Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu026230.1 Olea europaea HOM05D007363 ORTHO05D009018 4.4e-80 301.2 150 100.0
Lj1C66G14 Lonicera japonica HOM05D007363 ORTHO05D009018 1.1e-54 216.9 146 74.0
Solyc06g083880.2 Solanum lycopersicum HOM05D007363 ORTHO05D009018 3.2e-54 215.3 143 73.4
Rhsim01G0263400 Rhododendron simsii HOM05D007363 ORTHO05D009018 1.6e-53 213.0 144 74.3
Actinidia25792 Actinidia chinensis HOM05D007363 ORTHO05D009018 6.0e-53 211.1 145 73.1
PGSC0003DMG400020073 Solanum tuberosum HOM05D007363 ORTHO05D009018 1.0e-52 210.3 146 71.2
Peaxi162Scf00013g01119 Petunia axillaris HOM05D007363 ORTHO05D009018 1.3e-52 209.9 121 81.8
Sopen06g035280 Solanum pennellii HOM05D007363 ORTHO05D009018 1.3e-52 209.9 146 70.5
Cc01_g18330 Coffea canephora HOM05D007363 ORTHO05D009018 3.0e-52 208.8 123 81.3
Nitab4.5_0020962g0010 Nicotiana tabacum HOM05D007363 ORTHO05D009018 3.9e-52 208.4 148 71.6
CSS0036840 Camellia sinensis var. sinensis HOM05D007363 ORTHO05D009018 1.9e-51 206.1 141 72.3
Dinv22404 Davidia involucrata HOM05D007363 ORTHO05D009018 1.9e-51 206.1 143 71.3
SalBow6G5236 Salvia bowleyana HOM05D007363 ORTHO05D009018 4.3e-51 204.9 144 72.9
HanXRQChr10g0280941 Helianthus annuus HOM05D007363 ORTHO05D009018 1.6e-50 203.0 144 70.1
DCAR_000936 Daucus carota HOM05D007363 ORTHO05D009018 2.1e-50 202.6 146 69.2
Nn3g19660 Nelumbo nucifera HOM05D007363 ORTHO05D009018 2.1e-50 202.6 160 64.4
Hma1.2p1_0576F.1_g182050 Hydrangea macrophylla HOM05D007363 ORTHO05D009018 1.4e-49 199.9 121 76.9
Potri.002G038200 Populus trichocarpa HOM05D007363 ORTHO05D009018 1.8e-49 199.5 146 69.2
Lsat_1_v5_gn_9_8480 Lactuca sativa HOM05D007363 ORTHO05D009018 2.4e-49 199.1 141 68.8
PSO017G1673 Papaver somniferum HOM05D007363 ORTHO05D009018 2.6e-48 195.7 154 64.3
Potri.005G224600 Populus trichocarpa HOM05D007363 ORTHO05D009018 4.4e-48 194.9 146 67.8
PSO063G1687 Papaver somniferum HOM05D007363 ORTHO05D009018 1.3e-47 193.4 154 61.7
Sabra05G0173300 Salix brachista HOM05D007363 ORTHO05D009018 1.3e-47 193.4 146 67.1
ECA247G1846 Erigeron canadensis HOM05D007363 ORTHO05D009018 1.7e-47 193.0 120 74.2
Atru.chr5.1691 Acer truncatum HOM05D007363 ORTHO05D009018 3.8e-47 191.8 147 65.3
MD05G1197000 Malus domestica HOM05D007363 ORTHO05D009018 1.1e-46 190.3 147 67.3
TAR365G0665 Trochodendron aralioides HOM05D007363 ORTHO05D009018 1.1e-46 190.3 148 66.9
GSVIVG01028336001 Vitis vinifera HOM05D007363 ORTHO05D009018 2.4e-46 189.1 148 64.2
Prupe.8G223500 Prunus persica HOM05D007363 ORTHO05D009018 5.4e-46 188.0 146 66.4
CiPaw.04G186800 Carya illinoinensis HOM05D007363 ORTHO05D009018 2.7e-45 185.7 152 63.2
FAN24G0389 Fragaria x ananassa HOM05D007363 ORTHO05D009018 4.6e-45 184.9 146 64.4
FAN20G0360 Fragaria x ananassa HOM05D007363 ORTHO05D009018 6.0e-45 184.5 125 71.2
Cfa002427 Carpinus fangiana HOM05D007363 ORTHO05D009018 7.8e-45 184.1 141 68.1
FvH4_2g21450 Fragaria vesca HOM05D007363 ORTHO05D009018 1.3e-44 183.3 140 65.7
Manes.12G032500 Manihot esculenta HOM05D007363 ORTHO05D009018 1.7e-44 183.0 146 65.8
QL09p038775 Quercus lobata HOM05D007363 ORTHO05D009018 3.0e-44 182.2 156 61.5
TWI18G0555 Tripterygium wilfordii HOM05D007363 ORTHO05D009018 3.0e-44 182.2 150 62.0
ATR0736G122 Amborella trichopoda HOM05D007363 ORTHO05D009018 3.9e-44 181.8 144 63.2
Ciclev10024115m.g Citrus clementina HOM05D007363 ORTHO05D009018 6.6e-44 181.0 124 71.8
VMungo1383G1059 Vigna mungo HOM05D007363 ORTHO05D009018 1.9e-43 179.5 142 62.0
Aqoxy5G00227 Aquilegia oxysepala HOM05D007363 ORTHO05D009018 2.5e-43 179.1 155 58.1
Migut.N02204 Erythranthe guttata HOM05D007363 ORTHO05D009018 2.5e-43 179.1 165 61.2
arahy.Tifrunner.gnm1.ann1.1CEJ34 Arachis hypogaea HOM05D007363 ORTHO05D009018 4.3e-43 178.3 143 62.2
Lj1g0022592 Lotus japonicus HOM05D007363 ORTHO05D009018 5.6e-43 177.9 153 58.8
RcHm_v2.0_Chr6g0288091 Rosa chinensis HOM05D007363 ORTHO05D009018 5.6e-43 177.9 143 63.6
unitig_0.g703 Utricularia gibba HOM05D007363 ORTHO05D009018 7.3e-43 177.6 144 62.5
arahy.Tifrunner.gnm1.ann1.F24DAH Arachis hypogaea HOM05D007363 ORTHO05D009018 9.6e-43 177.2 122 68.9
SGA_v2.0_scaffold510G52612 Striga asiatica HOM05D007363 ORTHO05D009018 9.6e-43 177.2 146 59.6
Phvul.001G161200 Phaseolus vulgaris HOM05D007363 ORTHO05D009018 2.1e-42 176.0 144 60.4
FAN15G0604 Fragaria x ananassa HOM05D007363 ORTHO05D009018 2.8e-42 175.6 135 65.9
AUR62011874 Chenopodium quinoa HOM05D005758 ORTHO05D007218 3.6e-42 175.3 133 64.7
AUR62024717 Chenopodium quinoa HOM05D007363 ORTHO05D009018 3.6e-42 175.3 125 67.2
CANSAT01G1440 Cannabis sativa HOM05D007363 ORTHO05D009018 8.1e-42 174.1 142 64.1
Lalb_Chr01g0019641 Lupinus albus HOM05D007363 ORTHO05D009018 8.1e-42 174.1 143 60.8
Glyma.03G163300 Glycine max HOM05D007363 ORTHO05D009018 4.0e-41 171.8 142 59.9
Thecc.01G258000 Theobroma cacao HOM05D007363 ORTHO05D009018 6.9e-41 171.0 121 67.8
Ca_08677_v3 Cicer arietinum L. HOM05D001001 ORTHO05D000808 2.0e-40 169.5 132 64.4
Ca_08711_v3 Cicer arietinum L. HOM05D001001 ORTHO05D000808 2.0e-40 169.5 132 64.4
Medtr7g096960 Medicago truncatula HOM05D007363 ORTHO05D009018 2.0e-40 169.5 144 57.6
Ah.02g111990 Amaranthus hybridus HOM05D007363 ORTHO05D009018 2.6e-40 169.1 125 68.0
Psat3g056960 Pisum sativum HOM05D007363 ORTHO05D009018 2.6e-40 169.1 141 58.2
Duzib138G0908 Durio zibethinus HOM05D007363 ORTHO05D009018 5.8e-40 167.9 147 59.2
ClCG09G007810 Citrullus lanatus HOM05D007363 ORTHO05D009018 7.6e-40 167.5 146 55.5
Gohir.A07G148800 Gossypium hirsutum HOM05D007363 ORTHO05D009018 7.6e-40 167.5 150 59.3
COL.COLO4_05892 Corchorus olitorius HOM05D007363 ORTHO05D009018 9.9e-40 167.2 150 58.0
EL10Ac5g10397 Beta vulgaris HOM05D007363 ORTHO05D009018 1.3e-39 166.8 149 59.1
Gorai.001G177500 Gossypium raimondii HOM05D007363 ORTHO05D009018 1.7e-39 166.4 120 67.5
Duzib133G1388 Durio zibethinus HOM05D007363 ORTHO05D009018 2.2e-39 166.0 150 58.7
Gohir.D07G155100 Gossypium hirsutum HOM05D007363 ORTHO05D009018 3.8e-39 165.2 120 67.5
CARHR111060 Cardamine hirsuta HOM05D007363 ORTHO05D009018 1.4e-38 163.3 142 57.0
CsaV3_7G027320 Cucumis sativus L. HOM05D007363 ORTHO05D009018 1.9e-38 162.9 147 55.1
AT2G20515 Arabidopsis thaliana HOM05D007363 ORTHO05D009018 4.2e-38 161.8 149 57.7
MELO3C015729.2 Cucumis melo HOM05D007363 ORTHO05D009018 5.4e-38 161.4 144 57.6
BcaB01g04373 Brassica carinata HOM05D007363 ORTHO05D009018 1.6e-37 159.8 150 56.0
Carub.0003s3497 Capsella rubella HOM05D007363 ORTHO05D009018 1.6e-37 159.8 149 55.7
Thhalv10002113m.g Eutrema salsugineum HOM05D007363 ORTHO05D009018 2.7e-37 159.1 149 57.7
Sp3g33740 Schrenkiella parvula HOM05D007363 ORTHO05D009018 2.7e-37 159.1 145 57.9
THA.LOC104814517 Tarenaya hassleriana HOM05D007363 ORTHO05D009018 2.7e-37 159.1 143 55.9
BraA03t10685Z Brassica rapa HOM05D007363 ORTHO05D009018 4.6e-37 158.3 150 56.0
A03p13820 Brassica napus HOM05D007363 ORTHO05D009018 6.0e-37 157.9 149 57.0
AL3G53530 Arabidopsis lyrata HOM05D007363 ORTHO05D009018 1.0e-36 157.1 149 55.7
BcaC01g06392 Brassica carinata HOM05D007363 ORTHO05D009018 1.0e-36 157.1 149 56.4
C03p16260 Brassica napus HOM05D007363 ORTHO05D009018 1.0e-36 157.1 149 56.4
BolC3t14048H Brassica oleracea HOM05D007363 ORTHO05D009018 1.0e-36 157.1 149 56.4
BcaB08g34913 Brassica carinata HOM05D007363 ORTHO05D009018 1.8e-36 156.4 149 56.4
Cpa.g.sc165.9 Carica papaya HOM05D007363 ORTHO05D009018 1.8e-36 156.4 125 59.2
Sed0008485 Sechium edule HOM05D007363 ORTHO05D009018 1.5e-35 153.3 127 57.5
Zm00001eb077670 Zea mays HOM05D007363 ORTHO05D009018 1.5e-35 153.3 122 59.0
Os04g0517000 Oryza sativa ssp. japonica HOM05D007363 ORTHO05D009018 4.3e-35 151.8 123 57.7
Haze_24634 Corylus avellana HOM05D007363 ORTHO05D009018 5.6e-35 151.4 116 63.8
Eucgr.K03259 Eucalyptus grandis HOM05D007363 ORTHO05D009018 9.6e-35 150.6 150 54.0
Eucgr.L02952 Eucalyptus grandis HOM05D007363 ORTHO05D009018 9.6e-35 150.6 150 54.0
PGR042G3583 Punica granatum HOM05D007363 ORTHO05D009018 1.6e-34 149.8 147 59.2
Aa31LG8G17460 Aethionema arabicum HOM05D004208 ORTHO05D005156 2.1e-34 149.4 152 55.3
Hma1.2p1_0576F.1_g182040 Hydrangea macrophylla HOM05D007363 ORTHO05D009018 2.8e-34 149.1 85 81.2
MBI10_g08049_MAGBIO Magnolia biondii HOM05D007363 ORTHO05D009018 6.2e-34 147.9 108 63.0
Hund02916 Selenicereus undatus HOM05D004102 ORTHO05D005307 6.9e-33 144.4 105 65.7
Lj2P297T63 Lonicera japonica HOM05D007363 ORTHO05D009018 1.8e-28 129.8 95 68.4
SEGI_29869 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 1.9e-27 126.3 159 44.7
Lsat_1_v5_gn_3_73760 Lactuca sativa HOM05D007363 ORTHO05D009018 5.8e-24 114.8 107 52.3
FAN27G1204 Fragaria x ananassa HOM05D007363 ORTHO05D009018 6.5e-23 111.3 83 67.5
Lj5P53T14 Lonicera japonica HOM05D007363 ORTHO05D009018 2.4e-17 92.8 77 63.6
SEGI_36288 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 1.9e-14 83.2 111 40.5
Lj6P94T4 Lonicera japonica HOM05D007363 ORTHO05D009018 3.2e-14 82.4 58 70.7
Lj6P297T4 Lonicera japonica HOM05D007363 ORTHO05D009018 4.2e-14 82.0 58 72.4
BcaC07g41210 Brassica carinata HOM05D004208 ORTHO05D005156 2.3e-12 76.3 66 54.5
Mapoly0037s0134 Marchantia polymorpha HOM05D007363 ORTHO05D009018 3.9e-12 75.5 108 40.7
SMO367G0707 Selaginella moellendorffii HOM05D007363 ORTHO05D009018 4.8e-10 68.6 106 36.8
Mapoly0022s0141 Marchantia polymorpha HOM05D021038 ORTHO05D009018 1.8e-09 66.6 111 37.8
Pp3c4_16960 Physcomitrium patens HOM05D003750 ORTHO05D004337 5.9e-08 61.6 112 29.5
Pp3c7_26210 Physcomitrium patens HOM05D021038 ORTHO05D009018 6.5e-07 58.2 107 34.6
Pp3c1_6510 Physcomitrium patens HOM05D021038 ORTHO05D009018 1.4e-06 57.0 107 33.6
unitig_62.g23108 Utricularia gibba HOM05D003750 ORTHO05D004337 1.4e-06 57.0 104 33.7


User provided reference genes

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