Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu026427.1 Olea europaea HOM05D011460 ORTHO05D010383 9.3e-139 496.9 256 100.0
MSTRG.27468 Avicennia marina HOM05D011460 ORTHO05D010383 2.3e-44 183.3 254 48.8
Migut.F01990 Erythranthe guttata HOM05D011460 ORTHO05D010383 3.3e-43 179.5 249 49.0
MSTRG.9176 Avicennia marina HOM05D011460 ORTHO05D010383 1.6e-42 177.2 175 60.6
Dinv11796 Davidia involucrata HOM05D000336 ORTHO05D002705 3.1e-41 172.9 243 47.3
Hma1.2p1_2080F.1_g313480 Hydrangea macrophylla HOM05D011460 ORTHO05D010383 6.9e-33 145.2 230 41.7
Nitab4.5_0005460g0040 Nicotiana tabacum HOM05D011460 ORTHO05D010383 6.2e-26 122.1 240 38.3
Peaxi162Scf00254g00044 Petunia axillaris HOM05D011460 ORTHO05D010383 8.2e-26 121.7 228 39.9
Nitab4.5_0021955g0010 Nicotiana tabacum HOM05D011460 ORTHO05D010383 1.8e-25 120.6 253 39.5
Actinidia03033 Actinidia chinensis HOM05D011460 ORTHO05D010383 5.5e-22 109.0 218 39.0
Rhsim09G0153300 Rhododendron simsii HOM05D005690 ORTHO05D007075 9.3e-22 108.2 245 37.6
Lsat_1_v5_gn_2_113841 Lactuca sativa HOM05D011460 ORTHO05D010383 2.5e-19 100.1 229 38.9
Peaxi162Scf00890g00013 Petunia axillaris HOM05D011460 ORTHO05D010383 3.3e-19 99.8 209 39.2
DCAR_006457 Daucus carota HOM05D011460 ORTHO05D010383 6.9e-17 92.0 220 34.5
Solyc11g008750.1 Solanum lycopersicum HOM05D011460 ORTHO05D010383 2.6e-16 90.1 203 37.9
Actinidia28951 Actinidia chinensis HOM05D011460 ORTHO05D010383 5.9e-16 89.0 191 39.3
TAR383G0645 Trochodendron aralioides HOM05D003020 ORTHO05D003226 2.2e-15 87.0 245 30.6
Actinidia26624 Actinidia chinensis HOM05D002163 ORTHO05D002386 2.9e-15 86.7 175 38.9
CiPaw.01G275300 Carya illinoinensis HOM05D010935 ORTHO05D010383 2.9e-15 86.7 234 35.0
PGSC0003DMG400016243 Solanum tuberosum HOM05D011460 ORTHO05D010383 5.0e-15 85.9 210 37.1
TAR625G0330 Trochodendron aralioides HOM05D003020 ORTHO05D003226 1.9e-14 84.0 249 33.3
vmacro21034 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 4.6e-13 79.3 92 51.1
TAR383G0288 Trochodendron aralioides HOM05D003020 ORTHO05D003226 1.0e-12 78.2 232 32.8
MD07G1177700 Malus domestica HOM05D010935 ORTHO05D010383 1.8e-12 77.4 232 33.2
Prupe.2G217100 Prunus persica HOM05D010935 ORTHO05D010383 6.7e-12 75.5 242 30.2
TAR383G0860 Trochodendron aralioides HOM05D003020 ORTHO05D003226 1.5e-11 74.3 264 31.1
MD01G1111500 Malus domestica HOM05D010935 ORTHO05D010383 1.3e-10 71.2 231 32.5
TAR626G0085 Trochodendron aralioides HOM05D003020 ORTHO05D003226 1.3e-10 71.2 257 30.4
Duzib150G1089 Durio zibethinus HOM05D003020 ORTHO05D003226 2.2e-10 70.5 210 32.4
TAR383G0698 Trochodendron aralioides HOM05D003020 ORTHO05D003226 4.8e-10 69.3 252 29.8
Hma1.2p1_1025F.1_g249270 Hydrangea macrophylla HOM05D003020 ORTHO05D003226 6.3e-10 68.9 262 28.2
Cpa.g.sc53.28 Carica papaya HOM05D003020 ORTHO05D003226 8.2e-10 68.6 236 31.8
Lj9P685T21 Lonicera japonica HOM05D003020 ORTHO05D003226 1.4e-09 67.8 212 32.5
Dinv41250 Davidia involucrata HOM05D003020 ORTHO05D003226 4.1e-09 66.2 252 28.2
MELO3C017464.2 Cucumis melo HOM05D003020 ORTHO05D003226 5.3e-09 65.9 249 29.3
Thecc.10G069600 Theobroma cacao HOM05D010162 ORTHO05D010383 5.3e-09 65.9 247 29.1
ClCG06G013330 Citrullus lanatus HOM05D003020 ORTHO05D003226 6.9e-09 65.5 247 28.3
Eucgr.G02810 Eucalyptus grandis HOM05D010935 ORTHO05D010383 6.9e-09 65.5 81 48.1
COL.COLO4_23723 Corchorus olitorius HOM05D010162 ORTHO05D010383 1.5e-08 64.3 246 28.5
Gohir.A08G084400 Gossypium hirsutum HOM05D003020 ORTHO05D003226 1.5e-08 64.3 256 32.0
COL.COLO4_35897 Corchorus olitorius HOM05D003020 ORTHO05D003226 3.4e-08 63.2 259 31.3
Duzib168G2116 Durio zibethinus HOM05D003020 ORTHO05D003226 3.4e-08 63.2 207 30.9
Gorai.004G031500 Gossypium raimondii HOM05D003020 ORTHO05D003226 3.4e-08 63.2 230 30.9
Thecc.09G173200 Theobroma cacao HOM05D003020 ORTHO05D003226 3.4e-08 63.2 245 30.2
Sed0024933 Sechium edule HOM05D003020 ORTHO05D003226 4.5e-08 62.8 242 30.6
Actinidia04141 Actinidia chinensis HOM05D003020 ORTHO05D003226 7.7e-08 62.0 245 29.4
TAR626G1849 Trochodendron aralioides HOM05D003020 ORTHO05D003226 1.0e-07 61.6 251 26.7
Sed0018084 Sechium edule HOM05D003020 ORTHO05D003226 1.7e-07 60.8 244 29.1
Manes.10G043900 Manihot esculenta HOM05D010162 ORTHO05D010383 3.8e-07 59.7 231 31.6
Medtr4g128160 Medicago truncatula HOM05D003020 ORTHO05D003226 3.8e-07 59.7 250 27.6
Prupe.2G217000 Prunus persica HOM05D010935 ORTHO05D010383 3.8e-07 59.7 225 28.0
CiPaw.07G192300 Carya illinoinensis HOM05D003020 ORTHO05D003226 5.0e-07 59.3 262 30.2
CiPaw.08G036400 Carya illinoinensis HOM05D003020 ORTHO05D003226 5.0e-07 59.3 239 29.7
Gohir.D08G094000 Gossypium hirsutum HOM05D003020 ORTHO05D003226 5.0e-07 59.3 253 31.2
Gorai.004G099800 Gossypium raimondii HOM05D003020 ORTHO05D003226 5.0e-07 59.3 81 45.7
Prupe.2G217400 Prunus persica HOM05D003020 ORTHO05D003226 5.0e-07 59.3 273 26.7
PGR102G0964 Punica granatum HOM05D003020 ORTHO05D003226 5.0e-07 59.3 295 27.5
MD07G1177600 Malus domestica HOM05D010935 ORTHO05D010383 6.5e-07 58.9 237 27.0
Ca_04389_v3 Cicer arietinum L. HOM05D009308 ORTHO05D011513 8.5e-07 58.5 85 44.7
CsaV3_1G031590 Cucumis sativus L. HOM05D003020 ORTHO05D003226 8.5e-07 58.5 250 29.6
Manes.14G153300 Manihot esculenta HOM05D003020 ORTHO05D003226 8.5e-07 58.5 251 29.5
Dinv31353 Davidia involucrata HOM05D003020 ORTHO05D003226 1.1e-06 58.2 209 34.0
Duzib170G0355 Durio zibethinus HOM05D003020 ORTHO05D003226 1.4e-06 57.8 244 30.3
Prupe.1G086100 Prunus persica HOM05D003020 ORTHO05D003226 1.4e-06 57.8 266 30.1
Dinv11798 Davidia involucrata HOM05D003020 ORTHO05D003226 1.9e-06 57.4 109 34.9
QL08p056680 Quercus lobata HOM05D003020 ORTHO05D003226 1.9e-06 57.4 291 29.2
TAR636G2901 Trochodendron aralioides HOM05D003020 ORTHO05D003226 1.9e-06 57.4 258 28.3
Lalb_Chr12g0199391 Lupinus albus HOM05D003020 ORTHO05D003226 2.5e-06 57.0 256 29.3
Haze_22098 Corylus avellana HOM05D003020 ORTHO05D003226 4.2e-06 56.2 242 29.8
FvH4_7g20010 Fragaria vesca HOM05D010935 ORTHO05D010383 5.5e-06 55.8 93 43.0
FAN03G3034 Fragaria x ananassa HOM05D010935 ORTHO05D010383 5.5e-06 55.8 93 43.0
FAN06G0306 Fragaria x ananassa HOM05D010935 ORTHO05D010383 5.5e-06 55.8 93 43.0
FAN10G0626 Fragaria x ananassa HOM05D003020 ORTHO05D003226 5.5e-06 55.8 250 29.6
Gohir.D08G033900 Gossypium hirsutum HOM05D003020 ORTHO05D003226 5.5e-06 55.8 229 27.1
Cfa013505 Carpinus fangiana HOM05D003020 ORTHO05D003226 7.2e-06 55.5 241 28.6
FvH4_7g20070 Fragaria vesca HOM05D003020 ORTHO05D003226 7.2e-06 55.5 250 30.0
FAN06G0496 Fragaria x ananassa HOM05D003020 ORTHO05D003226 7.2e-06 55.5 250 30.0
Gorai.013G026700 Gossypium raimondii HOM05D010162 ORTHO05D010383 7.2e-06 55.5 209 31.1
Oeu025224.1 Olea europaea HOM05D003020 ORTHO05D003226 7.2e-06 55.5 236 28.8
QL08p056651 Quercus lobata HOM05D000336 ORTHO05D002705 7.2e-06 55.5 242 29.3
Gohir.A08G023400 Gossypium hirsutum HOM05D003020 ORTHO05D003226 9.4e-06 55.1 231 26.0
MD13G1253900 Malus domestica HOM05D003020 ORTHO05D003226 9.4e-06 55.1 245 31.8
RcHm_v2.0_Chr1g0363961 Rosa chinensis HOM05D010935 ORTHO05D010383 9.4e-06 55.1 226 30.5
RcHm_v2.0_Chr1g0364021 Rosa chinensis HOM05D003020 ORTHO05D003226 9.4e-06 55.1 259 25.5


User provided reference genes

Program Settings