Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu026313.1 Olea europaea HOM05D003821 ORTHO05D004449 9.1e-41 169.9 89 100.0
Oeu027727.1 Olea europaea HOM05D003821 ORTHO05D004449 1.2e-32 142.9 87 85.1
MSTRG.3917 Avicennia marina HOM05D003821 ORTHO05D004449 8.5e-31 136.7 87 81.6
MSTRG.24794 Avicennia marina HOM05D003821 ORTHO05D004449 2.7e-29 131.7 86 80.2
Migut.G00164 Erythranthe guttata HOM05D003821 ORTHO05D004449 1.4e-28 129.4 87 78.2
Hma1.2p1_0078F.1_g040550 Hydrangea macrophylla HOM05D003821 ORTHO05D004449 1.4e-28 129.4 86 77.9
Manes.15G012400 Manihot esculenta HOM05D003821 ORTHO05D004449 3.0e-28 128.3 88 77.3
Rhsim02G0009100 Rhododendron simsii HOM05D003821 ORTHO05D004449 4.0e-28 127.9 103 68.0
Nitab4.5_0000191g0110 Nicotiana tabacum HOM05D003821 ORTHO05D004449 2.6e-27 125.2 115 63.5
TWI09G0102 Tripterygium wilfordii HOM05D003821 ORTHO05D004449 3.3e-27 124.8 86 76.7
TWI53G1984 Tripterygium wilfordii HOM05D003821 ORTHO05D004449 3.7e-26 121.3 86 74.4
Psat3g022560 Pisum sativum HOM05D003821 ORTHO05D004449 7.0e-25 117.1 89 71.9
CiPaw.07G106400 Carya illinoinensis HOM05D003821 ORTHO05D004449 9.1e-25 116.7 80 76.2
CiPaw.08G097300 Carya illinoinensis HOM05D003821 ORTHO05D004449 1.2e-24 116.3 80 75.0
AL7G39490 Arabidopsis lyrata HOM05D003821 ORTHO05D004449 2.0e-24 115.5 89 70.8
CARHR290310 Cardamine hirsuta HOM05D003821 ORTHO05D004449 2.7e-24 115.2 89 71.9
AT4G15802 Arabidopsis thaliana HOM05D003821 ORTHO05D004449 5.9e-24 114.0 89 69.7
Ca_10352_v3 Cicer arietinum L. HOM05D003821 ORTHO05D004449 7.7e-24 113.6 88 65.9
Carub.0007s2585 Capsella rubella HOM05D003821 ORTHO05D004449 2.9e-23 111.7 83 72.3
Phvul.009G247900 Phaseolus vulgaris HOM05D003821 ORTHO05D004449 3.2e-22 108.2 72 77.8
Sed0001615 Sechium edule HOM05D003821 ORTHO05D004449 3.2e-22 108.2 101 61.4
Thecc.04G284600 Theobroma cacao HOM05D003821 ORTHO05D004449 4.2e-22 107.8 83 68.7
QL10p053326 Quercus lobata HOM05D003821 ORTHO05D004449 5.5e-22 107.5 97 62.9
QL10p054532 Quercus lobata HOM05D003821 ORTHO05D004449 5.5e-22 107.5 97 62.9
vmacro08148 Vaccinium macrocarpon HOM05D003821 ORTHO05D004449 2.1e-21 105.5 152 45.4
Haze_04896 Corylus avellana HOM05D003821 ORTHO05D004449 2.7e-21 105.1 90 66.7
Atru.chr4.2835 Acer truncatum HOM05D003821 ORTHO05D004449 3.6e-21 104.8 136 49.3
CAN.G185.14 Capsicum annuum HOM05D003821 ORTHO05D004449 3.6e-21 104.8 88 64.8
SGA_v2.0_scaffold147G36288 Striga asiatica HOM05D003821 ORTHO05D004449 6.1e-21 104.0 87 67.8
Nitab4.5_0000570g0120 Nicotiana tabacum HOM05D003821 ORTHO05D004449 8.0e-21 103.6 88 67.0
PGSC0003DMG400022856 Solanum tuberosum HOM05D003821 ORTHO05D004449 1.0e-20 103.2 117 55.6
TPR.G9594 Trifolium pratense HOM05D003821 ORTHO05D004449 1.4e-20 102.8 116 55.2
Nn4g25849 Nelumbo nucifera HOM05D003821 ORTHO05D004449 3.0e-20 101.7 86 66.3
SGA_v2.0_scaffold91G27999 Striga asiatica HOM05D003821 ORTHO05D004449 4.0e-20 101.3 112 55.4
Nitab4.5_0004438g0100 Nicotiana tabacum HOM05D003821 ORTHO05D004449 1.5e-19 99.4 97 60.8
BraA08t33190Z Brassica rapa HOM05D003821 ORTHO05D004449 3.4e-19 98.2 107 57.9
Actinidia32231 Actinidia chinensis HOM05D003821 ORTHO05D004449 7.5e-19 97.1 89 64.0
Os06g0274000 Oryza sativa ssp. japonica HOM05D003821 ORTHO05D004449 9.8e-19 96.7 64 78.1
Medtr1g088760 Medicago truncatula HOM05D003821 ORTHO05D004449 2.2e-18 95.5 116 48.3
BcaB04g18333 Brassica carinata HOM05D003821 ORTHO05D004449 2.8e-18 95.1 93 61.3
BraA01t02079Z Brassica rapa HOM05D000802 ORTHO05D013138 2.8e-18 95.1 105 59.0
CANSAT78G0465 Cannabis sativa HOM05D003821 ORTHO05D004449 2.8e-18 95.1 83 65.1
Gorai.004G142200 Gossypium raimondii HOM05D003821 ORTHO05D004449 2.8e-18 95.1 128 47.7
RcHm_v2.0_Chr6g0293541 Rosa chinensis HOM05D003821 ORTHO05D004449 2.8e-18 95.1 109 51.4
FvH4_4g18020 Fragaria vesca HOM05D003821 ORTHO05D004449 3.7e-18 94.7 87 60.9
TPR.G33980 Trifolium pratense HOM05D003821 ORTHO05D004449 3.7e-18 94.7 98 55.1
CSS0027872 Camellia sinensis var. sinensis HOM05D003821 ORTHO05D004449 4.8e-18 94.4 101 56.4
SGA_v2.0_scaffold428G51522 Striga asiatica HOM05D003821 ORTHO05D004449 4.8e-18 94.4 86 61.6
Ciclev10007067m.g Citrus clementina HOM05D003821 ORTHO05D004449 6.3e-18 94.0 129 46.5
TWI79G0264 Tripterygium wilfordii HOM05D003821 ORTHO05D004449 8.3e-18 93.6 80 63.8
FAN12G1096 Fragaria x ananassa HOM05D003821 ORTHO05D004449 1.4e-17 92.8 87 62.1
vmacro15236 Vaccinium macrocarpon HOM05D003821 ORTHO05D004449 1.4e-17 92.8 110 52.7
Nitab4.5_0003546g0070 Nicotiana tabacum HOM05D003821 ORTHO05D004449 2.4e-17 92.0 108 51.9
Gohir.D08G138600 Gossypium hirsutum HOM05D003821 ORTHO05D004449 3.1e-17 91.7 88 59.1
BolC7t45268H Brassica oleracea HOM05D003821 ORTHO05D004449 4.1e-17 91.3 87 60.9
SalBow2G1159 Salvia bowleyana HOM05D003821 ORTHO05D004449 4.1e-17 91.3 102 59.8
arahy.Tifrunner.gnm1.ann1.UD53LE Arachis hypogaea HOM05D003821 ORTHO05D004449 5.4e-17 90.9 70 72.9
BraA03t14035Z Brassica rapa HOM05D003821 ORTHO05D004449 5.4e-17 90.9 86 61.6
COL.COLO4_13871 Corchorus olitorius HOM05D003821 ORTHO05D004449 5.4e-17 90.9 94 55.3
Haze_01204 Corylus avellana HOM05D003821 ORTHO05D004449 1.2e-16 89.7 105 52.4
Peaxi162Scf00048g00209 Petunia axillaris HOM05D003821 ORTHO05D004449 2.7e-16 88.6 81 64.2
Zm00001eb380410 Zea mays HOM05D003821 ORTHO05D004449 2.7e-16 88.6 74 67.6
arahy.Tifrunner.gnm1.ann1.LH51N9 Arachis hypogaea HOM05D003821 ORTHO05D004449 2.3e-15 85.5 81 61.7
AUR62008616 Chenopodium quinoa HOM05D003821 ORTHO05D004449 2.3e-15 85.5 88 54.5
THA.LOC104820264 Tarenaya hassleriana HOM05D003821 ORTHO05D004449 2.9e-15 85.1 89 56.2
EL10Ac7g17441 Beta vulgaris HOM05D003821 ORTHO05D004449 5.0e-15 84.3 124 45.2
AUR62033168 Chenopodium quinoa HOM05D003821 ORTHO05D004449 5.0e-15 84.3 88 53.4
DCAR_013986 Daucus carota HOM05D003821 ORTHO05D004449 6.6e-15 84.0 101 53.5
ATR0580G132 Amborella trichopoda HOM05D003821 ORTHO05D004449 1.1e-14 83.2 95 53.7
Rhsim04G0221500 Rhododendron simsii HOM05D003821 ORTHO05D004449 1.5e-14 82.8 144 41.7
CAN.G484.32 Capsicum annuum HOM05D003821 ORTHO05D004449 1.9e-14 82.4 132 48.5
FAN07G0841 Fragaria x ananassa HOM05D003821 ORTHO05D004449 1.9e-14 82.4 88 55.7
FAN15G2810 Fragaria x ananassa HOM05D003821 ORTHO05D004449 2.5e-14 82.0 81 59.3
FAN24G2279 Fragaria x ananassa HOM05D003821 ORTHO05D004449 2.5e-14 82.0 81 59.3
FAN27G2508 Fragaria x ananassa HOM05D003821 ORTHO05D004449 2.5e-14 82.0 81 58.0
Gohir.A08G117600 Gossypium hirsutum HOM05D003821 ORTHO05D004449 2.5e-14 82.0 88 54.5
A03p49340 Brassica napus HOM05D003821 ORTHO05D004449 3.3e-14 81.6 87 56.3
ClCG09G006050 Citrullus lanatus HOM05D003821 ORTHO05D004449 7.2e-14 80.5 80 58.8
FvH4_2g25350 Fragaria vesca HOM05D003821 ORTHO05D004449 7.2e-14 80.5 80 55.0
Prupe.1G136900 Prunus persica HOM05D003821 ORTHO05D004449 7.2e-14 80.5 88 53.4
Cpa.g.sc9.208 Carica papaya HOM05D003821 ORTHO05D004449 9.5e-14 80.1 87 57.5
FAN17G0959 Fragaria x ananassa HOM05D003821 ORTHO05D004449 9.5e-14 80.1 83 59.0
Migut.N00088 Erythranthe guttata HOM05D003821 ORTHO05D004449 1.6e-13 79.3 87 54.0
VMungo1309G1076 Vigna mungo HOM05D003821 ORTHO05D004449 1.6e-13 79.3 76 59.2
unitig_748.g8733 Utricularia gibba HOM05D003821 ORTHO05D004449 2.1e-13 79.0 85 55.3
A01p21700 Brassica napus HOM05D000802 ORTHO05D013138 2.8e-13 78.6 89 58.4
DCAR_002813 Daucus carota HOM05D003821 ORTHO05D004449 2.8e-13 78.6 90 57.8
Gorai.007G237400 Gossypium raimondii HOM05D003821 ORTHO05D004449 3.6e-13 78.2 83 55.4
FAN20G2567 Fragaria x ananassa HOM05D000897 ORTHO05D000716 4.7e-13 77.8 80 57.5
Gohir.A10G164000 Gossypium hirsutum HOM05D003821 ORTHO05D004449 6.1e-13 77.4 64 65.6
Gohir.D11G223400 Gossypium hirsutum HOM05D003821 ORTHO05D004449 1.4e-12 76.3 62 64.5
BcaC06g33446 Brassica carinata HOM05D003821 ORTHO05D004449 2.3e-12 75.5 83 57.8
BcaC06g32965 Brassica carinata HOM05D003821 ORTHO05D004449 3.0e-12 75.1 83 54.2
Potri.014G131701 Populus trichocarpa HOM05D003821 ORTHO05D004449 3.0e-12 75.1 83 51.8
Ah.04g153550 Amaranthus hybridus HOM05D003821 ORTHO05D004449 4.0e-12 74.7 89 53.9
BcaC07g37933 Brassica carinata HOM05D003821 ORTHO05D004449 5.2e-12 74.3 90 54.4
BcaNung00244 Brassica carinata HOM05D000802 ORTHO05D013138 5.2e-12 74.3 89 53.9
Sc24g0003850 Simmondsia chinensis HOM05D000714 ORTHO05D000544 6.8e-12 73.9 72 61.1
Mapoly0039s0070 Marchantia polymorpha HOM05D003821 ORTHO05D004449 8.9e-12 73.6 67 58.2
PGR031G0623 Punica granatum HOM05D003821 ORTHO05D004449 1.2e-11 73.2 89 51.7
A08p11990 Brassica napus HOM05D003821 ORTHO05D004449 3.4e-11 71.6 90 50.0
BolC8t48318H Brassica oleracea HOM05D003821 ORTHO05D004449 3.4e-11 71.6 89 51.7
Potri.010G025000 Populus trichocarpa HOM05D003821 ORTHO05D004449 5.7e-11 70.9 89 48.3
Manes.05G064201 Manihot esculenta HOM05D003821 ORTHO05D004449 7.5e-11 70.5 52 71.2
CANSAT25G1361 Cannabis sativa HOM05D003821 ORTHO05D004449 9.8e-11 70.1 80 48.8
GSVIVG01017758001 Vitis vinifera HOM05D003821 ORTHO05D004449 1.7e-10 69.3 41 80.5
TAR362G0968 Trochodendron aralioides HOM05D003821 ORTHO05D004449 2.8e-10 68.6 85 50.6
Aa31LG10G6300 Aethionema arabicum HOM05D003821 ORTHO05D004449 3.7e-10 68.2 128 39.8
Medtr7g108615 Medicago truncatula HOM05D003821 ORTHO05D004449 3.7e-10 68.2 41 82.9
Sabra08G0153500 Salix brachista HOM05D003821 ORTHO05D004449 3.7e-10 68.2 129 40.3
Sabra10G0014100 Salix brachista HOM05D003821 ORTHO05D004449 3.7e-10 68.2 176 33.5
MELO3C016019.2 Cucumis melo HOM05D003821 ORTHO05D004449 6.3e-10 67.4 45 75.6
Lj5g0023739 Lotus japonicus HOM05D003821 ORTHO05D004449 6.3e-10 67.4 82 48.8
Lalb_Chr15g0078581 Lupinus albus HOM05D003821 ORTHO05D004449 8.3e-10 67.0 41 78.0
Manes.03G194900 Manihot esculenta HOM05D003821 ORTHO05D004449 1.4e-09 66.2 79 49.4
PSO832G3070 Papaver somniferum HOM05D003821 ORTHO05D004449 1.8e-09 65.9 89 47.2
Potri.008G208100 Populus trichocarpa HOM05D003821 ORTHO05D004449 1.8e-09 65.9 89 46.1
TAR365G0642 Trochodendron aralioides HOM05D003821 ORTHO05D004449 1.8e-09 65.9 88 47.7
Duzib133G0834 Durio zibethinus HOM05D003821 ORTHO05D004449 2.4e-09 65.5 87 46.0
MD11G1304500 Malus domestica HOM05D003821 ORTHO05D004449 2.4e-09 65.5 41 75.6
Ciclev10023083m.g Citrus clementina HOM05D003821 ORTHO05D004449 3.1e-09 65.1 71 53.5
THA.LOC104802574 Tarenaya hassleriana HOM05D003821 ORTHO05D004449 4.1e-09 64.7 89 46.1
C01p27060 Brassica napus HOM05D003821 ORTHO05D004449 5.4e-09 64.3 41 78.0
C07p47410 Brassica napus HOM05D003821 ORTHO05D004449 5.4e-09 64.3 116 40.5
Cc03_g01940 Coffea canephora HOM05D003821 ORTHO05D004449 5.4e-09 64.3 41 80.5
Lalb_Chr18g0047131 Lupinus albus HOM05D003821 ORTHO05D004449 5.4e-09 64.3 41 75.6
Sp7g14190 Schrenkiella parvula HOM05D003821 ORTHO05D004449 5.4e-09 64.3 41 78.0
Hund20554 Selenicereus undatus HOM05D003821 ORTHO05D004449 5.4e-09 64.3 112 39.3
Hund05412 Selenicereus undatus HOM05D003821 ORTHO05D004449 7.0e-09 63.9 41 73.2
RcHm_v2.0_Chr4g0422221 Rosa chinensis HOM05D003821 ORTHO05D004449 9.2e-09 63.5 43 76.7
Lj4g0002252 Lotus japonicus HOM05D003821 ORTHO05D004449 1.2e-08 63.2 40 75.0
Nn3g21436 Nelumbo nucifera HOM05D000763 ORTHO05D000599 1.2e-08 63.2 41 75.6
RcHm_v2.0_Chr4g0422231 Rosa chinensis HOM05D003821 ORTHO05D004449 1.2e-08 63.2 41 75.6
Manes.01G217100 Manihot esculenta HOM05D003821 ORTHO05D004449 1.6e-08 62.8 81 50.6
Thecc.01G297100 Theobroma cacao HOM05D003821 ORTHO05D004449 2.0e-08 62.4 80 47.5
Duzib138G0767 Durio zibethinus HOM05D003821 ORTHO05D004449 2.7e-08 62.0 87 43.7
GSVIVG01027975001 Vitis vinifera HOM05D003821 ORTHO05D004449 2.7e-08 62.0 41 80.5
Cre07.g329800 Chlamydomonas reinhardtii HOM05D003821 ORTHO05D004449 4.5e-08 61.2 55 56.4
Gohir.D01G051650 Gossypium hirsutum HOM05D003821 ORTHO05D004449 5.9e-08 60.8 41 75.6
Gohir.D08G087850 Gossypium hirsutum HOM05D003821 ORTHO05D004449 5.9e-08 60.8 41 75.6
Gorai.002G124200 Gossypium raimondii HOM05D003821 ORTHO05D004449 5.9e-08 60.8 41 75.6
Pp3c16_4400 Physcomitrium patens HOM05D003821 ORTHO05D004449 5.9e-08 60.8 90 48.9
PSO210G2740 Papaver somniferum HOM05D003821 ORTHO05D004449 7.8e-08 60.5 79 43.0
TWI14G0562 Tripterygium wilfordii HOM05D003821 ORTHO05D004449 1.0e-07 60.1 86 45.3
Gohir.D08G106266 Gossypium hirsutum HOM05D003821 ORTHO05D004449 1.3e-07 59.7 40 77.5
Zm00001eb098770 Zea mays HOM05D003821 ORTHO05D004449 1.3e-07 59.7 83 42.2
THA.LOC104817510 Tarenaya hassleriana HOM05D003821 ORTHO05D004449 1.7e-07 59.3 88 40.9
unitig_32.g10644 Utricularia gibba HOM05D003821 ORTHO05D004449 1.7e-07 59.3 37 73.0
Prupe.8G258100 Prunus persica HOM05D003821 ORTHO05D004449 2.3e-07 58.9 71 49.3
Aa31LG8G3720 Aethionema arabicum HOM05D003821 ORTHO05D004449 2.9e-07 58.5 73 47.9
MD03G1285000 Malus domestica HOM05D003821 ORTHO05D004449 2.9e-07 58.5 48 64.6
Peaxi162Scf00086g00435 Petunia axillaris HOM05D003821 ORTHO05D004449 2.9e-07 58.5 34 85.3
CsaV3_7G029090 Cucumis sativus L. HOM05D003821 ORTHO05D004449 3.9e-07 58.2 87 44.8
Gohir.A12G010600 Gossypium hirsutum HOM05D003821 ORTHO05D004449 6.6e-07 57.4 88 40.9
Gohir.D12G011000 Gossypium hirsutum HOM05D003821 ORTHO05D004449 6.6e-07 57.4 88 40.9
THA.LOC104821775 Tarenaya hassleriana HOM05D003821 ORTHO05D004449 6.6e-07 57.4 72 47.2
Gorai.005G060300 Gossypium raimondii HOM05D003821 ORTHO05D004449 8.6e-07 57.0 41 68.3
HanXRQChr06g0169061 Helianthus annuus HOM05D003821 ORTHO05D004449 1.1e-06 56.6 41 68.3
Psat6g166600 Pisum sativum HOM05D003821 ORTHO05D004449 1.1e-06 56.6 88 40.9
CSS0020997 Camellia sinensis var. sinensis HOM05D003821 ORTHO05D004449 1.5e-06 56.2 40 75.0
CSS0044842 Camellia sinensis var. sinensis HOM05D003821 ORTHO05D004449 1.5e-06 56.2 40 75.0
PGR004G1635 Punica granatum HOM05D003821 ORTHO05D004449 1.5e-06 56.2 71 47.9
Glyma.03G213100 Glycine max HOM05D003821 ORTHO05D004449 1.9e-06 55.8 51 52.9
Gorai.N022500 Gossypium raimondii HOM05D003821 ORTHO05D004449 1.9e-06 55.8 41 75.6
Gorai.008G011000 Gossypium raimondii HOM05D003821 ORTHO05D004449 2.5e-06 55.5 87 40.2
Medtr7g108610 Medicago truncatula HOM05D003821 ORTHO05D004449 2.5e-06 55.5 39 69.2
Hma1.2p1_0209F.1_g088610 Hydrangea macrophylla HOM05D003821 ORTHO05D004449 3.3e-06 55.1 46 63.0
Atru.chr5.1182 Acer truncatum HOM05D003821 ORTHO05D004449 4.3e-06 54.7 78 44.9
SHI29056 Sapria himalayana HOM05D000030 ORTHO05D000009 5.6e-06 54.3 80 43.8
MBI02_g32313_MAGBIO Magnolia biondii HOM05D036700 ORTHO05D048553 7.3e-06 53.9 47 63.8
Ah.08g213210 Amaranthus hybridus HOM05D003821 ORTHO05D004449 9.5e-06 53.5 171 29.2
Phvul.007G106500 Phaseolus vulgaris HOM05D003821 ORTHO05D004449 9.5e-06 53.5 89 40.4


User provided reference genes

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