 ORTHO05D005574 2.2e-31 139.0 149 53.0
CANSAT56G0760 Cannabis sativa HOM05D004898 ORTHO05D005574 2.2e-31 139.0 149 50.3
Haze_06951 Corylus avellana HOM05D004898 ORTHO05D005574 2.2e-31 139.0 150 50.0
DCAR_030865 Daucus carota HOM05D004898 ORTHO05D005574 2.9e-31 138.7 150 49.3
Lsat_1_v5_gn_7_13740 Lactuca sativa HOM05D004898 ORTHO05D005574 2.9e-31 138.7 149 52.3
MBI19_g06154_MAGBIO Magnolia biondii HOM05D004898 ORTHO05D005574 3.8e-31 138.3 149 51.7
Sc05g0009650 Simmondsia chinensis HOM05D004898 ORTHO05D005574 3.8e-31 138.3 149 51.7
AL8G10410 Arabidopsis lyrata HOM05D004898 ORTHO05D005574 4.9e-31 137.9 149 52.3
CSS0031856 Camellia sinensis var. sinensis HOM05D004898 ORTHO05D005574 4.9e-31 137.9 150 52.0
CSS0045138 Camellia sinensis var. sinensis HOM05D004898 ORTHO05D005574 4.9e-31 137.9 150 52.0
Carub.0008s0022 Capsella rubella HOM05D004898 ORTHO05D005574 6.5e-31 137.5 149 52.3
Cfa000090 Carpinus fangiana HOM05D004898 ORTHO05D005574 6.5e-31 137.5 150 49.3
Hund23404 Selenicereus undatus HOM05D004898 ORTHO05D005574 6.5e-31 137.5 148 52.0
Thhalv10000848m.g Eutrema salsugineum HOM05D004898 ORTHO05D005574 8.4e-31 137.1 149 51.7
QL05p069311 Quercus lobata HOM05D004898 ORTHO05D005574 1.1e-30 136.7 150 49.3
ClCG01G010280 Citrullus lanatus HOM05D004898 ORTHO05D005574 1.4e-30 136.3 150 50.0
Sp2g12290 Schrenkiella parvula HOM05D004898 ORTHO05D005574 1.4e-30 136.3 149 51.7
AT5G47560 Arabidopsis thaliana HOM05D004898 ORTHO05D005574 1.9e-30 136.0 149 51.7
A06p44970 Brassica napus HOM05D004898 ORTHO05D005574 2.5e-30 135.6 149 51.7
BraA06t27368Z Brassica rapa HOM05D004898 ORTHO05D005574 2.5e-30 135.6 149 51.7
Sed0020280 Sechium edule HOM05D004898 ORTHO05D005574 4.2e-30 134.8 150 49.3
BcaC06g34240 Brassica carinata HOM05D004898 ORTHO05D005574 5.5e-30 134.4 149 51.0
C07p31210 Brassica napus HOM05D004898 ORTHO05D005574 5.5e-30 134.4 149 51.0
BolC7t43662H Brassica oleracea HOM05D004898 ORTHO05D005574 5.5e-30 134.4 149 51.0
Lalb_Chr18g0057021 Lupinus albus HOM05D004898 ORTHO05D005574 5.5e-30 134.4 150 48.0
THA.LOC104806731 Tarenaya hassleriana HOM05D004898 ORTHO05D005574 5.5e-30 134.4 149 52.3
Prupe.4G009400 Prunus persica HOM05D004898 ORTHO05D005574 7.1e-30 134.0 150 49.3
MELO3C025563.2 Cucumis melo HOM05D004898 ORTHO05D005574 1.2e-29 133.3 150 48.7
CsaV3_1G017190 Cucumis sativus L. HOM05D004898 ORTHO05D005574 1.2e-29 133.3 150 48.7
CiPaw.09G103400 Carya illinoinensis HOM05D004898 ORTHO05D005574 2.1e-29 132.5 150 48.7
Psat4g004680 Pisum sativum HOM05D004898 ORTHO05D005574 2.1e-29 132.5 150 47.3
FAN21G0575 Fragaria x ananassa HOM05D004898 ORTHO05D005574 3.5e-29 131.7 149 49.0
Gorai.011G009400 Gossypium raimondii HOM05D004898 ORTHO05D005574 3.5e-29 131.7 138 50.7
RcHm_v2.0_Chr5g0001361 Rosa chinensis HOM05D004898 ORTHO05D005574 3.5e-29 131.7 151 47.7
HPP92_022800 Vanilla planifolia HOM05D004898 ORTHO05D005574 3.5e-29 131.7 149 49.0
FvH4_3g00890 Fragaria vesca HOM05D004898 ORTHO05D005574 4.6e-29 131.3 149 48.3
arahy.Tifrunner.gnm1.ann1.GM6TB3 Arachis hypogaea HOM05D004898 ORTHO05D005574 2.3e-28 129.0 150 46.7
arahy.Tifrunner.gnm1.ann1.ZF0ICG Arachis hypogaea HOM05D004898 ORTHO05D005574 2.3e-28 129.0 150 46.7
unitig_748.g7600 Utricularia gibba HOM05D004898 ORTHO05D005574 2.3e-28 129.0 150 45.3
Glyma.09G010700 Glycine max HOM05D004898 ORTHO05D005574 3.0e-28 128.6 150 47.3
Glyma.15G115200 Glycine max HOM05D004898 ORTHO05D005574 3.9e-28 128.3 150 46.7
SEGI_04913 Sequoiadendron giganteum HOM05D004898 ORTHO05D005574 3.9e-28 128.3 148 46.6
arahy.Tifrunner.gnm1.ann1.5M9JPT Arachis hypogaea HOM05D004898 ORTHO05D005574 6.7e-28 127.5 150 46.7
arahy.Tifrunner.gnm1.ann1.L2E3EJ Arachis hypogaea HOM05D004898 ORTHO05D005574 6.7e-28 127.5 150 46.7
Phvul.006G142700 Phaseolus vulgaris HOM05D004898 ORTHO05D005574 6.7e-28 127.5 150 46.7
COL.COLO4_31899 Corchorus olitorius HOM05D004898 ORTHO05D005574 8.7e-28 127.1 150 47.3
MD10G1333000 Malus domestica HOM05D004898 ORTHO05D005574 4.3e-27 124.8 150 46.7
TPR.G30452 Trifolium pratense HOM05D004898 ORTHO05D005574 4.3e-27 124.8 150 44.7
VMungo0540G1349 Vigna mungo HOM05D004898 ORTHO05D005574 4.3e-27 124.8 150 46.0
Lj6g0016962 Lotus japonicus HOM05D004898 ORTHO05D005574 9.6e-27 123.6 150 44.0
Medtr2g026030 Medicago truncatula HOM05D004898 ORTHO05D005574 9.6e-27 123.6 150 44.7
MD10G1332900 Malus domestica HOM05D004898 ORTHO05D005574 1.6e-26 122.9 150 46.0
Psat1g175640 Pisum sativum HOM05D004898 ORTHO05D005574 2.1e-26 122.5 150 43.3
Nitab4.5_0000143g0160 Nicotiana tabacum HOM05D004898 ORTHO05D005574 6.3e-26 120.9 135 47.4
VMungo0540G0197 Vigna mungo HOM05D004898 ORTHO05D005574 2.4e-25 119.0 149 44.3
Glyma.07G265900 Glycine max HOM05D004898 ORTHO05D005574 3.1e-25 118.6 151 46.4
Os08g0503700 Oryza sativa ssp. japonica HOM05D004898 ORTHO05D005574 5.9e-24 114.4 149 42.3
Os09g0484900 Oryza sativa ssp. japonica HOM05D004898 ORTHO05D005574 7.6e-24 114.0 150 42.0
Zm00001eb158920 Zea mays HOM05D004898 ORTHO05D005574 6.5e-23 110.9 149 40.3
Zm00001eb316570 Zea mays HOM05D004898 ORTHO05D005574 4.2e-22 108.2 150 40.7
BcaC06g31369 Brassica carinata HOM05D004898 ORTHO05D005574 2.7e-21 105.5 129 46.5
Lj1A1241T64 Lonicera japonica HOM05D004898 ORTHO05D005574 3.3e-19 98.6 47 95.7
Peaxi162Scf00352g00047 Petunia axillaris HOM05D004898 ORTHO05D005574 4.3e-19 98.2 47 93.6
Solyc11g012360.2 Solanum lycopersicum HOM05D004898 ORTHO05D005574 7.4e-19 97.4 46 95.7
Sopen11g007110 Solanum pennellii HOM05D004898 ORTHO05D005574 7.4e-19 97.4 46 95.7
PGSC0003DMG400013282 Solanum tuberosum HOM05D004898 ORTHO05D005574 7.4e-19 97.4 46 95.7
CAN.G1186.45 Capsicum annuum HOM05D004898 ORTHO05D005574 9.7e-19 97.1 47 91.5
Duzib160G0749 Durio zibethinus HOM05D004898 ORTHO05D005574 8.2e-18 94.0 47 91.5
HanXRQChr05g0129101 Helianthus annuus HOM05D004898 ORTHO05D005574 1.1e-17 93.6 47 93.6
SMO118G0209 Selaginella moellendorffii HOM05D004898 ORTHO05D005574 1.8e-17 92.8 149 33.6
SMO270G0136 Selaginella moellendorffii HOM05D004898 ORTHO05D005574 2.4e-17 92.4 150 34.7
Thecc.06G234600 Theobroma cacao HOM05D004898 ORTHO05D005574 2.4e-17 92.4 47 89.4
AagrBONN_evm.TU.Sc2ySwM_117.1091 Anthoceros agrestis HOM05D004898 ORTHO05D005574 4.1e-17 91.7 148 34.5
PSO675G0622 Papaver somniferum HOM05D004898 ORTHO05D005574 5.3e-17 91.3 47 91.5
SalBow8G1501 Salvia bowleyana HOM05D004898 ORTHO05D005574 6.9e-17 90.9 47 89.4
Aqoxy4G02191 Aquilegia oxysepala HOM05D004898 ORTHO05D005574 9.0e-17 90.5 47 87.2
Cfa000089 Carpinus fangiana HOM05D004898 ORTHO05D005574 1.2e-16 90.1 47 85.1
Aa31LG9G5480 Aethionema arabicum HOM05D004898 ORTHO05D005574 2.0e-16 89.4 47 89.4
PSO541G1832 Papaver somniferum HOM05D004898 ORTHO05D005574 2.0e-16 89.4 47 89.4
Gorai.010G187200 Gossypium raimondii HOM05D004898 ORTHO05D005574 4.5e-16 88.2 47 83.0
Gohir.A06G153700 Gossypium hirsutum HOM05D004898 ORTHO05D005574 5.9e-16 87.8 47 80.9
Gohir.A10G008900 Gossypium hirsutum HOM05D004898 ORTHO05D005574 5.9e-16 87.8 47 83.0
Gohir.D06G160500 Gossypium hirsutum HOM05D004898 ORTHO05D005574 5.9e-16 87.8 47 80.9
Gohir.D10G008600 Gossypium hirsutum HOM05D004898 ORTHO05D005574 5.9e-16 87.8 47 83.0
TPR.G5945 Trifolium pratense HOM05D004898 ORTHO05D005574 1.0e-15 87.0 47 78.7
Medtr4g133230 Medicago truncatula HOM05D004898 ORTHO05D005574 1.3e-15 86.7 47 78.7
BcaC06g31373 Brassica carinata HOM05D004898 ORTHO05D005574 1.7e-15 86.3 47 87.2
Ca_21041_v3 Cicer arietinum L. HOM05D004898 ORTHO05D005574 1.7e-15 86.3 47 78.7
Lj4g0027564 Lotus japonicus HOM05D004898 ORTHO05D005574 1.4e-14 83.2 47 78.7
Ca_00729_v3 Cicer arietinum L. HOM05D004898 ORTHO05D005574 1.6e-13 79.7 155 32.3
Glyma.09G010800 Glycine max HOM05D004898 ORTHO05D005574 1.6e-13 79.7 46 73.9
Pp3c15_15560 Physcomitrium patens HOM05D004898 ORTHO05D005574 5.1e-12 74.7 150 30.0
TPR.G30453 Trifolium pratense HOM05D004898 ORTHO05D005574 2.0e-11 72.8 108 43.5
TPR.G14633 Trifolium pratense HOM05D004898 ORTHO05D005574 6.3e-10 67.8 45 64.4
Mapoly0082s0008 Marchantia polymorpha HOM05D004898 ORTHO05D005574 2.6e-08 62.4 47 53.2


User provided reference genes

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