Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu026180.1 Olea europaea HOM05D002744 ORTHO05D008989 5.1e-70 267.7 141 100.0
GSVIVG01032723001 Vitis vinifera HOM05D002744 ORTHO05D008989 1.3e-57 226.5 137 83.2
CiPaw.02G197300 Carya illinoinensis HOM05D002744 ORTHO05D008989 1.9e-56 222.6 137 81.0
Dinv21809 Davidia involucrata HOM05D002744 ORTHO05D008989 7.1e-56 220.7 137 81.8
Hma1.2p1_1240F.1_g269640 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 7.1e-56 220.7 137 81.0
Ciclev10032836m.g Citrus clementina HOM05D002744 ORTHO05D008989 1.2e-55 219.9 137 81.0
Nn2g11068 Nelumbo nucifera HOM05D002744 ORTHO05D008989 6.0e-55 217.6 138 81.2
QL08p064284 Quercus lobata HOM05D002744 ORTHO05D008989 1.3e-54 216.5 137 81.0
Rhsim09G0182800 Rhododendron simsii HOM05D002744 ORTHO05D008989 1.8e-54 216.1 138 79.7
Thecc.10G007100 Theobroma cacao HOM05D002744 ORTHO05D008989 2.3e-54 215.7 137 79.6
CsaV3_5G010720 Cucumis sativus L. HOM05D002744 ORTHO05D008989 3.9e-54 214.9 137 78.8
DCAR_011891 Daucus carota HOM05D002744 ORTHO05D008989 6.7e-54 214.2 138 78.3
Peaxi162Scf00284g00123 Petunia axillaris HOM05D002744 ORTHO05D008989 8.7e-54 213.8 137 78.1
PGR142G3983 Punica granatum HOM05D002744 ORTHO05D008989 8.7e-54 213.8 136 79.4
Gohir.A05G332500 Gossypium hirsutum HOM05D002744 ORTHO05D008989 1.9e-53 212.6 137 78.1
Gohir.D04G071200 Gossypium hirsutum HOM05D002744 ORTHO05D008989 1.9e-53 212.6 137 78.1
Duzib114G0765 Durio zibethinus HOM05D002744 ORTHO05D008989 2.5e-53 212.2 137 78.1
Sed0024728 Sechium edule HOM05D002744 ORTHO05D008989 2.5e-53 212.2 137 78.1
CSS0017108 Camellia sinensis var. sinensis HOM05D002744 ORTHO05D006546 4.3e-53 211.5 136 80.1
Lju41C22T0 Lonicera japonica HOM05D002744 ORTHO05D008989 4.3e-53 211.5 137 81.8
Nitab4.5_0000263g0100 Nicotiana tabacum HOM05D002744 ORTHO05D008989 5.6e-53 211.1 137 78.8
Nitab4.5_0000928g0050 Nicotiana tabacum HOM05D002744 ORTHO05D008989 5.6e-53 211.1 137 78.1
Cc02_g05720 Coffea canephora HOM05D002744 ORTHO05D008989 7.4e-53 210.7 136 79.4
Cpa.g.sc19.99 Carica papaya HOM05D002744 ORTHO05D008989 9.6e-53 210.3 137 75.9
Lj8C58T1 Lonicera japonica HOM05D002744 ORTHO05D008989 1.3e-52 209.9 137 81.0
MD01G1161400 Malus domestica HOM05D002744 ORTHO05D008989 1.3e-52 209.9 137 78.8
Haze_17321 Corylus avellana HOM05D002744 ORTHO05D008989 2.1e-52 209.1 137 78.1
MD07G1229300 Malus domestica HOM05D002744 ORTHO05D008989 2.1e-52 209.1 137 78.1
FAN03G1008 Fragaria x ananassa HOM05D002744 ORTHO05D006546 6.2e-52 207.6 137 75.9
FAN10G0428 Fragaria x ananassa HOM05D002744 ORTHO05D006546 6.2e-52 207.6 137 75.9
COL.COLO4_25825 Corchorus olitorius HOM05D002744 ORTHO05D006546 8.1e-52 207.2 137 75.2
FvH4_7g25501 Fragaria vesca HOM05D002744 ORTHO05D008989 8.1e-52 207.2 137 75.9
RcHm_v2.0_Chr1g0371481 Rosa chinensis HOM05D002744 ORTHO05D008989 8.1e-52 207.2 137 78.1
Actinidia00986 Actinidia chinensis HOM05D002744 ORTHO05D008989 1.1e-51 206.8 139 77.0
MSTRG.12212 Avicennia marina HOM05D002744 ORTHO05D008989 1.1e-51 206.8 137 75.9
BcaB08g34630 Brassica carinata HOM05D002744 ORTHO05D008989 1.1e-51 206.8 140 72.9
FAN06G0491 Fragaria x ananassa HOM05D002744 ORTHO05D006546 1.8e-51 206.1 137 75.2
Gorai.012G080100 Gossypium raimondii HOM05D002744 ORTHO05D008989 5.3e-51 204.5 147 72.8
Atru.BG.256.p Acer truncatum HOM05D002744 ORTHO05D008989 1.5e-50 203.0 137 76.6
Sp5g06290 Schrenkiella parvula HOM05D002744 ORTHO05D008989 2.0e-50 202.6 140 70.7
Carub.0005s2299 Capsella rubella HOM05D002744 ORTHO05D008989 2.6e-50 202.2 133 73.7
Eucgr.G03110 Eucalyptus grandis HOM05D002744 ORTHO05D008989 2.6e-50 202.2 137 75.9
HanXRQChr17g0560791 Helianthus annuus HOM05D002744 ORTHO05D008989 2.6e-50 202.2 139 72.7
AL5G37530 Arabidopsis lyrata HOM05D002744 ORTHO05D008989 3.4e-50 201.8 136 72.1
Thhalv10006252m.g Eutrema salsugineum HOM05D002744 ORTHO05D008989 3.4e-50 201.8 140 70.7
CARHR166360 Cardamine hirsuta HOM05D002744 ORTHO05D008989 9.9e-50 200.3 133 72.9
EL10Ac2g04293 Beta vulgaris HOM05D002744 ORTHO05D008989 1.3e-49 199.9 137 72.3
Sopen02g021690 Solanum pennellii HOM05D002744 ORTHO05D008989 1.3e-49 199.9 137 73.7
THA.LOC104824346 Tarenaya hassleriana HOM05D002744 ORTHO05D008989 1.3e-49 199.9 137 70.8
AUR62012334 Chenopodium quinoa HOM05D002744 ORTHO05D008989 1.7e-49 199.5 137 73.0
Migut.A01076 Erythranthe guttata HOM05D002744 ORTHO05D008989 2.2e-49 199.1 137 72.3
Potri.008G075600 Populus trichocarpa HOM05D002744 ORTHO05D008989 2.2e-49 199.1 139 72.7
TWI38G2197 Tripterygium wilfordii HOM05D002744 ORTHO05D008989 2.2e-49 199.1 137 73.0
AUR62022976 Chenopodium quinoa HOM05D002744 ORTHO05D008989 2.9e-49 198.7 137 73.0
Lsat_1_v5_gn_8_13401 Lactuca sativa HOM05D002744 ORTHO05D008989 2.9e-49 198.7 137 75.2
ECA233G4001 Erigeron canadensis HOM05D002744 ORTHO05D008989 4.9e-49 198.0 139 74.1
CANSAT56G2966 Cannabis sativa HOM05D002744 ORTHO05D008989 6.4e-49 197.6 139 72.7
vmacro09984 Vaccinium macrocarpon HOM05D002744 ORTHO05D008989 6.4e-49 197.6 172 63.4
BcaB01g00016 Brassica carinata HOM05D002744 ORTHO05D008989 1.1e-48 196.8 155 65.8
Glyma.11G234700 Glycine max HOM05D002744 ORTHO05D008989 1.1e-48 196.8 137 72.3
Glyma.18G022300 Glycine max HOM05D002744 ORTHO05D008989 1.4e-48 196.4 137 72.3
Manes.10G008400 Manihot esculenta HOM05D002744 ORTHO05D008989 1.9e-48 196.1 137 70.8
Sabra08G0056200 Salix brachista HOM05D002744 ORTHO05D008989 1.9e-48 196.1 139 71.2
PSO017G6389 Papaver somniferum HOM05D002744 ORTHO05D008989 2.4e-48 195.7 139 67.6
A09p49190 Brassica napus HOM05D002744 ORTHO05D008989 3.2e-48 195.3 141 69.5
BraA09t40372Z Brassica rapa HOM05D002744 ORTHO05D008989 4.2e-48 194.9 149 67.1
Hund13513 Selenicereus undatus HOM05D002744 ORTHO05D008989 5.5e-48 194.5 137 73.0
Lj6g0011522 Lotus japonicus HOM05D002744 ORTHO05D008989 9.3e-48 193.7 139 69.1
PSO170G0776 Papaver somniferum HOM05D002744 ORTHO05D008989 9.3e-48 193.7 139 66.9
arahy.Tifrunner.gnm1.ann1.HIE7A8 Arachis hypogaea HOM05D002744 ORTHO05D008989 2.1e-47 192.6 137 68.6
AT3G56210 Arabidopsis thaliana HOM05D002744 ORTHO05D008989 2.7e-47 192.2 135 71.1
arahy.Tifrunner.gnm1.ann1.N80L0Z Arachis hypogaea HOM05D002744 ORTHO05D008989 4.6e-47 191.4 137 67.9
arahy.Tifrunner.gnm1.ann1.B5C26Y Arachis hypogaea HOM05D002744 ORTHO05D008989 6.0e-47 191.0 137 67.9
SalBow3G4547 Salvia bowleyana HOM05D002744 ORTHO05D008989 1.3e-46 189.9 137 69.3
Os03g0665800 Oryza sativa ssp. japonica HOM05D002744 ORTHO05D008989 8.7e-46 187.2 139 66.9
Phvul.001G248100 Phaseolus vulgaris HOM05D002744 ORTHO05D008989 1.5e-45 186.4 137 67.2
Prupe.2G259500 Prunus persica HOM05D002744 ORTHO05D008989 2.5e-45 185.7 119 80.7
VMungo1383G3724 Vigna mungo HOM05D002744 ORTHO05D008989 5.6e-45 184.5 137 65.7
TPR.G28641 Trifolium pratense HOM05D002744 ORTHO05D008989 7.4e-45 184.1 139 66.2
Ca_15179_v3 Cicer arietinum L. HOM05D002744 ORTHO05D008989 1.3e-44 183.3 139 65.5
FAN01G1994 Fragaria x ananassa HOM05D002744 ORTHO05D006546 1.3e-44 183.3 159 61.6
ATR0681G046 Amborella trichopoda HOM05D000826 ORTHO05D008989 1.6e-44 183.0 134 67.2
Medtr3g072120 Medicago truncatula HOM05D002744 ORTHO05D008989 2.1e-44 182.6 139 66.2
ClCG07G004800 Citrullus lanatus HOM05D002744 ORTHO05D008989 3.7e-44 181.8 116 80.2
SGA_v2.0_scaffold36G14267 Striga asiatica HOM05D002744 ORTHO05D008989 5.3e-43 177.9 137 70.1
HPP92_013966 Vanilla planifolia HOM05D002744 ORTHO05D008989 6.9e-43 177.6 139 64.7
unitig_32.g11706 Utricularia gibba HOM05D002744 ORTHO05D008989 1.5e-42 176.4 137 68.6
unitig_33.g30211 Utricularia gibba HOM05D002744 ORTHO05D008989 1.5e-42 176.4 137 68.6
PGSC0003DMG400010239 Solanum tuberosum HOM05D002744 ORTHO05D008989 3.8e-41 171.8 117 76.9
Lalb_Chr08g0231351 Lupinus albus HOM05D002744 ORTHO05D008989 8.4e-41 170.6 139 61.2
Solyc02g076790.4 Solanum lycopersicum HOM05D002744 ORTHO05D008989 1.1e-40 170.2 117 75.2
TAR623G0678 Trochodendron aralioides HOM05D002744 ORTHO05D008989 3.2e-40 168.7 113 77.0
Lj1A963T49 Lonicera japonica HOM05D002744 ORTHO05D008989 4.2e-40 168.3 96 88.5
Aa31LG10G11120 Aethionema arabicum HOM05D002744 ORTHO05D008989 1.6e-39 166.4 117 69.2
Hma1.2p1_1240F.1_g269630 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 3.9e-38 161.8 98 81.6
C08p31530 Brassica napus HOM05D002744 ORTHO05D008989 8.7e-38 160.6 147 58.5
BcaC07g39936 Brassica carinata HOM05D002744 ORTHO05D008989 1.1e-37 160.2 99 79.8
TAR369G0133 Trochodendron aralioides HOM05D000826 ORTHO05D001831 1.5e-37 159.8 99 79.8
SEGI_09795 Sequoiadendron giganteum HOM05D002744 ORTHO05D008989 1.4e-35 153.3 136 59.6
BcaB01g00017 Brassica carinata HOM05D002744 ORTHO05D008989 2.4e-35 152.5 155 56.1
Gohir.A10G240750 Gossypium hirsutum HOM05D002744 ORTHO05D008989 4.1e-35 151.8 116 69.8
Zm00001eb065520 Zea mays HOM05D002744 ORTHO05D008989 2.0e-34 149.4 96 74.0
EL10Ac2g04295 Beta vulgaris HOM05D002744 ORTHO05D008989 3.4e-34 148.7 96 76.0
BolC8t50775H Brassica oleracea HOM05D002744 ORTHO05D008989 7.6e-34 147.5 140 56.4
CDE02G4284 Ceratophyllum demersum HOM05D002744 ORTHO05D008989 1.4e-32 143.3 86 81.4
MELO3C020107.2 Cucumis melo HOM05D002744 ORTHO05D008989 6.9e-27 124.4 137 50.4
Hma1.2p1_0322F.1_g124790 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 2.0e-26 122.9 137 48.9
SEGI_38813 Sequoiadendron giganteum HOM05D002744 ORTHO05D008989 1.0e-25 120.6 96 63.5
CDE01G0559 Ceratophyllum demersum HOM05D002744 ORTHO05D008989 2.9e-25 119.0 137 51.1
Mapoly0001s0439 Marchantia polymorpha HOM05D002744 ORTHO05D008989 3.3e-21 105.5 139 43.9
Psat5g130160 Pisum sativum HOM05D002744 ORTHO05D008989 5.5e-16 88.2 55 78.2
Sc10g0002800 Simmondsia chinensis HOM05D002744 ORTHO05D008989 7.9e-15 84.3 84 57.1
Pp3c8_1670 Physcomitrium patens HOM05D002744 ORTHO05D008989 1.1e-13 80.5 87 47.1
SMO147G0318 Selaginella moellendorffii HOM05D002744 ORTHO05D008989 3.5e-10 68.9 132 35.6
CAN.G118.19 Capsicum annuum HOM05D002744 ORTHO05D008989 2.3e-06 56.2 42 64.3


User provided reference genes

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