Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu026398.1 Olea europaea HOM05D007542 ORTHO05D009519 1.5e-101 372.9 194 100.0
Oeu008012.1 Olea europaea HOM05D007542 ORTHO05D009519 4.7e-58 228.4 179 73.2
MSTRG.6947 Avicennia marina HOM05D007542 ORTHO05D009519 4.3e-43 178.7 196 54.1
Hma1.2p1_1332F.1_g276050 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 1.4e-38 163.7 200 52.0
Cc05_g14120 Coffea canephora HOM05D007542 ORTHO05D009519 3.2e-38 162.5 212 50.9
TAR643G0006 Trochodendron aralioides HOM05D007542 ORTHO05D009519 2.0e-37 159.8 203 49.8
GSVIVG01037700001 Vitis vinifera HOM05D007542 ORTHO05D009519 2.7e-37 159.5 205 49.8
Nn1g03444 Nelumbo nucifera HOM05D007542 ORTHO05D009519 1.1e-35 154.1 212 46.7
Manes.03G133100 Manihot esculenta HOM05D007542 ORTHO05D009519 5.6e-35 151.8 202 48.0
Potri.011G087000 Populus trichocarpa HOM05D007542 ORTHO05D009519 1.6e-34 150.2 205 48.3
Sabra11G0071000 Salix brachista HOM05D007542 ORTHO05D009519 1.6e-34 150.2 207 48.8
Cpa.g.sc12.265 Carica papaya HOM05D007542 ORTHO05D009519 4.7e-34 148.7 196 45.9
QL08p006891 Quercus lobata HOM05D007542 ORTHO05D009519 8.1e-34 147.9 207 46.9
COL.COLO4_09703 Corchorus olitorius HOM05D007542 ORTHO05D009519 1.4e-33 147.1 204 49.0
Ciclev10009585m.g Citrus clementina HOM05D007542 ORTHO05D009519 1.8e-33 146.7 197 48.7
Nitab4.5_0000328g0130 Nicotiana tabacum HOM05D007542 ORTHO05D009519 3.4e-32 142.5 201 48.3
Prupe.4G220300 Prunus persica HOM05D007542 ORTHO05D009519 4.4e-32 142.1 213 43.2
Dinv22244 Davidia involucrata HOM05D007542 ORTHO05D009519 5.8e-32 141.7 197 49.7
Duzib170G0581 Durio zibethinus HOM05D007542 ORTHO05D009519 7.5e-32 141.4 197 47.2
Thecc.07G031100 Theobroma cacao HOM05D007542 ORTHO05D009519 9.8e-32 141.0 197 49.2
Aqoxy1G03049 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 1.3e-31 140.6 207 44.4
CSS0027066 Camellia sinensis var. sinensis HOM05D007542 ORTHO05D009519 1.4e-30 137.1 205 44.9
Gorai.002G092100 Gossypium raimondii HOM05D007542 ORTHO05D009519 2.4e-30 136.3 204 48.0
TWI38G0725 Tripterygium wilfordii HOM05D007542 ORTHO05D009519 2.4e-30 136.3 198 45.5
Cfa020302 Carpinus fangiana HOM05D007542 ORTHO05D009519 7.1e-30 134.8 204 46.6
RcHm_v2.0_Chr5g0040991 Rosa chinensis HOM05D007542 ORTHO05D009519 1.2e-29 134.0 214 42.5
Dinv40786 Davidia involucrata HOM05D007542 ORTHO05D009519 2.1e-29 133.3 190 43.7
Gohir.D01G069700 Gossypium hirsutum HOM05D007542 ORTHO05D009519 2.1e-29 133.3 204 46.1
Eucgr.F00716 Eucalyptus grandis HOM05D007542 ORTHO05D009519 7.8e-29 131.3 215 42.8
FAN16G3720 Fragaria x ananassa HOM05D007542 ORTHO05D009519 7.8e-29 131.3 220 40.9
FAN25G0364 Fragaria x ananassa HOM05D007542 ORTHO05D009519 1.0e-28 131.0 210 41.9
FAN25G1685 Fragaria x ananassa HOM05D007542 ORTHO05D009519 1.0e-28 131.0 210 41.9
CiPaw.11G192900 Carya illinoinensis HOM05D007542 ORTHO05D009519 1.3e-28 130.6 212 46.7
FAN21G0453 Fragaria x ananassa HOM05D007542 ORTHO05D009519 1.3e-28 130.6 220 41.8
FvH4_3g23270 Fragaria vesca HOM05D007542 ORTHO05D009519 3.0e-28 129.4 220 40.9
PGSC0003DMG400014384 Solanum tuberosum HOM05D007542 ORTHO05D009519 3.0e-28 129.4 229 43.2
Nn1g07236 Nelumbo nucifera HOM05D007542 ORTHO05D009519 2.5e-27 126.3 208 42.8
MSTRG.12988 Avicennia marina HOM05D007542 ORTHO05D009519 4.3e-27 125.6 183 47.0
Prupe.4G220200 Prunus persica HOM05D007542 ORTHO05D009519 4.3e-27 125.6 211 43.1
MBI10_g09179_MAGBIO Magnolia biondii HOM05D007542 ORTHO05D009519 7.3e-27 124.8 191 44.0
MD11G1212200 Malus domestica HOM05D007542 ORTHO05D009519 1.2e-26 124.0 210 43.8
Nitab4.5_0002826g0080 Nicotiana tabacum HOM05D007542 ORTHO05D009519 1.2e-26 124.0 202 43.6
CAN.G492.20 Capsicum annuum HOM05D007542 ORTHO05D009519 2.8e-26 122.9 219 42.9
MD03G1195800 Malus domestica HOM05D007542 ORTHO05D009519 8.1e-26 121.3 212 40.6
Migut.H01805 Erythranthe guttata HOM05D007542 ORTHO05D009519 1.4e-25 120.6 189 48.7
FAN11G1962 Fragaria x ananassa HOM05D007542 ORTHO05D009519 2.3e-25 119.8 209 40.2
Atru.chr2.3499 Acer truncatum HOM05D007542 ORTHO05D009519 3.1e-25 119.4 222 41.0
CAN.G337.69 Capsicum annuum HOM05D007542 ORTHO05D009519 5.2e-25 118.6 188 46.3
Glyma.18G092800 Glycine max HOM05D007542 ORTHO05D009519 8.9e-25 117.9 194 42.3
Rhsim06G0222000 Rhododendron simsii HOM05D007542 ORTHO05D009519 1.2e-24 117.5 200 42.0
DCAR_016720 Daucus carota HOM05D007542 ORTHO05D009519 1.5e-24 117.1 212 42.9
Lalb_Chr04g0248281 Lupinus albus HOM05D007542 ORTHO05D009519 2.0e-24 116.7 188 45.2
LjContig00272g0021523 Lotus japonicus HOM05D007542 ORTHO05D009519 2.6e-24 116.3 180 42.2
PSO541G2394 Papaver somniferum HOM05D007542 ORTHO05D009519 4.4e-24 115.5 241 40.2
Medtr5g093430 Medicago truncatula HOM05D007542 ORTHO05D009519 5.8e-24 115.2 194 43.8
Sopen07g033030 Solanum pennellii HOM05D007542 ORTHO05D009519 5.8e-24 115.2 193 44.0
Psat2g012360 Pisum sativum HOM05D007542 ORTHO05D009519 7.6e-24 114.8 189 45.0
TAR626G0917 Trochodendron aralioides HOM05D007542 ORTHO05D009519 2.2e-23 113.2 185 41.6
Lj6g0015208 Lotus japonicus HOM05D007542 ORTHO05D009519 3.8e-23 112.5 194 39.2
Ca_06340_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 4.9e-23 112.1 184 42.4
Medtr5g093440 Medicago truncatula HOM05D007542 ORTHO05D009519 4.9e-23 112.1 194 41.2
Solyc10g006150.3 Solanum lycopersicum HOM05D007542 ORTHO05D009519 4.9e-23 112.1 226 39.8
CsaV3_3G004930 Cucumis sativus L. HOM05D007542 ORTHO05D009519 6.4e-23 111.7 200 37.5
Glyma.08G319700 Glycine max HOM05D007542 ORTHO05D009519 8.4e-23 111.3 194 41.2
Phvul.006G046800 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 8.4e-23 111.3 196 42.3
MELO3C014190.2 Cucumis melo HOM05D007542 ORTHO05D009519 1.1e-22 110.9 198 38.4
Peaxi162Scf00235g00059 Petunia axillaris HOM05D007542 ORTHO05D009519 2.4e-22 109.8 187 42.2
TAR624G0015 Trochodendron aralioides HOM05D007542 ORTHO05D009519 3.2e-22 109.4 191 41.9
Actinidia05075 Actinidia chinensis HOM05D007542 ORTHO05D009519 7.1e-22 108.2 182 45.6
Hma1.2p1_3935F.1_g338010 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 7.1e-22 108.2 146 48.6
TPR.G1179 Trifolium pratense HOM05D007542 ORTHO05D009519 9.2e-22 107.8 195 42.1
TPR.G17892 Trifolium pratense HOM05D007542 ORTHO05D009519 6.6e-20 101.7 188 38.3
Glyma.14G021700 Glycine max HOM05D007542 ORTHO05D009519 7.3e-19 98.2 185 35.1
PGSC0003DMG400022335 Solanum tuberosum HOM05D007542 ORTHO05D009519 7.3e-19 98.2 173 41.6
Sc16g0005830 Simmondsia chinensis HOM05D007542 ORTHO05D009519 1.4e-17 94.0 196 35.2
Sc03g0008420 Simmondsia chinensis HOM05D007542 ORTHO05D009519 6.9e-17 91.7 183 38.8
Psat2g012400 Pisum sativum HOM05D007542 ORTHO05D009519 8.9e-17 91.3 188 37.8
Phvul.008G269700 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 1.5e-16 90.5 203 36.0
Lj6g0001233 Lotus japonicus HOM05D007542 ORTHO05D009519 2.0e-16 90.1 242 32.2
arahy.Tifrunner.gnm1.ann1.ENS6UV Arachis hypogaea HOM05D007542 ORTHO05D009519 2.6e-16 89.7 203 36.0
VMungo0647G1207 Vigna mungo HOM05D007542 ORTHO05D009519 9.9e-16 87.8 204 36.3
arahy.Tifrunner.gnm1.ann1.T42YYR Arachis hypogaea HOM05D007542 ORTHO05D009519 2.2e-15 86.7 186 34.9
arahy.Tifrunner.gnm1.ann1.C8UBJW Arachis hypogaea HOM05D007542 ORTHO05D009519 6.4e-15 85.1 186 34.4
Ca_25812_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 1.1e-14 84.3 189 37.0
Lj1P878T38 Lonicera japonica HOM05D007542 ORTHO05D009519 1.4e-14 84.0 158 42.4
Medtr3g053160 Medicago truncatula HOM05D007542 ORTHO05D009519 5.4e-14 82.0 183 34.4
Sopen10g002100 Solanum pennellii HOM05D007542 ORTHO05D009519 5.4e-14 82.0 130 43.8
EL10Ac4g07752 Beta vulgaris HOM05D007542 ORTHO05D009519 7.8e-13 78.2 201 33.3
Gohir.A01G083201 Gossypium hirsutum HOM05D007542 ORTHO05D009519 2.3e-12 76.6 105 45.7
Nitab4.5_0004829g0120 Nicotiana tabacum HOM05D007542 ORTHO05D009519 1.1e-11 74.3 169 36.1
Aqoxy1G03452 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 9.6e-11 71.2 148 34.5
VMungo0540G1120 Vigna mungo HOM05D007542 ORTHO05D009519 1.3e-10 70.9 201 32.3
Manes.15G067900 Manihot esculenta HOM05D007542 ORTHO05D009519 8.1e-10 68.2 145 40.0
CDE08G0529 Ceratophyllum demersum HOM05D007542 ORTHO05D009519 4.5e-08 62.4 140 30.0
Os01g0532300 Oryza sativa ssp. japonica HOM05D007542 ORTHO05D009519 2.2e-07 60.1 36 72.2
SEGI_03822 Sequoiadendron giganteum HOM05D007542 ORTHO05D009519 2.4e-06 56.6 100 40.0


User provided reference genes

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