Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu026406.1 Olea europaea HOM05D006954 ORTHO05D008729 2.6e-250 868.2 434 100.0
Dinv21639 Davidia involucrata HOM05D006954 ORTHO05D008729 5.5e-83 312.4 379 51.2
QL12p012133 Quercus lobata HOM05D006954 ORTHO05D008729 5.5e-67 259.2 370 44.1
Manes.01G080700 Manihot esculenta HOM05D006954 ORTHO05D008729 9.8e-56 221.9 370 41.4
Rhsim07G0108500 Rhododendron simsii HOM05D001088 ORTHO05D002099 7.0e-54 215.7 367 41.1
vmacro14083 Vaccinium macrocarpon HOM05D006954 ORTHO05D008729 1.6e-53 214.5 377 39.8
Ciclev10019520m.g Citrus clementina HOM05D006954 ORTHO05D008729 1.1e-51 208.4 268 43.7
TAR375G0455 Trochodendron aralioides HOM05D006954 ORTHO05D008729 2.0e-48 197.6 387 38.5
TAR375G1092 Trochodendron aralioides HOM05D006954 ORTHO05D008729 2.0e-48 197.6 387 38.5
Actinidia27466 Actinidia chinensis HOM05D001088 ORTHO05D002099 7.8e-45 185.7 302 45.4
Aqoxy7G00762 Aquilegia oxysepala HOM05D006954 ORTHO05D008729 6.6e-44 182.6 382 35.1
Lj2A217G32 Lonicera japonica HOM05D006954 ORTHO05D008729 1.1e-43 181.8 341 38.4
DCAR_006832 Daucus carota HOM05D001088 ORTHO05D002099 3.1e-41 173.7 355 40.3
ECA233G0962 Erigeron canadensis HOM05D006954 ORTHO05D008729 4.0e-41 173.3 242 43.4
CiPaw.14G025200 Carya illinoinensis HOM05D006954 ORTHO05D008729 5.8e-40 169.5 312 41.7
Hma1.2p1_0316F.1_g123150 Hydrangea macrophylla HOM05D006954 ORTHO05D008729 7.6e-40 169.1 329 38.0
Lj8P262T33 Lonicera japonica HOM05D006954 ORTHO05D008729 2.2e-39 167.5 320 40.6
Haze_02712 Corylus avellana HOM05D006954 ORTHO05D008729 2.4e-38 164.1 324 39.8
Dinv43668 Davidia involucrata HOM05D006954 ORTHO05D008729 2.4e-38 164.1 297 38.4
TWI59G0609 Tripterygium wilfordii HOM05D006954 ORTHO05D008729 7.8e-37 159.1 317 37.9
Eucgr.E00424 Eucalyptus grandis HOM05D006954 ORTHO05D008729 1.7e-36 157.9 345 35.9
Lj6C70T9 Lonicera japonica HOM05D006954 ORTHO05D008729 2.3e-36 157.5 309 38.8
Atru.chr5.233 Acer truncatum HOM05D006954 ORTHO05D008729 5.1e-36 156.4 258 38.0
Duzib133G0753 Durio zibethinus HOM05D006954 ORTHO05D008729 5.1e-36 156.4 341 37.8
QL04p036098 Quercus lobata HOM05D006954 ORTHO05D008729 3.3e-35 153.7 334 36.8
Cfa011147 Carpinus fangiana HOM05D001088 ORTHO05D002099 4.3e-35 153.3 324 37.7
PSO017G4363 Papaver somniferum HOM05D006954 ORTHO05D008729 7.3e-35 152.5 357 34.2
Duzib205G0178 Durio zibethinus HOM05D006954 ORTHO05D008729 9.6e-35 152.1 384 33.6
Nitab4.5_0000618g0050 Nicotiana tabacum HOM05D020458 ORTHO05D022160 1.6e-34 151.4 267 40.4
Prupe.2G137000 Prunus persica HOM05D006954 ORTHO05D008729 2.1e-34 151.0 324 35.5
FAN01G1544 Fragaria x ananassa HOM05D006954 ORTHO05D008729 4.7e-34 149.8 331 36.6
TAR636G1544 Trochodendron aralioides HOM05D006954 ORTHO05D008729 8.1e-34 149.1 186 47.8
Duzib136G0004 Durio zibethinus HOM05D006954 ORTHO05D008729 1.8e-33 147.9 391 34.3
COL.COLO4_12483 Corchorus olitorius HOM05D006954 ORTHO05D008729 2.4e-33 147.5 330 33.9
FAN06G0609 Fragaria x ananassa HOM05D006954 ORTHO05D008729 2.4e-33 147.5 349 35.5
Gohir.A07G147000 Gossypium hirsutum HOM05D006954 ORTHO05D008729 2.4e-33 147.5 342 34.5
QL04p036667 Quercus lobata HOM05D006954 ORTHO05D008729 3.1e-33 147.1 314 36.6
QL04p036448 Quercus lobata HOM05D006954 ORTHO05D008729 1.2e-32 145.2 334 35.9
FAN10G2562 Fragaria x ananassa HOM05D006954 ORTHO05D008729 1.5e-32 144.8 349 35.2
FAN03G1627 Fragaria x ananassa HOM05D006954 ORTHO05D008729 2.0e-32 144.4 340 35.6
PGSC0003DMG400026019 Solanum tuberosum HOM05D006954 ORTHO05D008729 2.0e-32 144.4 302 33.4
Ciclev10023836m.g Citrus clementina HOM05D006638 ORTHO05D008246 2.6e-32 144.1 246 37.8
PSO170G0413 Papaver somniferum HOM05D006954 ORTHO05D008729 4.4e-32 143.3 347 34.3
MD02G1210900 Malus domestica HOM05D006954 ORTHO05D008729 5.8e-32 142.9 343 35.9
FAN06G1022 Fragaria x ananassa HOM05D006954 ORTHO05D008729 1.3e-31 141.7 349 34.7
HanXRQChr16g0511611 Helianthus annuus HOM05D006954 ORTHO05D008729 1.3e-31 141.7 351 32.5
SHI20280 Sapria himalayana HOM05D006954 ORTHO05D008729 1.3e-31 141.7 300 35.3
GSVIVG01018156001 Vitis vinifera HOM05D006638 ORTHO05D008246 2.2e-31 141.0 300 34.7
RcHm_v2.0_Chr7g0203321 Rosa chinensis HOM05D006954 ORTHO05D008729 3.8e-31 140.2 363 31.7
Sopen01g036590 Solanum pennellii HOM05D006954 ORTHO05D008729 4.9e-31 139.8 302 32.8
Nitab4.5_0001076g0060 Nicotiana tabacum HOM05D020458 ORTHO05D022160 8.4e-31 139.0 265 38.5
Thecc.01G384400 Theobroma cacao HOM05D006954 ORTHO05D008729 1.4e-30 138.3 352 35.2
Oeu009770.1 Olea europaea HOM05D006954 ORTHO05D008729 2.4e-30 137.5 223 40.4
AUR62013686 Chenopodium quinoa HOM05D006954 ORTHO05D008729 4.2e-30 136.7 303 32.3
FAN10G3525 Fragaria x ananassa HOM05D006954 ORTHO05D008729 4.2e-30 136.7 342 34.8
EL10Ac1g00835 Beta vulgaris HOM05D006954 ORTHO05D008729 5.4e-30 136.3 231 36.4
Gohir.D07G153000 Gossypium hirsutum HOM05D006954 ORTHO05D008729 9.3e-30 135.6 369 32.5
Gorai.001G175100 Gossypium raimondii HOM05D006954 ORTHO05D008729 9.3e-30 135.6 365 32.9
MD07G1114400 Malus domestica HOM05D006954 ORTHO05D008729 9.3e-30 135.6 352 33.0
Solyc01g090850.3 Solanum lycopersicum HOM05D006954 ORTHO05D008729 1.6e-29 134.8 302 33.1
Prupe.5G069800 Prunus persica HOM05D006954 ORTHO05D008729 1.0e-28 132.1 338 32.2
RcHm_v2.0_Chr1g0349021 Rosa chinensis HOM05D006954 ORTHO05D008729 1.0e-28 132.1 341 34.3
AUR62004161 Chenopodium quinoa HOM05D006954 ORTHO05D008729 1.3e-28 131.7 316 30.4
Nitab4.5_0011151g0020 Nicotiana tabacum HOM05D006954 ORTHO05D008729 5.1e-28 129.8 398 31.4
Rhsim07G0031700 Rhododendron simsii HOM05D001088 ORTHO05D002099 8.7e-28 129.0 223 37.2
Hund17048 Selenicereus undatus HOM05D006954 ORTHO05D008729 1.5e-27 128.3 281 33.5
FAN04G0536 Fragaria x ananassa HOM05D006954 ORTHO05D008729 1.9e-27 127.9 320 32.5
Ah.05g173790 Amaranthus hybridus HOM05D006954 ORTHO05D008729 2.5e-27 127.5 256 33.2
FAN13G0002 Fragaria x ananassa HOM05D006954 ORTHO05D008729 3.3e-27 127.1 323 33.7
Oeu031219.1 Olea europaea HOM05D006954 ORTHO05D008729 4.3e-27 126.7 221 38.9
CAN.G1872.2 Capsicum annuum HOM05D006954 ORTHO05D008729 7.3e-27 125.9 269 33.8
Glyma.11G167382 Glycine max HOM05D006954 ORTHO05D008729 3.6e-26 123.6 371 31.0
arahy.Tifrunner.gnm1.ann1.LN378K Arachis hypogaea HOM05D006954 ORTHO05D008729 8.1e-26 122.5 226 35.4
COL.COLO4_37173 Corchorus olitorius HOM05D006954 ORTHO05D008729 1.1e-25 122.1 382 30.4
FvH4_5g18930 Fragaria vesca HOM05D006954 ORTHO05D008729 1.4e-25 121.7 321 32.4
Hma1.2p1_0041F.1_g025380 Hydrangea macrophylla HOM05D006954 ORTHO05D008729 1.4e-25 121.7 217 36.9
Nitab4.5_0000859g0170 Nicotiana tabacum HOM05D006954 ORTHO05D008729 1.4e-25 121.7 310 33.5
arahy.Tifrunner.gnm1.ann1.UR8A7Q Arachis hypogaea HOM05D006954 ORTHO05D008729 5.3e-25 119.8 225 35.1
FAN18G2950 Fragaria x ananassa HOM05D006954 ORTHO05D008729 5.3e-25 119.8 321 32.1
Peaxi162Scf00803g00025 Petunia axillaris HOM05D006954 ORTHO05D008729 5.3e-25 119.8 341 33.1
SalBow5G1520 Salvia bowleyana HOM05D006954 ORTHO05D008729 4.4e-24 116.7 217 35.9
Thecc.03G251300 Theobroma cacao HOM05D006954 ORTHO05D008729 1.3e-23 115.2 135 47.4
CDE11G0492 Ceratophyllum demersum HOM05D006954 ORTHO05D008729 1.7e-23 114.8 201 33.8
Lalb_Chr01g0021361 Lupinus albus HOM05D006954 ORTHO05D008729 2.2e-23 114.4 380 31.1
Sc02g0002800 Simmondsia chinensis HOM05D006954 ORTHO05D008729 2.2e-23 114.4 252 34.1
VMungo1383G2724 Vigna mungo HOM05D006954 ORTHO05D008729 6.4e-23 112.8 314 32.5
Lalb_Chr07g0190311 Lupinus albus HOM05D006954 ORTHO05D008729 2.4e-22 110.9 340 30.9
PGSC0003DMG400011881 Solanum tuberosum HOM05D020458 ORTHO05D022160 4.2e-22 110.2 155 43.2
Ca_19859_v3 Cicer arietinum L. HOM05D006954 ORTHO05D008729 1.2e-21 108.6 274 31.8
Glyma.01G134400 Glycine max HOM05D006954 ORTHO05D008729 3.0e-20 104.0 233 33.0
HPP92_008568 Vanilla planifolia HOM05D006954 ORTHO05D008729 5.1e-20 103.2 329 32.2
Sopen06g020850 Solanum pennellii HOM05D020458 ORTHO05D022160 8.7e-20 102.4 332 26.5
Glyma.03G033300 Glycine max HOM05D006954 ORTHO05D008729 1.1e-19 102.1 224 32.1
Solyc06g060730.3 Solanum lycopersicum HOM05D020458 ORTHO05D022160 1.9e-19 101.3 118 44.9
Phvul.008G143700 Phaseolus vulgaris HOM05D006954 ORTHO05D008729 2.5e-19 100.9 364 29.1
MBI04_g09501_MAGBIO Magnolia biondii HOM05D006954 ORTHO05D008729 9.6e-19 99.0 228 32.0
Zm00001eb023500 Zea mays HOM05D006954 ORTHO05D008729 9.6e-19 99.0 299 29.8
Phvul.010G071500 Phaseolus vulgaris HOM05D006954 ORTHO05D008729 2.1e-18 97.8 331 29.9
Lj3g0019070 Lotus japonicus HOM05D006954 ORTHO05D008729 1.1e-17 95.5 320 30.6
ATR0317G083 Amborella trichopoda HOM05D006954 ORTHO05D008729 1.8e-17 94.7 276 29.7
arahy.Tifrunner.gnm1.ann1.7WP6A4 Arachis hypogaea HOM05D006954 ORTHO05D008729 1.8e-17 94.7 229 31.9
Psat0s3685g0160 Pisum sativum HOM05D006954 ORTHO05D008729 2.4e-17 94.4 273 28.6
arahy.Tifrunner.gnm1.ann1.ADMQ1S Arachis hypogaea HOM05D006954 ORTHO05D008729 4.0e-17 93.6 228 30.3
Zm00001eb391500 Zea mays HOM05D006954 ORTHO05D008729 4.0e-17 93.6 255 29.8
PGR042G3906 Punica granatum HOM05D006954 ORTHO05D008729 9.0e-17 92.4 296 29.1
Lsat_1_v5_gn_7_8881 Lactuca sativa HOM05D006954 ORTHO05D008729 5.8e-16 89.7 218 29.4
SGA_v2.0_scaffold11G05525 Striga asiatica HOM05D006954 ORTHO05D008729 5.8e-16 89.7 305 25.9
Lj9P565T15 Lonicera japonica HOM05D006954 ORTHO05D008729 1.3e-15 88.6 140 37.9
ECA236G3196 Erigeron canadensis HOM05D006954 ORTHO05D008729 1.7e-15 88.2 237 30.8
HanXRQChr06g0168891 Helianthus annuus HOM05D006954 ORTHO05D008729 2.2e-15 87.8 217 28.1
HanXRQChr06g0169051 Helianthus annuus HOM05D006954 ORTHO05D008729 2.2e-15 87.8 217 28.1
TPR.G4994 Trifolium pratense HOM05D006954 ORTHO05D008246 2.9e-15 87.4 259 30.1
CDE09G0910 Ceratophyllum demersum HOM05D006954 ORTHO05D008729 3.8e-15 87.0 205 34.1
Nn3g17397 Nelumbo nucifera HOM05D005220 ORTHO05D006082 2.1e-10 71.2 223 28.3
Duzib205G0201 Durio zibethinus HOM05D005220 ORTHO05D006082 1.4e-09 68.6 194 25.8
Nn6g33957 Nelumbo nucifera HOM05D006954 ORTHO05D008729 1.4e-09 68.6 148 37.2
Ah.11g047990 Amaranthus hybridus HOM05D005220 ORTHO05D006082 4.0e-09 67.0 257 25.7
Phvul.008G035000 Phaseolus vulgaris HOM05D005220 ORTHO05D006082 1.2e-08 65.5 202 24.3
Cc07_g04000 Coffea canephora HOM05D005220 ORTHO05D006082 2.0e-08 64.7 198 25.8
MSTRG.23894 Avicennia marina HOM05D005220 ORTHO05D006082 2.6e-08 64.3 203 27.1
Haze_07684 Corylus avellana HOM05D005220 ORTHO05D006082 2.6e-08 64.3 201 27.4
TAR629G0541 Trochodendron aralioides HOM05D005220 ORTHO05D006082 2.6e-08 64.3 194 30.4
Cfa019301 Carpinus fangiana HOM05D005220 ORTHO05D006082 3.4e-08 63.9 216 25.0
Glyma.08G242800 Glycine max HOM05D005220 ORTHO05D006082 4.5e-08 63.5 198 25.3
Hund02604 Selenicereus undatus HOM05D005220 ORTHO05D006082 4.5e-08 63.5 229 23.6
ClCG06G015820 Citrullus lanatus HOM05D005220 ORTHO05D006082 7.6e-08 62.8 263 24.7
Dinv33817 Davidia involucrata HOM05D005220 ORTHO05D006082 7.6e-08 62.8 195 26.7
TAR622G0939 Trochodendron aralioides HOM05D005220 ORTHO05D006082 7.6e-08 62.8 195 27.7
PSO302G0007 Papaver somniferum HOM05D005220 ORTHO05D006082 1.0e-07 62.4 200 23.5
MELO3C017209.2 Cucumis melo HOM05D005220 ORTHO05D006082 1.3e-07 62.0 214 27.1
Sed0005854 Sechium edule HOM05D005220 ORTHO05D006082 1.7e-07 61.6 259 22.8
Ciclev10020317m.g Citrus clementina HOM05D005220 ORTHO05D006082 2.9e-07 60.8 197 24.9
Lsat_1_v5_gn_5_21940 Lactuca sativa HOM05D005220 ORTHO05D006082 2.9e-07 60.8 196 28.1
Oeu062150.1 Olea europaea HOM05D005220 ORTHO05D006082 2.9e-07 60.8 239 22.2
Hma1.2p1_0481F.1_g161950 Hydrangea macrophylla HOM05D005220 ORTHO05D006082 3.8e-07 60.5 195 26.2
Glyma.18G265000 Glycine max HOM05D005220 ORTHO05D006082 6.5e-07 59.7 198 22.7
Lj1g0008070 Lotus japonicus HOM05D005220 ORTHO05D006082 6.5e-07 59.7 198 26.3
Psat7g133400 Pisum sativum HOM05D005220 ORTHO05D006082 6.5e-07 59.7 203 25.1
Manes.01G098100 Manihot esculenta HOM05D005220 ORTHO05D006082 8.4e-07 59.3 211 25.1
PSO478G1432 Papaver somniferum HOM05D005220 ORTHO05D006082 8.4e-07 59.3 248 24.2
Potri.017G091700 Populus trichocarpa HOM05D005220 ORTHO05D006082 8.4e-07 59.3 230 24.3
SalBow1G1470 Salvia bowleyana HOM05D005220 ORTHO05D006082 8.4e-07 59.3 197 25.4
TAR374G0076 Trochodendron aralioides HOM05D005220 ORTHO05D006082 8.4e-07 59.3 270 22.6
VMungo1383G2795 Vigna mungo HOM05D005220 ORTHO05D006082 8.4e-07 59.3 239 24.3
CDE10G0382 Ceratophyllum demersum HOM05D005220 ORTHO05D006082 1.1e-06 58.9 199 25.6
MSTRG.3015 Avicennia marina HOM05D005220 ORTHO05D006082 1.4e-06 58.5 266 25.9
CsaV3_1G002740 Cucumis sativus L. HOM05D005220 ORTHO05D006082 1.4e-06 58.5 214 23.4
Lj1g0005307 Lotus japonicus HOM05D005220 ORTHO05D006082 1.4e-06 58.5 223 23.8
Lalb_Chr17g0337031 Lupinus albus HOM05D005220 ORTHO05D006082 1.4e-06 58.5 200 26.5
PSO017G3052 Papaver somniferum HOM05D005220 ORTHO05D006082 1.9e-06 58.2 194 24.7
CiPaw.11G050100 Carya illinoinensis HOM05D005220 ORTHO05D006082 2.5e-06 57.8 194 24.2
GSVIVG01011505001 Vitis vinifera HOM05D005220 ORTHO05D006082 2.5e-06 57.8 195 26.7
Actinidia07816 Actinidia chinensis HOM05D005220 ORTHO05D006082 3.2e-06 57.4 195 25.1
arahy.Tifrunner.gnm1.ann1.UWUI2N Arachis hypogaea HOM05D005220 ORTHO05D006082 3.2e-06 57.4 215 23.3
AUR62008499 Chenopodium quinoa HOM05D005220 ORTHO05D006082 3.2e-06 57.4 235 23.8
DCAR_011050 Daucus carota HOM05D005220 ORTHO05D006082 3.2e-06 57.4 192 27.1
CSS0002601 Camellia sinensis var. sinensis HOM05D005220 ORTHO05D006082 4.2e-06 57.0 240 24.6
Oeu010241.1 Olea europaea HOM05D005220 ORTHO05D006082 4.2e-06 57.0 195 22.6
AUR62021593 Chenopodium quinoa HOM05D005220 ORTHO05D006082 5.5e-06 56.6 254 24.4
Carub.0008s2185 Capsella rubella HOM05D001456 ORTHO05D002799 7.1e-06 56.2 213 23.5
Dinv34960 Davidia involucrata HOM05D005220 ORTHO05D006082 7.1e-06 56.2 195 27.2
Lsat_1_v5_gn_2_87740 Lactuca sativa HOM05D005220 ORTHO05D006082 7.1e-06 56.2 194 24.2
Hund02603 Selenicereus undatus HOM05D005220 ORTHO05D006082 9.3e-06 55.8 254 22.8


User provided reference genes

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