Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu026461.3 Olea europaea HOM05D003759 ORTHO05D004149 1.1e-173 613.2 310 100.0
Oeu021304.1 Olea europaea HOM05D003759 ORTHO05D004149 2.0e-79 300.1 333 54.7
MSTRG.6151 Avicennia marina HOM05D003759 ORTHO05D004149 7.5e-58 228.4 328 46.3
SalBow1G3284 Salvia bowleyana HOM05D003759 ORTHO05D004149 2.8e-57 226.5 328 44.5
SGA_v2.0_scaffold265G46100 Striga asiatica HOM05D003759 ORTHO05D004149 7.3e-53 211.8 333 40.8
SGA_v2.0_scaffold45G17024 Striga asiatica HOM05D003759 ORTHO05D004149 1.2e-52 211.1 317 42.9
Nitab4.5_0002891g0100 Nicotiana tabacum HOM05D003759 ORTHO05D004149 6.8e-51 205.3 326 42.6
Nitab4.5_0008875g0010 Nicotiana tabacum HOM05D003759 ORTHO05D004149 2.0e-50 203.8 323 41.8
Migut.J01364 Erythranthe guttata HOM05D003759 ORTHO05D004149 4.9e-49 199.1 321 44.2
Solyc12g009970.2 Solanum lycopersicum HOM05D003759 ORTHO05D004149 1.9e-45 187.2 326 39.0
Sopen12g004840 Solanum pennellii HOM05D003759 ORTHO05D004149 5.6e-45 185.7 326 38.7
SalBow1G6739 Salvia bowleyana HOM05D003759 ORTHO05D004149 7.3e-45 185.3 328 41.2
PGSC0003DMG400007832 Solanum tuberosum HOM05D003759 ORTHO05D004149 2.0e-42 177.2 325 37.5
PGSC0003DMG400011142 Solanum tuberosum HOM05D003759 ORTHO05D004149 1.3e-41 174.5 339 36.6
Peaxi162Scf00062g00131 Petunia axillaris HOM05D003759 ORTHO05D004149 2.9e-41 173.3 308 38.6
Nitab4.5_0001571g0070 Nicotiana tabacum HOM05D003759 ORTHO05D004149 3.7e-41 172.9 336 37.2
Migut.K00316 Erythranthe guttata HOM05D003759 ORTHO05D004149 5.0e-38 162.5 321 38.0
Nitab4.5_0005869g0060 Nicotiana tabacum HOM05D003759 ORTHO05D004149 6.6e-38 162.2 337 37.4
Peaxi162Scf00401g00425 Petunia axillaris HOM05D003759 ORTHO05D004149 1.1e-37 161.4 268 38.8
Oeu028997.1 Olea europaea HOM05D003759 ORTHO05D004149 3.6e-36 156.4 243 42.0
CAN.G160.50 Capsicum annuum HOM05D003759 ORTHO05D004149 8.1e-36 155.2 320 35.3
CAN.G551.47 Capsicum annuum HOM05D003759 ORTHO05D004149 1.4e-35 154.5 312 35.6
Sopen07g001800 Solanum pennellii HOM05D003759 ORTHO05D004149 1.5e-34 151.0 339 33.6
Cc06_g14820 Coffea canephora HOM05D003759 ORTHO05D004149 5.8e-34 149.1 337 36.2
Solyc07g005690.3 Solanum lycopersicum HOM05D003759 ORTHO05D004149 3.7e-33 146.4 339 33.3
Lj4g0026574 Lotus japonicus HOM05D003759 ORTHO05D004149 6.4e-33 145.6 315 36.5
Medtr4g130700 Medicago truncatula HOM05D003759 ORTHO05D004149 1.9e-32 144.1 314 35.4
Psat4g009880 Pisum sativum HOM05D003759 ORTHO05D004149 5.4e-32 142.5 315 34.0
Rhsim03G0257600 Rhododendron simsii HOM05D003759 ORTHO05D004149 3.9e-30 136.3 336 33.0
TPR.G24855 Trifolium pratense HOM05D003759 ORTHO05D004149 5.1e-30 136.0 313 34.5
HanXRQChr12g0357671 Helianthus annuus HOM05D003759 ORTHO05D004149 6.6e-30 135.6 319 37.0
vmacro06067 Vaccinium macrocarpon HOM05D003759 ORTHO05D004149 6.6e-30 135.6 335 32.8
ECA234G4063 Erigeron canadensis HOM05D003759 ORTHO05D004149 1.9e-29 134.0 316 35.4
ClCG06G012480 Citrullus lanatus HOM05D003759 ORTHO05D004149 9.5e-29 131.7 313 32.3
Lalb_Chr08g0234281 Lupinus albus HOM05D003759 ORTHO05D004149 9.5e-29 131.7 289 34.3
CsaV3_1G029030 Cucumis sativus L. HOM05D003759 ORTHO05D004149 4.7e-28 129.4 310 32.3
CANSAT11G0712 Cannabis sativa HOM05D003759 ORTHO05D004149 1.1e-27 128.3 317 33.1
Actinidia38317 Actinidia chinensis HOM05D003759 ORTHO05D004149 1.4e-27 127.9 332 33.1
Cpa.g.sc46.168 Carica papaya HOM05D003759 ORTHO05D004149 1.4e-27 127.9 317 33.4
MELO3C010213.2 Cucumis melo HOM05D003759 ORTHO05D004149 1.4e-27 127.9 312 34.3
Glyma.02G204900 Glycine max HOM05D003759 ORTHO05D004149 2.4e-27 127.1 318 34.6
PGR102G0437 Punica granatum HOM05D003759 ORTHO05D004149 8.9e-27 125.2 312 33.3
Dinv43255 Davidia involucrata HOM05D003759 ORTHO05D004149 1.2e-26 124.8 315 34.0
VMungo1215G0492 Vigna mungo HOM05D003759 ORTHO05D004149 1.5e-26 124.4 316 32.6
Glyma.17G073100 Glycine max HOM05D003759 ORTHO05D004149 7.6e-26 122.1 325 33.5
Phvul.003G155300 Phaseolus vulgaris HOM05D003759 ORTHO05D004149 1.7e-25 120.9 316 33.5
Gohir.D08G273700 Gossypium hirsutum HOM05D003759 ORTHO05D004149 2.2e-25 120.6 311 31.5
VMungo1309G0866 Vigna mungo HOM05D003759 ORTHO05D004149 1.4e-24 117.9 313 31.6
Phvul.009G204700 Phaseolus vulgaris HOM05D003759 ORTHO05D004149 1.9e-24 117.5 311 32.8
Gorai.004G292200 Gossypium raimondii HOM05D003759 ORTHO05D004149 7.1e-24 115.5 311 31.2
Manes.06G035500 Manihot esculenta HOM05D003759 ORTHO05D004149 7.1e-24 115.5 316 29.7
CSS0036931 Camellia sinensis var. sinensis HOM05D003759 ORTHO05D004149 9.2e-24 115.2 326 30.7
Actinidia38668 Actinidia chinensis HOM05D003759 ORTHO05D004149 1.2e-23 114.8 328 29.9
HanXRQChr10g0313651 Helianthus annuus HOM05D003759 ORTHO05D004149 1.2e-23 114.8 314 32.8
ClCG02G014430 Citrullus lanatus HOM05D003759 ORTHO05D004149 2.1e-23 114.0 316 30.7
Actinidia24379 Actinidia chinensis HOM05D003759 ORTHO05D004149 1.3e-22 111.3 324 31.8
Lalb_Chr13g0300821 Lupinus albus HOM05D003759 ORTHO05D004149 1.3e-22 111.3 311 31.8
COL.COLO4_18822 Corchorus olitorius HOM05D003759 ORTHO05D004149 1.7e-22 110.9 312 29.8
Hma1.2p1_0222F.1_g093653 Hydrangea macrophylla HOM05D003759 ORTHO05D004149 1.7e-22 110.9 369 29.0
Hma1.2p1_2680F.1_g326810 Hydrangea macrophylla HOM05D003759 ORTHO05D004149 1.7e-22 110.9 369 29.0
Haze_19170 Corylus avellana HOM05D003759 ORTHO05D004149 2.3e-22 110.5 308 31.8
Eucgr.C00252 Eucalyptus grandis HOM05D003759 ORTHO05D004149 2.3e-22 110.5 319 30.1
Ca_21134_v3 Cicer arietinum L. HOM05D003759 ORTHO05D004149 3.0e-22 110.2 312 31.7
Cfa020811 Carpinus fangiana HOM05D003759 ORTHO05D004149 3.9e-22 109.8 308 31.2
CiPaw.15G166900 Carya illinoinensis HOM05D003759 ORTHO05D004149 5.1e-22 109.4 309 31.4
QL02p093514 Quercus lobata HOM05D003759 ORTHO05D004149 6.6e-22 109.0 309 30.4
Ca_21136_v3 Cicer arietinum L. HOM05D003759 ORTHO05D004149 1.5e-21 107.8 295 31.5
arahy.Tifrunner.gnm1.ann1.WN4J7U Arachis hypogaea HOM05D003759 ORTHO05D004149 1.9e-21 107.5 336 30.7
arahy.Tifrunner.gnm1.ann1.5MW7KS Arachis hypogaea HOM05D003759 ORTHO05D004149 2.5e-21 107.1 336 30.7
vmacro16796 Vaccinium macrocarpon HOM05D003759 ORTHO05D004149 3.3e-21 106.7 327 29.1
Duzib150G1598 Durio zibethinus HOM05D003759 ORTHO05D004149 4.3e-21 106.3 316 30.1
MELO3C004129.2 Cucumis melo HOM05D003759 ORTHO05D004149 5.6e-21 105.9 312 30.4
HanXRQChr09g0244591 Helianthus annuus HOM05D003759 ORTHO05D004149 1.6e-20 104.4 294 32.0
unitig_748.g7198 Utricularia gibba HOM05D003759 ORTHO05D004149 2.1e-20 104.0 313 31.9
DCAR_014806 Daucus carota HOM05D003759 ORTHO05D004149 2.8e-20 103.6 307 29.3
GSVIVG01023625001 Vitis vinifera HOM05D003759 ORTHO05D004149 4.7e-20 102.8 311 29.3
MD15G1151500 Malus domestica HOM05D003759 ORTHO05D004149 6.2e-20 102.4 308 29.9
Prupe.7G264400 Prunus persica HOM05D003759 ORTHO05D004149 6.2e-20 102.4 309 28.8
Ciclev10009224m.g Citrus clementina HOM05D003759 ORTHO05D004149 1.4e-19 101.3 312 30.4
HanXRQChr03g0065561 Helianthus annuus HOM05D003759 ORTHO05D004149 1.8e-19 100.9 312 31.1
Lalb_Chr12g0198751 Lupinus albus HOM05D003759 ORTHO05D004149 2.4e-19 100.5 307 28.7
Rhsim01G0028200 Rhododendron simsii HOM05D003759 ORTHO05D004149 1.2e-18 98.2 326 29.1
Lj6g0003054 Lotus japonicus HOM05D003759 ORTHO05D004149 3.4e-18 96.7 312 32.4
unitig_0.g2686 Utricularia gibba HOM05D003759 ORTHO05D004149 4.4e-18 96.3 319 28.5
Sp7g28510 Schrenkiella parvula HOM05D003759 ORTHO05D004149 1.3e-17 94.7 290 29.3
TAR383G0583 Trochodendron aralioides HOM05D003759 ORTHO05D004149 1.7e-17 94.4 316 30.4
CiPaw.16G108400 Carya illinoinensis HOM05D003759 ORTHO05D004149 2.2e-17 94.0 310 28.4
Gohir.D07G031400 Gossypium hirsutum HOM05D003759 ORTHO05D004149 2.2e-17 94.0 308 27.3
Gorai.001G032800 Gossypium raimondii HOM05D003759 ORTHO05D004149 2.2e-17 94.0 308 27.3
FAN28G1366 Fragaria x ananassa HOM05D003759 ORTHO05D004149 2.9e-17 93.6 308 27.9
THA.LOC104819991 Tarenaya hassleriana HOM05D003759 ORTHO05D004149 2.9e-17 93.6 294 28.9
Gohir.A07G027400 Gossypium hirsutum HOM05D003759 ORTHO05D004149 4.9e-17 92.8 308 27.6
Thecc.09G028600 Theobroma cacao HOM05D003759 ORTHO05D004149 8.4e-17 92.0 313 26.2
Lsat_1_v5_gn_7_50020 Lactuca sativa HOM05D003759 ORTHO05D004149 1.1e-16 91.7 329 28.3
FAN23G1979 Fragaria x ananassa HOM05D003759 ORTHO05D004149 1.4e-16 91.3 308 26.9
CsaV3_2G007570 Cucumis sativus L. HOM05D003759 ORTHO05D004149 1.9e-16 90.9 242 30.6
TAR625G0365 Trochodendron aralioides HOM05D003759 ORTHO05D004149 4.2e-16 89.7 313 29.1
Gohir.A05G052900 Gossypium hirsutum HOM05D003759 ORTHO05D004149 5.4e-16 89.4 313 27.8
RcHm_v2.0_Chr2g0085521 Rosa chinensis HOM05D003759 ORTHO05D004149 5.4e-16 89.4 308 27.3
Atru.chr7.24 Acer truncatum HOM05D003759 ORTHO05D004149 7.1e-16 89.0 322 28.0
FvH4_1g00810 Fragaria vesca HOM05D003759 ORTHO05D004149 1.2e-15 88.2 309 27.8
Hma1.2p1_0222F.1_g093656 Hydrangea macrophylla HOM05D003759 ORTHO05D004149 1.2e-15 88.2 114 48.2
Hma1.2p1_2680F.1_g326800 Hydrangea macrophylla HOM05D003759 ORTHO05D004149 1.2e-15 88.2 114 48.2
Lsat_1_v5_gn_5_90100 Lactuca sativa HOM05D003759 ORTHO05D004149 1.6e-15 87.8 243 30.9
Dinv42845 Davidia involucrata HOM05D003759 ORTHO05D004149 7.8e-15 85.5 149 40.9
MD02G1006500 Malus domestica HOM05D003759 ORTHO05D004149 7.8e-15 85.5 308 27.3
CsaV3_1G029050 Cucumis sativus L. HOM05D003759 ORTHO05D004149 1.0e-14 85.1 68 55.9
Sabra06G0139200 Salix brachista HOM05D003759 ORTHO05D004149 2.3e-14 84.0 306 28.1
Gorai.009G056200 Gossypium raimondii HOM05D003759 ORTHO05D004149 3.9e-14 83.2 311 25.4
TWI34G0689 Tripterygium wilfordii HOM05D003759 ORTHO05D004149 6.6e-14 82.4 312 28.8
Gohir.A08G252100 Gossypium hirsutum HOM05D003759 ORTHO05D004149 8.7e-14 82.0 308 26.9
MBI15_g18234_MAGBIO Magnolia biondii HOM05D003759 ORTHO05D004149 1.5e-13 81.3 316 26.6
C01p08320 Brassica napus HOM05D003759 ORTHO05D004149 3.3e-13 80.1 291 27.5
THA.LOC104803918 Tarenaya hassleriana HOM05D003759 ORTHO05D004149 3.3e-13 80.1 294 28.2
Dinv41366 Davidia involucrata HOM05D003759 ORTHO05D004149 4.3e-13 79.7 106 46.2
Duzib168G1894 Durio zibethinus HOM05D003759 ORTHO05D004149 7.3e-13 79.0 239 27.2
Gohir.D05G054500 Gossypium hirsutum HOM05D003759 ORTHO05D004149 7.3e-13 79.0 311 24.8
BolC1t00818H Brassica oleracea HOM05D003759 ORTHO05D004149 1.3e-12 78.2 291 28.9
Actinidia01426 Actinidia chinensis HOM05D003759 ORTHO05D004149 1.6e-12 77.8 99 51.5
A01p07630 Brassica napus HOM05D003759 ORTHO05D004149 2.1e-12 77.4 289 26.0
BraA01t00706Z Brassica rapa HOM05D003759 ORTHO05D004149 2.8e-12 77.0 289 26.0
HanXRQChr16g0511321 Helianthus annuus HOM05D003759 ORTHO05D004149 2.8e-12 77.0 86 54.7
BcaC09g51852 Brassica carinata HOM05D003759 ORTHO05D004149 3.6e-12 76.6 291 27.1
ECA240G4545 Erigeron canadensis HOM05D003759 ORTHO05D004149 3.6e-12 76.6 318 28.9
Sed0021485 Sechium edule HOM05D003759 ORTHO05D004149 3.6e-12 76.6 245 28.6
TWI32G1309 Tripterygium wilfordii HOM05D003759 ORTHO05D004149 6.2e-12 75.9 312 26.3
Sabra18G0089900 Salix brachista HOM05D003759 ORTHO05D004149 8.1e-12 75.5 308 26.0
BcaNung02973 Brassica carinata HOM05D003759 ORTHO05D004149 1.1e-11 75.1 290 25.5
Thhalv10026294m.g Eutrema salsugineum HOM05D003759 ORTHO05D004149 1.8e-11 74.3 244 30.3
A03p12490 Brassica napus HOM05D003759 ORTHO05D004149 9.0e-11 72.0 289 24.2
BolC3t13911H Brassica oleracea HOM05D003759 ORTHO05D004149 9.0e-11 72.0 289 24.6
HanXRQChr09g0244571 Helianthus annuus HOM05D003759 ORTHO05D004149 2.0e-10 70.9 295 27.5
TWI63G0632 Tripterygium wilfordii HOM05D003759 ORTHO05D004149 2.0e-10 70.9 312 23.1
Carub.0007s0993 Capsella rubella HOM05D003759 ORTHO05D004149 2.6e-10 70.5 242 28.1
C03p14700 Brassica napus HOM05D003759 ORTHO05D004149 4.5e-10 69.7 289 24.2
BcaB05g22385 Brassica carinata HOM05D003759 ORTHO05D004149 5.8e-10 69.3 290 26.2
Thhalv10014665m.g Eutrema salsugineum HOM05D003759 ORTHO05D004149 7.6e-10 68.9 295 24.4
Potri.018G105300 Populus trichocarpa HOM05D003759 ORTHO05D004149 9.9e-10 68.6 136 39.0
AL7G21510 Arabidopsis lyrata HOM05D003759 ORTHO05D004149 1.3e-09 68.2 246 28.0
Sed0022175 Sechium edule HOM05D003759 ORTHO05D004149 1.7e-09 67.8 175 33.7
BcaNung04561 Brassica carinata HOM05D003759 ORTHO05D004149 2.2e-09 67.4 297 27.3
Dinv41365 Davidia involucrata HOM05D003759 ORTHO05D004149 2.2e-09 67.4 70 52.9
Sed0003883 Sechium edule HOM05D003759 ORTHO05D004149 2.9e-09 67.0 175 32.0
DCAR_021655 Daucus carota HOM05D002201 ORTHO05D007560 3.8e-09 66.6 120 34.2
A10p15270 Brassica napus HOM05D003759 ORTHO05D004149 6.4e-09 65.9 286 24.5
C09p49780 Brassica napus HOM05D003759 ORTHO05D004149 8.4e-09 65.5 290 25.2
Duzib168G0610 Durio zibethinus HOM05D008192 ORTHO05D010301 8.4e-09 65.5 90 45.6
AT4G30630 Arabidopsis thaliana HOM05D003759 ORTHO05D004149 1.1e-08 65.1 247 25.9
C07p58060 Brassica napus HOM05D000058 ORTHO05D000077 1.1e-08 65.1 288 25.3
BolC7t46265H Brassica oleracea HOM05D003759 ORTHO05D004149 1.1e-08 65.1 288 25.3
BraA10t43608Z Brassica rapa HOM05D003759 ORTHO05D004149 1.4e-08 64.7 286 24.1
BolC9t57829H Brassica oleracea HOM05D003759 ORTHO05D004149 1.9e-08 64.3 292 25.7
HPP92_018342 Vanilla planifolia HOM05D003759 ORTHO05D004149 1.9e-08 64.3 87 40.2
PSO339G1361 Papaver somniferum HOM05D003759 ORTHO05D004149 2.4e-08 63.9 319 25.4
Potri.006G183000 Populus trichocarpa HOM05D003759 ORTHO05D004149 2.4e-08 63.9 237 25.7
BcaNung00572 Brassica carinata HOM05D003759 ORTHO05D004149 5.4e-08 62.8 288 25.0
AT5G57910 Arabidopsis thaliana HOM05D003759 ORTHO05D004149 9.3e-08 62.0 292 24.7
Aqoxy7G03381 Aquilegia oxysepala HOM05D003759 ORTHO05D004149 1.2e-07 61.6 320 25.0
HPP92_010344 Vanilla planifolia HOM05D045913 ORTHO05D004149 1.2e-07 61.6 312 26.6
Nn8g39944 Nelumbo nucifera HOM05D003759 ORTHO05D004149 1.6e-07 61.2 61 52.5
A03p60150 Brassica napus HOM05D003759 ORTHO05D004149 2.1e-07 60.8 290 25.9
BraA03t10564Z Brassica rapa HOM05D003759 ORTHO05D004149 2.1e-07 60.8 289 22.8
BraA03t15060Z Brassica rapa HOM05D003759 ORTHO05D004149 2.1e-07 60.8 290 25.9
Dinv13414 Davidia involucrata HOM05D008192 ORTHO05D010301 2.1e-07 60.8 105 41.9
A02p08110 Brassica napus HOM05D003759 ORTHO05D004149 3.5e-07 60.1 288 24.0
BraA02t05884Z Brassica rapa HOM05D003759 ORTHO05D004149 3.5e-07 60.1 288 24.0
Thecc.09G015000 Theobroma cacao HOM05D008192 ORTHO05D010301 3.5e-07 60.1 103 43.7
BcaB05g22386 Brassica carinata HOM05D003759 ORTHO05D004149 4.6e-07 59.7 286 25.5
C02p13760 Brassica napus HOM05D003759 ORTHO05D004149 4.6e-07 59.7 286 25.5
BolC2t07494H Brassica oleracea HOM05D003759 ORTHO05D004149 4.6e-07 59.7 286 25.5
Dinv08187 Davidia involucrata HOM05D008192 ORTHO05D010301 6.0e-07 59.3 105 41.0
Duzib187G1399 Durio zibethinus HOM05D008192 ORTHO05D010301 7.9e-07 58.9 175 32.0
CARHR271690 Cardamine hirsuta HOM05D003759 ORTHO05D004149 1.0e-06 58.5 297 23.9
MD15G1041800 Malus domestica HOM05D008192 ORTHO05D010301 1.0e-06 58.5 141 33.3
Gohir.D06G104100 Gossypium hirsutum HOM05D008192 ORTHO05D010301 1.8e-06 57.8 125 35.2
AL8G33980 Arabidopsis lyrata HOM05D003759 ORTHO05D004149 2.3e-06 57.4 98 39.8
CARHR238510 Cardamine hirsuta HOM05D003759 ORTHO05D004149 2.3e-06 57.4 242 26.9
Haze_21404 Corylus avellana HOM05D008192 ORTHO05D010301 3.0e-06 57.0 106 39.6
Gohir.D05G062401 Gossypium hirsutum HOM05D008192 ORTHO05D010301 3.0e-06 57.0 88 43.2
Prupe.1G394700 Prunus persica HOM05D008192 ORTHO05D010301 3.0e-06 57.0 122 34.4
Aa31LG3G13740 Aethionema arabicum HOM05D003759 ORTHO05D004149 8.7e-06 55.5 91 34.1
BcaB01g04466 Brassica carinata HOM05D003759 ORTHO05D004149 8.7e-06 55.5 95 35.8
Sp6g19580 Schrenkiella parvula HOM05D003759 ORTHO05D004149 8.7e-06 55.5 97 38.1


User provided reference genes

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