Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu026419.1 Olea europaea HOM05D001846 ORTHO05D005785 4.4e-274 947.6 570 100.0
Dinv36247 Davidia involucrata HOM05D001846 ORTHO05D005785 7.2e-107 392.1 576 50.7
SGA_v2.0_scaffold8G04581 Striga asiatica HOM05D001846 ORTHO05D005785 8.3e-95 352.1 602 43.2
TAR369G0438 Trochodendron aralioides HOM05D001846 ORTHO05D005785 8.8e-89 332.0 576 43.1
Sopen11g025350 Solanum pennellii HOM05D001846 ORTHO05D005785 9.8e-88 328.6 595 43.9
Solyc11g065630.3 Solanum lycopersicum HOM05D001846 ORTHO05D005785 1.3e-87 328.2 591 43.8
CAN.G71.16 Capsicum annuum HOM05D001846 ORTHO05D005785 8.3e-87 325.5 656 41.6
Peaxi162Scf00004g02629 Petunia axillaris HOM05D001846 ORTHO05D005785 2.4e-86 323.9 620 49.0
Nitab4.5_0002741g0070 Nicotiana tabacum HOM05D001846 ORTHO05D005785 7.8e-85 318.9 609 44.5
TAR369G0720 Trochodendron aralioides HOM05D001846 ORTHO05D005785 3.8e-84 316.6 576 45.0
QL01p004435 Quercus lobata HOM05D001846 ORTHO05D005785 8.9e-81 305.4 589 41.9
Thecc.09G236100 Theobroma cacao HOM05D001846 ORTHO05D005785 3.4e-80 303.5 582 44.3
QL01p004534 Quercus lobata HOM05D001846 ORTHO05D005785 1.7e-79 301.2 573 41.5
Cc01_g04530 Coffea canephora HOM05D001846 ORTHO05D005785 1.4e-78 298.1 569 43.9
GSVIVG01025241001 Vitis vinifera HOM05D001846 ORTHO05D005785 2.7e-77 293.9 580 39.8
Nitab4.5_0007154g0020 Nicotiana tabacum HOM05D001846 ORTHO05D005785 3.5e-77 293.5 613 48.6
Thecc.09G235700 Theobroma cacao HOM05D001846 ORTHO05D005785 4.6e-77 293.1 557 45.1
Migut.D00610 Erythranthe guttata HOM05D001846 ORTHO05D005785 1.0e-76 292.0 522 43.7
Duzib150G0388 Durio zibethinus HOM05D001846 ORTHO05D005785 1.3e-76 291.6 581 43.4
MSTRG.17597 Avicennia marina HOM05D001846 ORTHO05D005785 1.1e-75 288.5 577 40.9
Lsat_1_v5_gn_6_25301 Lactuca sativa HOM05D001846 ORTHO05D005785 4.3e-75 286.6 545 41.3
TWI60G1588 Tripterygium wilfordii HOM05D001846 ORTHO05D005785 5.6e-75 286.2 578 42.7
Hma1.2p1_1313F.1_g274970 Hydrangea macrophylla HOM05D001846 ORTHO05D005785 1.1e-73 282.0 601 40.8
Actinidia06915 Actinidia chinensis HOM05D001846 ORTHO05D005785 2.3e-73 280.8 395 48.4
Cfa009785 Carpinus fangiana HOM05D001846 ORTHO05D005785 5.8e-72 276.2 586 44.0
Dinv22169 Davidia involucrata HOM05D001846 ORTHO05D005785 7.5e-72 275.8 514 43.2
Duzib168G1640 Durio zibethinus HOM05D001846 ORTHO05D005785 1.7e-71 274.6 596 43.6
FvH4_3g28690 Fragaria vesca HOM05D001846 ORTHO05D005785 3.7e-71 273.5 575 45.4
Actinidia16341 Actinidia chinensis HOM05D001846 ORTHO05D005785 1.1e-70 271.9 558 39.4
ECA233G5307 Erigeron canadensis HOM05D001846 ORTHO05D005785 1.4e-70 271.6 593 38.3
VMungo1127G1936 Vigna mungo HOM05D001846 ORTHO05D005785 1.9e-70 271.2 561 38.9
Atru.chr3.2697 Acer truncatum HOM05D001846 ORTHO05D005785 2.4e-70 270.8 585 39.7
RcHm_v2.0_Chr5g0052391 Rosa chinensis HOM05D001846 ORTHO05D005785 4.1e-70 270.0 518 48.3
Haze_23151 Corylus avellana HOM05D001846 ORTHO05D005785 9.2e-70 268.9 584 43.3
HanXRQChr13g0401091 Helianthus annuus HOM05D001846 ORTHO05D005785 1.2e-69 268.5 566 39.9
MD11G1191400 Malus domestica HOM05D001846 ORTHO05D005785 1.2e-69 268.5 570 43.9
Prupe.4G251400 Prunus persica HOM05D001846 ORTHO05D005785 2.7e-69 267.3 566 44.9
FAN11G2083 Fragaria x ananassa HOM05D001846 ORTHO05D005785 5.6e-67 259.6 598 43.5
Phvul.011G021900 Phaseolus vulgaris HOM05D001846 ORTHO05D005785 9.5e-67 258.8 561 38.1
FAN21G3148 Fragaria x ananassa HOM05D001846 ORTHO05D005785 2.1e-66 257.7 579 44.4
MSTRG.12465 Avicennia marina HOM05D001846 ORTHO05D005785 2.8e-66 257.3 580 38.3
Cpa.g.sc84.42 Carica papaya HOM05D001846 ORTHO05D005785 3.6e-66 256.9 564 37.1
CiPaw.13G159200 Carya illinoinensis HOM05D001846 ORTHO05D005785 1.1e-65 255.4 563 38.7
FAN16G0902 Fragaria x ananassa HOM05D001846 ORTHO05D005785 3.4e-64 250.4 603 40.8
Lj3g0017471 Lotus japonicus HOM05D001846 ORTHO05D005785 7.5e-64 249.2 512 39.3
Aqoxy2G00165 Aquilegia oxysepala HOM05D001846 ORTHO05D005785 2.2e-63 247.7 494 42.5
Ciclev10014939m.g Citrus clementina HOM05D001846 ORTHO05D005785 2.2e-63 247.7 575 35.5
AUR62000135 Chenopodium quinoa HOM05D001846 ORTHO05D005785 6.4e-63 246.1 583 39.1
Glyma.11G093300 Glycine max HOM05D001846 ORTHO05D005785 1.4e-62 245.0 563 36.1
Sabra09G0038200 Salix brachista HOM05D001846 ORTHO05D005785 5.4e-62 243.0 560 38.4
AUR62019315 Chenopodium quinoa HOM05D001846 ORTHO05D005785 2.1e-61 241.1 584 36.0
Nn7g36246 Nelumbo nucifera HOM05D001846 ORTHO05D005785 2.7e-61 240.7 448 40.8
Sc16g0011440 Simmondsia chinensis HOM05D001846 ORTHO05D005785 2.7e-61 240.7 576 35.8
CANSAT54G0460 Cannabis sativa HOM05D001846 ORTHO05D005785 4.6e-61 240.0 586 37.4
FAN25G3740 Fragaria x ananassa HOM05D001846 ORTHO05D005785 4.6e-61 240.0 481 48.0
MSTRG.18433 Avicennia marina HOM05D001846 ORTHO05D005785 6.0e-61 239.6 327 48.9
vmacro04149 Vaccinium macrocarpon HOM05D001846 ORTHO05D005785 1.7e-60 238.0 575 40.7
Potri.009G052400 Populus trichocarpa HOM05D001846 ORTHO05D005785 3.9e-60 236.9 569 37.4
SalBow1G1572 Salvia bowleyana HOM05D001846 ORTHO05D005785 3.9e-60 236.9 568 35.7
Ca_18965_v3 Cicer arietinum L. HOM05D001846 ORTHO05D005785 5.1e-60 236.5 524 42.9
Lj1A326G19 Lonicera japonica HOM05D001846 ORTHO05D005785 5.1e-60 236.5 469 39.7
Glyma.12G019500 Glycine max HOM05D001846 ORTHO05D005785 6.6e-60 236.1 484 37.8
Eucgr.J00759 Eucalyptus grandis HOM05D001846 ORTHO05D005785 2.5e-59 234.2 582 35.7
Ah.06g194060 Amaranthus hybridus HOM05D001846 ORTHO05D005785 3.3e-59 233.8 572 35.3
Oeu016678.1 Olea europaea HOM05D001846 ORTHO05D005785 7.3e-59 232.6 483 39.5
EL10Ac4g10235 Beta vulgaris HOM05D001846 ORTHO05D005785 2.8e-58 230.7 571 36.8
Lalb_Chr19g0139851 Lupinus albus HOM05D001846 ORTHO05D005785 2.8e-58 230.7 550 40.7
Sabra16G0155900 Salix brachista HOM05D001846 ORTHO05D005785 3.6e-58 230.3 568 36.8
Potri.001G256700 Populus trichocarpa HOM05D001846 ORTHO05D005785 1.8e-57 228.0 564 38.1
PSO700G0220 Papaver somniferum HOM05D001846 ORTHO05D005785 2.4e-57 227.6 610 35.4
Manes.14G003700 Manihot esculenta HOM05D001846 ORTHO05D005785 5.2e-57 226.5 569 36.2
PSO170G6025 Papaver somniferum HOM05D001846 ORTHO05D005785 5.2e-57 226.5 608 35.7
CiPaw.14G118000 Carya illinoinensis HOM05D001846 ORTHO05D005785 1.2e-56 225.3 416 40.9
MD03G1173500 Malus domestica HOM05D001846 ORTHO05D005785 7.6e-56 222.6 578 41.5
Gohir.D13G220500 Gossypium hirsutum HOM05D001846 ORTHO05D005785 2.9e-55 220.7 561 35.3
DCAR_023761 Daucus carota HOM05D001846 ORTHO05D005785 3.8e-55 220.3 596 35.9
Gohir.D09G110300 Gossypium hirsutum HOM05D001846 ORTHO05D005785 4.9e-55 219.9 572 36.7
Rhsim13G0220400 Rhododendron simsii HOM05D001846 ORTHO05D005785 1.9e-54 218.0 573 39.3
Psat7g170880 Pisum sativum HOM05D001846 ORTHO05D005785 5.4e-54 216.5 477 44.0
Gorai.006G127900 Gossypium raimondii HOM05D001846 ORTHO05D005785 1.6e-53 214.9 572 37.4
PGR119G1478 Punica granatum HOM05D001846 ORTHO05D005785 2.7e-53 214.2 528 38.1
Lj3g0008415 Lotus japonicus HOM05D001846 ORTHO05D005785 4.6e-53 213.4 511 38.4
Lj3g0026618 Lotus japonicus HOM05D001846 ORTHO05D005785 4.6e-53 213.4 511 38.4
COL.COLO4_06126 Corchorus olitorius HOM05D001846 ORTHO05D005785 6.6e-52 209.5 399 44.9
Medtr4g077160 Medicago truncatula HOM05D001846 ORTHO05D005785 8.6e-52 209.1 558 41.9
Manes.06G163200 Manihot esculenta HOM05D001846 ORTHO05D005785 1.9e-51 208.0 565 32.7
ClCG02G023130 Citrullus lanatus HOM05D001846 ORTHO05D005785 5.6e-51 206.5 499 36.5
Hund22024 Selenicereus undatus HOM05D001846 ORTHO05D005785 6.9e-49 199.5 576 33.7
CsaV3_6G039320 Cucumis sativus L. HOM05D001846 ORTHO05D005785 2.6e-48 197.6 459 38.6
Sed0016770 Sechium edule HOM05D001846 ORTHO05D005785 3.8e-47 193.7 387 38.0
HanXRQChr02g0051491 Helianthus annuus HOM05D001846 ORTHO05D005785 1.9e-46 191.4 579 34.9
Gorai.013G251400 Gossypium raimondii HOM05D001846 ORTHO05D005785 3.2e-46 190.7 616 32.3
MELO3C014586.2 Cucumis melo HOM05D001846 ORTHO05D005785 1.6e-45 188.3 384 37.0
MSTRG.21370 Avicennia marina HOM05D001846 ORTHO05D005785 2.1e-45 188.0 273 46.2
MBI04_g43760_MAGBIO Magnolia biondii HOM05D001846 ORTHO05D005785 1.3e-44 185.3 480 39.0
Thhalv10011423m.g Eutrema salsugineum HOM05D001846 ORTHO05D005785 5.3e-41 173.3 465 40.0
Carub.0001s4028 Capsella rubella HOM05D001846 ORTHO05D005785 1.5e-40 171.8 471 38.4
AT1G51405 Arabidopsis thaliana HOM05D001846 ORTHO05D005785 2.6e-40 171.0 470 39.4
arahy.Tifrunner.gnm1.ann1.563I02 Arachis hypogaea HOM05D001846 ORTHO05D005785 3.4e-40 170.6 389 41.6
arahy.Tifrunner.gnm1.ann1.8PYD8T Arachis hypogaea HOM05D001846 ORTHO05D005785 4.5e-40 170.2 384 39.6
THA.LOC104811173 Tarenaya hassleriana HOM05D001846 ORTHO05D005785 1.7e-39 168.3 465 37.4
Sp1g38080 Schrenkiella parvula HOM05D001846 ORTHO05D005785 3.8e-39 167.2 471 41.8
CARHR041560 Cardamine hirsuta HOM05D001846 ORTHO05D005785 1.4e-38 165.2 469 42.9
CDE05G0547 Ceratophyllum demersum HOM05D001846 ORTHO05D005785 4.2e-38 163.7 469 32.8
Aa31LG10G3580 Aethionema arabicum HOM05D000089 ORTHO05D005785 9.3e-38 162.5 453 40.8
FAN25G3220 Fragaria x ananassa HOM05D001846 ORTHO05D005785 4.6e-37 160.2 321 42.1
PGSC0003DMG400010305 Solanum tuberosum HOM05D001846 ORTHO05D005785 3.7e-34 150.6 317 43.5
AL1G59260 Arabidopsis lyrata HOM05D001846 ORTHO05D005785 1.8e-33 148.3 461 43.0
THA.LOC104817913 Tarenaya hassleriana HOM05D001846 ORTHO05D005785 3.4e-32 144.1 457 30.6
FAN25G3801 Fragaria x ananassa HOM05D001846 ORTHO05D005785 2.2e-31 141.4 491 31.8
SGA_v2.0_scaffold247G44890 Striga asiatica HOM05D001846 ORTHO05D005785 1.4e-30 138.7 272 45.2
BcaB07g33587 Brassica carinata HOM05D001846 ORTHO05D005785 2.4e-30 137.9 441 39.9
SEGI_01920 Sequoiadendron giganteum HOM05D001846 ORTHO05D005785 4.2e-30 137.1 501 30.3
BraA06t23456Z Brassica rapa HOM05D001846 ORTHO05D005785 1.2e-29 135.6 433 34.4
Actinidia26798 Actinidia chinensis HOM05D001846 ORTHO05D005785 4.6e-29 133.7 201 44.3
BcaB04g17234 Brassica carinata HOM05D001846 ORTHO05D005785 7.9e-29 132.9 463 39.1
MBI04_g45701_MAGBIO Magnolia biondii HOM05D001846 ORTHO05D005785 1.8e-28 131.7 272 44.9
A06p02500 Brassica napus HOM05D001846 ORTHO05D005785 6.7e-28 129.8 438 38.6
BolC3t21298H Brassica oleracea HOM05D001846 ORTHO05D005785 2.5e-27 127.9 471 34.0
C06p06570 Brassica napus HOM05D001846 ORTHO05D005785 3.3e-27 127.5 433 38.3
BcaC08g43310 Brassica carinata HOM05D001846 ORTHO05D005785 1.3e-26 125.6 433 38.6
C03p89760 Brassica napus HOM05D001846 ORTHO05D005785 2.8e-26 124.4 470 34.3
BraA08t32338Z Brassica rapa HOM05D001846 ORTHO05D005785 4.8e-26 123.6 469 36.2
BolC6t35770H Brassica oleracea HOM05D001846 ORTHO05D005785 1.1e-25 122.5 433 38.1
BcaC01g01249 Brassica carinata HOM05D001846 ORTHO05D005785 3.1e-25 120.9 471 33.8
ATR0332G095 Amborella trichopoda HOM05D001846 ORTHO05D005785 5.3e-25 120.2 554 25.6
A08p03060 Brassica napus HOM05D001846 ORTHO05D005785 5.3e-25 120.2 469 37.1
Gohir.A09G113600 Gossypium hirsutum HOM05D001846 ORTHO05D005785 6.5e-23 113.2 338 37.9
MSTRG.18434 Avicennia marina HOM05D001846 ORTHO05D005785 1.6e-21 108.6 240 41.7
Zm00001eb400050 Zea mays HOM05D001846 ORTHO05D005785 3.0e-20 104.4 369 27.6
CDE05G3609 Ceratophyllum demersum HOM05D001846 ORTHO05D005785 8.7e-20 102.8 309 32.7
Zm00001eb008800 Zea mays HOM05D001846 ORTHO05D005785 1.5e-19 102.1 334 29.6
Nn6g35051 Nelumbo nucifera HOM05D001846 ORTHO05D005785 9.0e-17 92.8 127 40.9
HPP92_007908 Vanilla planifolia HOM05D001846 ORTHO05D005785 3.4e-16 90.9 255 33.3
Glyma.06G203350 Glycine max HOM05D001846 ORTHO05D005785 1.3e-15 89.0 139 47.5
QL02p066233 Quercus lobata HOM05D001846 ORTHO05D005785 6.5e-15 86.7 84 59.5
Nn2g13769 Nelumbo nucifera HOM05D001846 ORTHO05D005785 8.5e-15 86.3 297 32.3
CDE05G1816 Ceratophyllum demersum HOM05D001846 ORTHO05D005785 1.0e-12 79.3 112 42.9
Gohir.A09G113700 Gossypium hirsutum HOM05D001846 ORTHO05D005785 4.1e-09 67.4 188 33.0
Os03g0216900 Oryza sativa ssp. japonica HOM05D001846 ORTHO05D005785 2.6e-08 64.7 125 36.0
Zm00001eb393780 Zea mays HOM05D001846 ORTHO05D005785 1.7e-07 62.0 56 51.8
MBI04_g34435_MAGBIO Magnolia biondii HOM05D001846 ORTHO05D005785 2.5e-06 58.2 55 56.4
QL10p038631 Quercus lobata HOM05D001846 ORTHO05D005785 2.5e-06 58.2 92 44.6


User provided reference genes

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