Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu026158.1 Olea europaea HOM05D005104 ORTHO05D006614 4.1e-116 421.4 210 100.0
Oeu007957.1 Olea europaea HOM05D005104 ORTHO05D006614 2.3e-87 325.9 242 74.4
MSTRG.27791 Avicennia marina HOM05D005104 ORTHO05D006614 8.3e-69 264.2 241 64.7
Migut.N01063 Erythranthe guttata HOM05D005104 ORTHO05D006614 1.1e-63 247.3 242 59.1
Actinidia28058 Actinidia chinensis HOM05D005104 ORTHO05D006614 2.6e-62 242.7 250 56.4
SGA_v2.0_scaffold45G17311 Striga asiatica HOM05D005104 ORTHO05D006614 1.2e-59 233.8 249 56.6
CSS0037720 Camellia sinensis var. sinensis HOM05D005104 ORTHO05D006614 2.1e-59 233.0 180 70.6
Dinv24198 Davidia involucrata HOM05D005104 ORTHO05D006614 1.7e-58 229.9 255 55.3
PGR142G2776 Punica granatum HOM05D005104 ORTHO05D006614 2.3e-58 229.6 243 57.2
SalBow6G6009 Salvia bowleyana HOM05D005104 ORTHO05D006614 2.5e-57 226.1 243 55.1
SalBow6G6298 Salvia bowleyana HOM05D005104 ORTHO05D006614 2.5e-57 226.1 243 55.1
DCAR_001791 Daucus carota HOM05D005104 ORTHO05D006614 1.4e-55 220.3 248 51.6
VMungo0251G0802 Vigna mungo HOM05D005104 ORTHO05D006614 1.4e-55 220.3 249 51.8
CsaV3_7G006430 Cucumis sativus L. HOM05D005104 ORTHO05D006614 2.4e-55 219.5 253 54.2
MELO3C018651.2 Cucumis melo HOM05D005104 ORTHO05D006614 3.1e-55 219.2 248 54.4
Eucgr.I02668 Eucalyptus grandis HOM05D005104 ORTHO05D006614 3.1e-55 219.2 246 54.5
Phvul.002G208000 Phaseolus vulgaris HOM05D005104 ORTHO05D006614 4.0e-55 218.8 247 52.2
arahy.Tifrunner.gnm1.ann1.V9NXIE Arachis hypogaea HOM05D005104 ORTHO05D006614 1.5e-54 216.9 248 54.4
Manes.14G166400 Manihot esculenta HOM05D005104 ORTHO05D006614 4.4e-54 215.3 245 53.9
arahy.Tifrunner.gnm1.ann1.PH7E5N Arachis hypogaea HOM05D005104 ORTHO05D006614 5.8e-54 214.9 250 54.8
Duzib248G0158 Durio zibethinus HOM05D005104 ORTHO05D006614 5.8e-54 214.9 250 52.4
Haze_10684 Corylus avellana HOM05D005104 ORTHO05D006614 1.7e-53 213.4 245 53.9
GSVIVG01003083001 Vitis vinifera HOM05D005104 ORTHO05D006614 2.2e-53 213.0 253 54.2
Cfa005608 Carpinus fangiana HOM05D005104 ORTHO05D006614 3.8e-53 212.2 247 53.4
CANSAT11G2657 Cannabis sativa HOM05D005104 ORTHO05D006614 4.9e-53 211.8 176 67.0
CiPaw.05G036500 Carya illinoinensis HOM05D005104 ORTHO05D006614 8.4e-53 211.1 250 53.2
Hma1.2p1_0522F.1_g171600 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 8.4e-53 211.1 181 63.5
Psat7g098720 Pisum sativum HOM05D005104 ORTHO05D006614 1.1e-52 210.7 252 52.8
Rhsim05G0108500 Rhododendron simsii HOM05D005104 ORTHO05D006614 1.1e-52 210.7 180 64.4
Sopen10g017460 Solanum pennellii HOM05D005104 ORTHO05D006614 2.4e-52 209.5 241 53.5
PGSC0003DMG400017693 Solanum tuberosum HOM05D005104 ORTHO05D006614 3.2e-52 209.1 176 65.3
Lalb_Chr10g0097741 Lupinus albus HOM05D005104 ORTHO05D006614 4.2e-52 208.8 175 64.6
Thecc.02G140100 Theobroma cacao HOM05D005104 ORTHO05D006614 4.2e-52 208.8 249 52.2
Glyma.05G118400 Glycine max HOM05D005104 ORTHO05D006614 9.3e-52 207.6 246 52.8
ECA234G0341 Erigeron canadensis HOM05D005104 ORTHO05D006614 1.2e-51 207.2 175 63.4
Gohir.A04G113100 Gossypium hirsutum HOM05D005104 ORTHO05D006614 1.6e-51 206.8 251 53.4
TPR.G10460 Trifolium pratense HOM05D005104 ORTHO05D006614 1.6e-51 206.8 174 66.1
Atru.chr6.1089 Acer truncatum HOM05D005104 ORTHO05D006614 2.7e-51 206.1 175 65.7
Atru.chr6.1109 Acer truncatum HOM05D005104 ORTHO05D006614 2.7e-51 206.1 175 65.7
Solyc10g047220.2 Solanum lycopersicum HOM05D005104 ORTHO05D006614 3.5e-51 205.7 176 64.8
Ciclev10029197m.g Citrus clementina HOM05D005104 ORTHO05D006614 6.0e-51 204.9 174 64.4
HanXRQChr10g0295831 Helianthus annuus HOM05D005104 ORTHO05D006614 7.8e-51 204.5 251 51.8
Gohir.A04G112960 Gossypium hirsutum HOM05D005104 ORTHO05D006614 1.3e-50 203.8 174 64.4
Gohir.D04G154400 Gossypium hirsutum HOM05D005104 ORTHO05D006614 1.3e-50 203.8 249 52.6
Gorai.012G141700 Gossypium raimondii HOM05D005104 ORTHO05D006614 1.3e-50 203.8 249 52.6
Aqoxy6G00597 Aquilegia oxysepala HOM05D005104 ORTHO05D006614 1.7e-50 203.4 180 65.0
Lsat_1_v5_gn_5_107140 Lactuca sativa HOM05D005104 ORTHO05D006614 1.7e-50 203.4 248 51.2
Glyma.08G073500 Glycine max HOM05D005104 ORTHO05D006614 3.0e-50 202.6 251 51.4
Peaxi162Scf00003g03543 Petunia axillaris HOM05D005104 ORTHO05D006614 3.0e-50 202.6 237 55.3
Sed0008592 Sechium edule HOM05D005104 ORTHO05D006614 3.0e-50 202.6 174 63.2
TAR628G1132 Trochodendron aralioides HOM05D005104 ORTHO05D006614 3.0e-50 202.6 249 50.6
Medtr4g094252 Medicago truncatula HOM05D005104 ORTHO05D006614 8.7e-50 201.1 248 51.2
vmacro19925 Vaccinium macrocarpon HOM05D005104 ORTHO05D006614 1.1e-49 200.7 219 54.8
HPP92_006000 Vanilla planifolia HOM05D005104 ORTHO05D006614 1.1e-49 200.7 174 63.8
TWI59G0245 Tripterygium wilfordii HOM05D005104 ORTHO05D006614 1.5e-49 200.3 247 51.4
Prupe.8G062400 Prunus persica HOM05D005104 ORTHO05D006614 1.9e-49 199.9 176 64.8
ClCG09G015340 Citrullus lanatus HOM05D005104 ORTHO05D006614 3.3e-49 199.1 271 49.4
COL.COLO4_20953 Corchorus olitorius HOM05D005104 ORTHO05D006614 4.3e-49 198.7 250 50.8
Lj4g0020611 Lotus japonicus HOM05D005104 ORTHO05D006614 3.6e-48 195.7 247 49.8
FAN27G3119 Fragaria x ananassa HOM05D005104 ORTHO05D006614 6.2e-48 194.9 243 52.3
Sp2g27220 Schrenkiella parvula HOM05D005104 ORTHO05D006614 6.2e-48 194.9 242 50.4
CDE10G0587 Ceratophyllum demersum HOM05D005104 ORTHO05D006614 1.1e-47 194.1 245 49.0
FvH4_2g12710 Fragaria vesca HOM05D005104 ORTHO05D006614 1.1e-47 194.1 175 62.9
RcHm_v2.0_Chr6g0273461 Rosa chinensis HOM05D005104 ORTHO05D006614 3.1e-47 192.6 175 62.3
FAN20G1981 Fragaria x ananassa HOM05D005104 ORTHO05D006614 6.9e-47 191.4 175 62.3
Nn1g05321 Nelumbo nucifera HOM05D005104 ORTHO05D006614 1.5e-46 190.3 244 49.6
Thhalv10004872m.g Eutrema salsugineum HOM05D005104 ORTHO05D006614 2.0e-46 189.9 242 49.2
MD10G1051500 Malus domestica HOM05D005104 ORTHO05D006614 3.4e-46 189.1 177 61.6
AL8G41430 Arabidopsis lyrata HOM05D005104 ORTHO05D006614 4.5e-46 188.7 243 49.0
AT5G64160 Arabidopsis thaliana HOM05D005104 ORTHO05D006614 5.8e-46 188.3 242 48.8
Ca_18345_v3 Cicer arietinum L. HOM05D005104 ORTHO05D006614 5.8e-46 188.3 269 47.2
Cpa.g.sc42.74 Carica papaya HOM05D005104 ORTHO05D006614 1.3e-45 187.2 253 47.8
C03p62090 Brassica napus HOM05D005104 ORTHO05D006614 1.7e-45 186.8 239 49.8
BcaB07g29727 Brassica carinata HOM05D005104 ORTHO05D006614 2.9e-45 186.0 238 49.2
A06p30880 Brassica napus HOM05D005104 ORTHO05D006614 4.9e-45 185.3 239 49.8
BcaC01g02673 Brassica carinata HOM05D005104 ORTHO05D006614 6.4e-45 184.9 239 49.4
Cc02_g21630 Coffea canephora HOM05D005104 ORTHO05D006614 1.1e-44 184.1 240 52.1
BcaC02g09479 Brassica carinata HOM05D002012 ORTHO05D001992 1.9e-44 183.3 173 57.8
BolC3t18470H Brassica oleracea HOM05D005104 ORTHO05D006614 1.9e-44 183.3 239 49.0
BcaB02g09781 Brassica carinata HOM05D005104 ORTHO05D006614 2.4e-44 183.0 239 49.4
Carub.0008s2495 Capsella rubella HOM05D005104 ORTHO05D006614 5.4e-44 181.8 242 46.3
CARHR278070 Cardamine hirsuta HOM05D005104 ORTHO05D006614 1.2e-43 180.6 240 48.3
QL11p020542 Quercus lobata HOM05D005104 ORTHO05D006614 3.5e-43 179.1 194 54.6
Potri.003G023601 Populus trichocarpa HOM05D005104 ORTHO05D006614 6.0e-43 178.3 186 57.0
Lj5A240T40 Lonicera japonica HOM05D005104 ORTHO05D006614 1.3e-42 177.2 137 70.1
ATR0564G397 Amborella trichopoda HOM05D005104 ORTHO05D006614 1.1e-41 174.1 247 48.6
GSVIVG01003087001 Vitis vinifera HOM05D005104 ORTHO05D006614 1.9e-41 173.3 150 64.7
PSO781G0266 Papaver somniferum HOM05D005104 ORTHO05D006614 3.3e-41 172.6 253 47.4
Sabra01G0157800 Salix brachista HOM05D005104 ORTHO05D006614 9.6e-41 171.0 274 43.8
PSO541G4381 Papaver somniferum HOM05D005104 ORTHO05D006614 1.3e-40 170.6 253 46.2
GSVIVG01013334001 Vitis vinifera HOM05D005104 ORTHO05D006614 1.3e-40 170.6 150 64.0
C09p58340 Brassica napus HOM05D005104 ORTHO05D006614 1.6e-40 170.2 177 54.2
BolC9t58698H Brassica oleracea HOM05D005104 ORTHO05D006614 1.6e-40 170.2 177 54.2
BolC6t37855H Brassica oleracea HOM05D005104 ORTHO05D006614 3.7e-40 169.1 177 54.8
C06p26800 Brassica napus HOM05D005104 ORTHO05D006614 4.8e-40 168.7 177 54.8
C09p58390 Brassica napus HOM05D005104 ORTHO05D006614 1.1e-39 167.5 175 53.1
BcaC08g45071 Brassica carinata HOM05D005104 ORTHO05D006614 2.4e-39 166.4 177 54.2
Aa31LG1G17770 Aethionema arabicum HOM05D005104 ORTHO05D006614 5.3e-39 165.2 256 43.4
FAN24G3378 Fragaria x ananassa HOM05D005104 ORTHO05D006614 5.3e-39 165.2 135 65.9
MBI02_g08741_MAGBIO Magnolia biondii HOM05D005104 ORTHO05D006614 9.0e-39 164.5 135 65.9
Os02g0753200 Oryza sativa ssp. japonica HOM05D005104 ORTHO05D006614 4.5e-38 162.2 178 56.7
Hund06391 Selenicereus undatus HOM05D005104 ORTHO05D006614 1.7e-37 160.2 246 44.7
C02p46090 Brassica napus HOM05D005104 ORTHO05D006614 6.5e-37 158.3 177 54.2
SEGI_35517 Sequoiadendron giganteum HOM05D005104 ORTHO05D006614 4.2e-36 155.6 249 43.8
AUR62013112 Chenopodium quinoa HOM05D005104 ORTHO05D006614 9.3e-36 154.5 173 52.6
Zm00001eb194200 Zea mays HOM05D005104 ORTHO05D006614 2.7e-35 152.9 173 53.2
Hma1.2p1_0522F.1_g171590 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 3.5e-35 152.5 200 46.5
BraA03t13815Z Brassica rapa HOM05D005104 ORTHO05D006614 4.6e-35 152.1 171 49.7
AUR62010117 Chenopodium quinoa HOM05D005104 ORTHO05D006614 1.3e-34 150.6 173 50.9
Ah.01g009520 Amaranthus hybridus HOM05D005104 ORTHO05D006614 3.9e-34 149.1 242 42.6
Zm00001eb255190 Zea mays HOM05D005104 ORTHO05D006614 3.9e-34 149.1 256 41.0
GSVIVG01003093001 Vitis vinifera HOM05D005104 ORTHO05D006614 4.3e-33 145.6 121 66.1
Sc08g0003350 Simmondsia chinensis HOM05D005104 ORTHO05D006614 1.0e-29 134.4 136 55.9
SMO117G0229 Selaginella moellendorffii HOM05D005104 ORTHO05D006614 4.6e-27 125.6 199 43.7
Nitab4.5_0000078g0030 Nicotiana tabacum HOM05D005104 ORTHO05D006614 1.3e-26 124.0 192 50.5
Mapoly0096s0033 Marchantia polymorpha HOM05D005104 ORTHO05D006614 1.8e-26 123.6 253 38.3
AagrBONN_evm.TU.Sc2ySwM_117.984 Anthoceros agrestis HOM05D005104 ORTHO05D006614 1.4e-23 114.0 241 39.0
Pp3c18_21190 Physcomitrium patens HOM05D005104 ORTHO05D006614 9.0e-23 111.3 246 39.0
BolC4t25904H Brassica oleracea HOM05D005104 ORTHO05D006614 2.2e-21 106.7 73 71.2
unitig_22.g6836 Utricularia gibba HOM05D001058 ORTHO05D000911 9.4e-20 101.3 172 40.7
EL10Ac9g21466 Beta vulgaris HOM05D005104 ORTHO05D006614 2.7e-19 99.8 74 70.3
Duzib132G1169 Durio zibethinus HOM05D005104 ORTHO05D006614 4.8e-16 89.0 120 48.3
CAN.G1.36 Capsicum annuum HOM05D005104 ORTHO05D006614 1.1e-15 87.8 173 41.6
CBR_g47116 Chara braunii HOM05D005104 ORTHO05D006614 2.9e-13 79.7 165 36.4
THA.LOC104818435 Tarenaya hassleriana HOM05D005104 ORTHO05D006614 6.5e-13 78.6 171 39.2
Nitab4.5_0005015g0050 Nicotiana tabacum HOM05D005104 ORTHO05D006614 2.5e-12 76.6 150 43.3
CDE10G1356 Ceratophyllum demersum HOM05D005104 ORTHO05D006614 2.3e-10 70.1 177 35.0
Hma1.2p1_0516F.1_g170490 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 1.1e-09 67.8 130 36.9
arahy.Tifrunner.gnm1.ann1.H2YG1F Arachis hypogaea HOM05D005104 ORTHO05D006614 1.5e-09 67.4 57 59.6
A02p26040 Brassica napus HOM05D005104 ORTHO05D006614 6.3e-08 62.0 99 43.4


User provided reference genes

Program Settings