Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu026485.2 Olea europaea HOM05D004206 ORTHO05D003325 6.4e-202 707.2 362 100.0
Oeu036176.1 Olea europaea HOM05D004206 ORTHO05D003325 6.4e-109 398.3 261 80.5
Cc06_g02970 Coffea canephora HOM05D004206 ORTHO05D003325 1.2e-59 234.6 297 47.5
SalBow3G3817 Salvia bowleyana HOM05D004206 ORTHO05D003325 1.5e-57 227.6 292 50.3
SGA_v2.0_scaffold126G33821 Striga asiatica HOM05D004206 ORTHO05D003325 1.1e-47 194.9 298 45.3
Oeu049209.1 Olea europaea HOM05D004206 ORTHO05D003325 2.4e-47 193.7 237 51.5
Dinv35636 Davidia involucrata HOM05D004206 ORTHO05D003325 3.4e-46 189.9 308 45.1
SalBow4G2008 Salvia bowleyana HOM05D004206 ORTHO05D003325 8.5e-45 185.3 421 35.4
SGA_v2.0_scaffold75G24932 Striga asiatica HOM05D004206 ORTHO05D003325 4.2e-44 183.0 384 39.1
Migut.J00362 Erythranthe guttata HOM05D004206 ORTHO05D003325 1.7e-40 171.0 297 44.1
MSTRG.5685 Avicennia marina HOM05D004206 ORTHO05D003325 7.0e-39 165.6 142 64.1
DCAR_009254 Daucus carota HOM05D004206 ORTHO05D003325 1.2e-38 164.9 301 39.9
Nitab4.5_0000349g0070 Nicotiana tabacum HOM05D004206 ORTHO05D003325 2.0e-38 164.1 302 39.4
PGSC0003DMG400008929 Solanum tuberosum HOM05D004206 ORTHO05D003325 3.5e-38 163.3 221 50.7
Nitab4.5_0000527g0130 Nicotiana tabacum HOM05D004206 ORTHO05D003325 7.7e-38 162.2 302 40.1
MSTRG.19101 Avicennia marina HOM05D004206 ORTHO05D003325 8.5e-37 158.7 203 47.3
Peaxi162Scf00039g01222 Petunia axillaris HOM05D004206 ORTHO05D003325 1.1e-36 158.3 299 40.8
Rhsim05G0188200 Rhododendron simsii HOM05D004206 ORTHO05D003325 2.5e-36 157.1 303 39.3
CSS0004803 Camellia sinensis var. sinensis HOM05D004206 ORTHO05D003325 8.0e-35 152.1 268 40.7
CAN.G97.20 Capsicum annuum HOM05D004206 ORTHO05D003325 8.0e-35 152.1 309 40.5
GSVIVG01025530001 Vitis vinifera HOM05D004206 ORTHO05D003325 1.8e-34 151.0 309 39.2
Lj3C971T5 Lonicera japonica HOM05D004206 ORTHO05D003325 5.2e-34 149.4 281 41.3
MSTRG.26756 Avicennia marina HOM05D004206 ORTHO05D003325 2.6e-33 147.1 132 60.6
Solyc09g010410.3 Solanum lycopersicum HOM05D004206 ORTHO05D003325 3.3e-33 146.7 224 47.8
Nitab4.5_0002077g0110 Nicotiana tabacum HOM05D004206 ORTHO05D003325 5.7e-33 146.0 311 39.9
Actinidia26442 Actinidia chinensis HOM05D004206 ORTHO05D003325 1.7e-32 144.4 305 37.7
Sopen09g005150 Solanum pennellii HOM05D004206 ORTHO05D003325 2.2e-32 144.1 241 44.4
Hma1.2p1_1707F.1_g298550 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 6.3e-32 142.5 287 40.4
PGSC0003DMG401019213 Solanum tuberosum HOM05D004206 ORTHO05D003325 8.2e-32 142.1 300 38.0
vmacro08670 Vaccinium macrocarpon HOM05D004206 ORTHO05D003325 1.8e-31 141.0 358 36.0
Hma1.2p1_1065F.1_g253750 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 1.3e-29 134.8 315 35.2
Hma1.2p1_0350F.1_g132380 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 6.5e-29 132.5 315 34.9
Actinidia13126 Actinidia chinensis HOM05D004206 ORTHO05D003325 2.5e-28 130.6 265 39.6
Peaxi162Scf00407g00067 Petunia axillaris HOM05D004206 ORTHO05D003325 5.5e-28 129.4 297 34.0
vmacro20128 Vaccinium macrocarpon HOM05D004206 ORTHO05D003325 3.6e-27 126.7 304 35.2
Sopen10g035740 Solanum pennellii HOM05D004206 ORTHO05D003325 4.7e-27 126.3 300 35.7
Haze_20742 Corylus avellana HOM05D004206 ORTHO05D003325 6.1e-27 125.9 374 32.1
ECA233G2126 Erigeron canadensis HOM05D004206 ORTHO05D003325 1.0e-26 125.2 266 38.7
Gohir.A09G158300 Gossypium hirsutum HOM05D004206 ORTHO05D003325 2.3e-26 124.0 169 45.0
Nitab4.5_0009149g0020 Nicotiana tabacum HOM05D004206 ORTHO05D003325 2.3e-26 124.0 313 36.7
QL07p047329 Quercus lobata HOM05D004206 ORTHO05D003325 4.0e-26 123.2 274 35.0
QL05p010542 Quercus lobata HOM05D004206 ORTHO05D003325 1.5e-25 121.3 274 35.0
Gorai.006G175200 Gossypium raimondii HOM05D004206 ORTHO05D003325 2.0e-25 120.9 169 44.4
MD12G1138400 Malus domestica HOM05D004206 ORTHO05D003325 4.4e-25 119.8 160 49.4
Duzib093G1984 Durio zibethinus HOM05D004206 ORTHO05D003325 5.7e-25 119.4 222 39.6
Gohir.A04G080300 Gossypium hirsutum HOM05D004206 ORTHO05D003325 7.5e-25 119.0 156 46.2
Gohir.D09G153700 Gossypium hirsutum HOM05D004206 ORTHO05D003325 7.5e-25 119.0 233 37.8
Medtr7g099950 Medicago truncatula HOM05D004206 ORTHO05D003325 9.8e-25 118.6 369 32.5
TAR633G1790 Trochodendron aralioides HOM05D004206 ORTHO05D003325 9.8e-25 118.6 269 36.1
Solyc10g086360.2 Solanum lycopersicum HOM05D004206 ORTHO05D003325 1.3e-24 118.2 236 40.3
Thecc.05G044400 Theobroma cacao HOM05D004206 ORTHO05D003325 2.8e-24 117.1 229 38.0
FAN09G1551 Fragaria x ananassa HOM05D004206 ORTHO05D003325 4.8e-24 116.3 153 48.4
FvH4_6g14310 Fragaria vesca HOM05D004206 ORTHO05D003325 1.1e-23 115.2 271 36.2
Lsat_1_v5_gn_1_55680 Lactuca sativa HOM05D004206 ORTHO05D003325 1.8e-23 114.4 150 50.7
CSS0042901 Camellia sinensis var. sinensis HOM05D004206 ORTHO05D003325 2.4e-23 114.0 289 34.3
Manes.08G076700 Manihot esculenta HOM05D004206 ORTHO05D003325 4.1e-23 113.2 139 51.8
FAN05G4716 Fragaria x ananassa HOM05D004206 ORTHO05D003325 1.2e-22 111.7 271 35.8
Atru.chr8.1956 Acer truncatum HOM05D004206 ORTHO05D003325 1.6e-22 111.3 252 34.9
FAN02G2861 Fragaria x ananassa HOM05D004206 ORTHO05D003325 2.0e-22 110.9 271 35.4
AUR62037393 Chenopodium quinoa HOM05D004206 ORTHO05D003325 3.5e-22 110.2 156 44.9
Phvul.001G170100 Phaseolus vulgaris HOM05D004206 ORTHO05D003325 3.5e-22 110.2 237 37.6
MD04G1121200 Malus domestica HOM05D004206 ORTHO05D003325 4.5e-22 109.8 240 37.9
Hund00876 Selenicereus undatus HOM05D004206 ORTHO05D003325 7.7e-22 109.0 383 30.5
RcHm_v2.0_Chr3g0467301 Rosa chinensis HOM05D004206 ORTHO05D003325 1.3e-21 108.2 232 39.2
Lalb_Chr25g0289551 Lupinus albus HOM05D004206 ORTHO05D003325 1.7e-21 107.8 258 35.3
Duzib106G1929 Durio zibethinus HOM05D004206 ORTHO05D003325 2.3e-21 107.5 144 45.8
Gohir.A11G326100 Gossypium hirsutum HOM05D004206 ORTHO05D003325 2.3e-21 107.5 146 44.5
HanXRQChr07g0196151 Helianthus annuus HOM05D004206 ORTHO05D003325 2.3e-21 107.5 198 40.9
Glyma.03G172400 Glycine max HOM05D004206 ORTHO05D003325 2.9e-21 107.1 153 44.4
Gorai.012G101500 Gossypium raimondii HOM05D004206 ORTHO05D003325 3.8e-21 106.7 155 42.6
Gohir.D04G119400 Gossypium hirsutum HOM05D004206 ORTHO05D003325 6.5e-21 105.9 155 42.6
Lalb_Chr02g0153081 Lupinus albus HOM05D004206 ORTHO05D003325 6.5e-21 105.9 147 48.3
EL10Ac9g20956 Beta vulgaris HOM05D004206 ORTHO05D003325 8.6e-21 105.5 157 42.7
Glyma.19G173300 Glycine max HOM05D004206 ORTHO05D003325 5.5e-20 102.8 153 42.5
Lalb_Chr20g0113171 Lupinus albus HOM05D004206 ORTHO05D003325 7.2e-20 102.4 217 35.9
Cfa017429 Carpinus fangiana HOM05D004206 ORTHO05D003325 9.5e-20 102.1 254 34.3
Aqoxy4G02996 Aquilegia oxysepala HOM05D004206 ORTHO05D003325 1.2e-19 101.7 160 43.8
arahy.Tifrunner.gnm1.ann1.72TEPU Arachis hypogaea HOM05D004206 ORTHO05D003325 1.2e-19 101.7 270 35.2
CANSAT35G0311 Cannabis sativa HOM05D004206 ORTHO05D003325 1.6e-19 101.3 165 44.2
Ca_08787_v3 Cicer arietinum L. HOM05D004206 ORTHO05D003325 1.6e-19 101.3 262 35.1
CiPaw.10G143300 Carya illinoinensis HOM05D004206 ORTHO05D003325 3.6e-19 100.1 271 32.8
HanXRQChr14g0453751 Helianthus annuus HOM05D004206 ORTHO05D003325 4.7e-19 99.8 274 34.7
TWI77G0356 Tripterygium wilfordii HOM05D004206 ORTHO05D003325 8.0e-19 99.0 154 42.9
Gohir.D11G345000 Gossypium hirsutum HOM05D004206 ORTHO05D003325 1.0e-18 98.6 158 40.5
Gorai.007G375400 Gossypium raimondii HOM05D004206 ORTHO05D003325 1.8e-18 97.8 158 40.5
Prupe.6G250300 Prunus persica HOM05D004206 ORTHO05D003325 1.8e-18 97.8 162 41.4
VMungo1383G1995 Vigna mungo HOM05D004206 ORTHO05D003325 2.3e-18 97.4 358 31.3
CiPaw.09G188800 Carya illinoinensis HOM05D004206 ORTHO05D003325 5.2e-18 96.3 265 31.7
PGR004G1990 Punica granatum HOM05D004206 ORTHO05D003325 5.2e-18 96.3 153 43.8
AUR62041741 Chenopodium quinoa HOM05D004206 ORTHO05D003325 6.8e-18 95.9 155 41.9
Ciclev10012502m.g Citrus clementina HOM05D004206 ORTHO05D003325 6.8e-18 95.9 148 43.9
Manes.09G086700 Manihot esculenta HOM05D004206 ORTHO05D003325 6.8e-18 95.9 139 46.0
Duzib128G2059 Durio zibethinus HOM05D004206 ORTHO05D003325 1.2e-17 95.1 228 35.1
PGR004G0289 Punica granatum HOM05D004206 ORTHO05D003325 2.0e-17 94.4 150 47.3
TWI74G0821 Tripterygium wilfordii HOM05D004206 ORTHO05D003325 2.0e-17 94.4 270 34.1
ClCG10G020930 Citrullus lanatus HOM05D004206 ORTHO05D003325 5.7e-17 92.8 257 33.1
Lalb_Chr21g0314341 Lupinus albus HOM05D004206 ORTHO05D003325 1.3e-16 91.7 156 41.7
Lalb_Chr06g0171041 Lupinus albus HOM05D004206 ORTHO05D003325 1.7e-16 91.3 146 44.5
MBI05_g10357_MAGBIO Magnolia biondii HOM05D004206 ORTHO05D003325 1.7e-16 91.3 379 29.6
Lsat_1_v5_gn_2_110540 Lactuca sativa HOM05D004206 ORTHO05D003325 2.8e-16 90.5 259 32.8
Lj2A99T58 Lonicera japonica HOM05D004206 ORTHO05D003325 2.8e-16 90.5 317 33.1
Potri.006G082100 Populus trichocarpa HOM05D004206 ORTHO05D003325 3.7e-16 90.1 144 41.7
Sc20g0004600 Simmondsia chinensis HOM05D004206 ORTHO05D003325 3.7e-16 90.1 98 50.0
Phvul.007G158100 Phaseolus vulgaris HOM05D004206 ORTHO05D003325 8.3e-16 89.0 156 38.5
Actinidia05297 Actinidia chinensis HOM05D004206 ORTHO05D003325 1.1e-15 88.6 197 36.0
Glyma.10G044400 Glycine max HOM05D004206 ORTHO05D003325 1.8e-15 87.8 162 39.5
TWI53G0070 Tripterygium wilfordii HOM05D004206 ORTHO05D003325 2.4e-15 87.4 143 40.6
VMungo0720G2610 Vigna mungo HOM05D004206 ORTHO05D003325 2.4e-15 87.4 157 38.2
Hma1.2p1_1535F.1_g289470 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 4.1e-15 86.7 133 39.8
Lj1g0028211 Lotus japonicus HOM05D004206 ORTHO05D003325 4.1e-15 86.7 187 38.0
unitig_578.g15702 Utricularia gibba HOM05D004206 ORTHO05D003325 7.0e-15 85.9 88 52.3
MELO3C009278.2 Cucumis melo HOM05D004206 ORTHO05D003325 1.2e-14 85.1 257 33.1
Aqoxy2G02033 Aquilegia oxysepala HOM05D004206 ORTHO05D003325 2.0e-14 84.3 154 39.6
ECA238G1623 Erigeron canadensis HOM05D000150 ORTHO05D000108 2.0e-14 84.3 294 31.3
TAR371G1160 Trochodendron aralioides HOM05D004206 ORTHO05D003325 3.5e-14 83.6 208 37.5
PSO206G0053 Papaver somniferum HOM05D004206 ORTHO05D003325 4.5e-14 83.2 326 30.4
Sabra06G0062000 Salix brachista HOM05D004206 ORTHO05D003325 5.9e-14 82.8 273 32.6
Ca_09615_v3 Cicer arietinum L. HOM05D004206 ORTHO05D003325 1.5e-12 78.2 136 44.1
PSO339G0439 Papaver somniferum HOM05D004206 ORTHO05D003325 1.9e-12 77.8 318 29.9
HanXRQChr14g0459281 Helianthus annuus HOM05D004206 ORTHO05D003325 4.3e-12 76.6 66 60.6
Hund07780 Selenicereus undatus HOM05D004206 ORTHO05D003325 7.3e-12 75.9 169 36.1
Cpa.g.sc11.170 Carica papaya HOM05D004206 ORTHO05D003325 1.6e-11 74.7 172 34.9
CsaV3_3G035080 Cucumis sativus L. HOM05D004206 ORTHO05D003325 1.6e-11 74.7 228 31.6
Sed0018769 Sechium edule HOM05D004206 ORTHO05D003325 1.6e-11 74.7 158 36.1
Sc01g0003990 Simmondsia chinensis HOM05D004206 ORTHO05D003325 3.6e-11 73.6 176 34.7
Eucgr.K03159 Eucalyptus grandis HOM05D004206 ORTHO05D003325 4.7e-11 73.2 258 30.2
Psat3g048840 Pisum sativum HOM05D004206 ORTHO05D003325 6.1e-11 72.8 59 59.3
COL.COLO4_14855 Corchorus olitorius HOM05D004206 ORTHO05D003325 1.8e-10 71.2 135 37.0
TPR.G21456 Trifolium pratense HOM05D004206 ORTHO05D003325 2.3e-10 70.9 199 36.2
ATR0559G289 Amborella trichopoda HOM05D004206 ORTHO05D003325 1.2e-09 68.6 182 34.1
Lsat_1_v5_gn_1_55700 Lactuca sativa HOM05D004206 ORTHO05D003325 1.2e-09 68.6 93 53.8
ECA248G2846 Erigeron canadensis HOM05D004206 ORTHO05D003325 2.6e-09 67.4 176 33.5
Actinidia07050 Actinidia chinensis HOM05D004206 ORTHO05D003325 5.8e-09 66.2 139 37.4
HanXRQChr11g0349321 Helianthus annuus HOM05D004206 ORTHO05D003325 1.3e-08 65.1 65 58.5
CSS0043919 Camellia sinensis var. sinensis HOM05D004206 ORTHO05D003325 1.7e-08 64.7 54 53.7
Os05g0113500 Oryza sativa ssp. japonica HOM05D004206 ORTHO05D003325 1.7e-08 64.7 215 30.2
SalBow8G2190 Salvia bowleyana HOM05D004206 ORTHO05D003325 2.2e-08 64.3 71 46.5
SEGI_05191 Sequoiadendron giganteum HOM05D004206 ORTHO05D003325 2.2e-08 64.3 143 37.1
PSO648G0001 Papaver somniferum HOM05D004206 ORTHO05D003325 2.9e-08 63.9 56 57.1
CSS0031426 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D000289 3.7e-08 63.5 114 41.2
Lj5g0023302 Lotus japonicus HOM05D004206 ORTHO05D003325 3.7e-08 63.5 172 35.5
TAR636G0761 Trochodendron aralioides HOM05D004206 ORTHO05D003325 3.7e-08 63.5 135 36.3
BraA04t18340Z Brassica rapa HOM05D008508 ORTHO05D003325 1.9e-07 61.2 122 35.2
Nn2g12918 Nelumbo nucifera HOM05D004206 ORTHO05D003325 1.9e-07 61.2 129 39.5
Psat6g067720 Pisum sativum HOM05D004206 ORTHO05D003325 2.4e-07 60.8 130 38.5
Rhsim13G0085900 Rhododendron simsii HOM05D004206 ORTHO05D003325 4.1e-07 60.1 86 41.9
vmacro03102 Vaccinium macrocarpon HOM05D004206 ORTHO05D003325 4.1e-07 60.1 113 41.6
PSO339G1969 Papaver somniferum HOM05D004206 ORTHO05D003325 7.0e-07 59.3 110 39.1
TPR.G25989 Trifolium pratense HOM05D004206 ORTHO05D003325 7.0e-07 59.3 46 63.0
Aa31LG10G9300 Aethionema arabicum HOM05D008508 ORTHO05D003325 9.2e-07 58.9 99 38.4
Aa31LG5G22930 Aethionema arabicum HOM05D008508 ORTHO05D003325 9.2e-07 58.9 108 38.9
Lsat_1_v5_gn_2_110560 Lactuca sativa HOM05D000437 ORTHO05D003325 9.2e-07 58.9 62 50.0
SEGI_11879 Sequoiadendron giganteum HOM05D004206 ORTHO05D003325 9.2e-07 58.9 110 40.0
CARHR132120 Cardamine hirsuta HOM05D008508 ORTHO05D003325 1.2e-06 58.5 97 49.5
MSTRG.7417 Avicennia marina HOM05D004206 ORTHO05D003325 1.6e-06 58.2 105 42.9
BcaC01g05613 Brassica carinata HOM05D008508 ORTHO05D003325 1.6e-06 58.2 153 32.7
C03p24300 Brassica napus HOM05D008508 ORTHO05D003325 1.6e-06 58.2 153 32.7
BolC3t14826H Brassica oleracea HOM05D008508 ORTHO05D003325 1.6e-06 58.2 153 32.7
DCAR_007387 Daucus carota HOM05D004206 ORTHO05D003325 1.6e-06 58.2 131 36.6
Medtr1g068825 Medicago truncatula HOM05D004206 ORTHO05D003325 1.6e-06 58.2 153 35.3
Zm00001eb266560 Zea mays HOM05D019293 ORTHO05D003325 1.6e-06 58.2 164 32.3
Carub.0005s2025 Capsella rubella HOM05D008508 ORTHO05D003325 2.0e-06 57.8 70 47.1
BcaC08g44645 Brassica carinata HOM05D008508 ORTHO05D003325 2.7e-06 57.4 86 38.4
C06p21610 Brassica napus HOM05D008508 ORTHO05D003325 2.7e-06 57.4 86 38.4
BolC6t37349H Brassica oleracea HOM05D008508 ORTHO05D003325 2.7e-06 57.4 86 39.5
CDE02G3836 Ceratophyllum demersum HOM05D004206 ORTHO05D003325 3.5e-06 57.0 86 48.8
BcaB01g03773 Brassica carinata HOM05D008508 ORTHO05D003325 4.6e-06 56.6 155 34.2
Thhalv10017918m.g Eutrema salsugineum HOM05D008508 ORTHO05D003325 4.6e-06 56.6 64 45.3
BolC4t22647H Brassica oleracea HOM05D008508 ORTHO05D003325 6.0e-06 56.2 60 48.3
Migut.M01027 Erythranthe guttata HOM05D004206 ORTHO05D003325 6.0e-06 56.2 80 42.5
BcaC02g11856 Brassica carinata HOM05D008508 ORTHO05D003325 7.8e-06 55.8 54 51.9
A04p28630 Brassica napus HOM05D008508 ORTHO05D003325 7.8e-06 55.8 122 36.9
A07p21780 Brassica napus HOM05D008508 ORTHO05D003325 7.8e-06 55.8 55 52.7
C04p10560 Brassica napus HOM05D008508 ORTHO05D003325 7.8e-06 55.8 54 51.9


User provided reference genes

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