Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu026142.1 Olea europaea HOM05D007294 ORTHO05D009205 2.6e-77 292.0 147 100.0
MSTRG.22416 Avicennia marina HOM05D007294 ORTHO05D009205 5.0e-52 208.0 147 72.1
Migut.N03292 Erythranthe guttata HOM05D007294 ORTHO05D009205 7.4e-48 194.1 146 69.9
Solyc11g012940.2 Solanum lycopersicum HOM05D007294 ORTHO05D009205 3.8e-44 181.8 147 64.6
PGSC0003DMG400000918 Solanum tuberosum HOM05D007294 ORTHO05D009205 3.8e-44 181.8 147 63.9
Sopen11g007690 Solanum pennellii HOM05D007294 ORTHO05D009205 5.0e-44 181.4 147 63.9
MD08G1165800 Malus domestica HOM05D007294 ORTHO05D009205 6.5e-44 181.0 118 73.7
Dinv27334 Davidia involucrata HOM05D007294 ORTHO05D009205 4.2e-43 178.3 127 74.0
TAR628G0157 Trochodendron aralioides HOM05D007294 ORTHO05D009205 1.2e-42 176.8 122 71.3
Aqoxy6G00180 Aquilegia oxysepala HOM05D007294 ORTHO05D009205 2.7e-42 175.6 126 68.3
arahy.Tifrunner.gnm1.ann1.D4BK2C Arachis hypogaea HOM05D007294 ORTHO05D009205 4.7e-42 174.9 142 65.5
arahy.Tifrunner.gnm1.ann1.NH3KYE Arachis hypogaea HOM05D007294 ORTHO05D009205 4.7e-42 174.9 142 65.5
Potri.002G085200 Populus trichocarpa HOM05D007294 ORTHO05D009205 1.8e-41 172.9 122 72.1
RcHm_v2.0_Chr6g0295521 Rosa chinensis HOM05D007294 ORTHO05D009205 1.8e-41 172.9 114 75.4
Prupe.1G500700 Prunus persica HOM05D007294 ORTHO05D009205 2.3e-41 172.6 144 64.6
CiPaw.06G028900 Carya illinoinensis HOM05D007294 ORTHO05D009205 6.7e-41 171.0 131 64.9
TWI36G0375 Tripterygium wilfordii HOM05D007294 ORTHO05D009205 1.5e-40 169.9 142 64.1
Sabra02G0066700 Salix brachista HOM05D007294 ORTHO05D009205 2.0e-40 169.5 103 79.6
unitig_61.g26063 Utricularia gibba HOM05D007294 ORTHO05D009205 3.3e-40 168.7 107 79.4
GSVIVG01008891001 Vitis vinifera HOM05D007294 ORTHO05D009205 3.3e-40 168.7 123 69.9
Hund16850 Selenicereus undatus HOM05D007294 ORTHO05D009205 5.7e-40 167.9 108 75.9
FAN20G0043 Fragaria x ananassa HOM05D007294 ORTHO05D009205 7.4e-40 167.5 113 72.6
Hma1.2p1_0186F.1_g081585 Hydrangea macrophylla HOM05D007294 ORTHO05D009205 7.4e-40 167.5 126 69.0
PGR042G2863 Punica granatum HOM05D007294 ORTHO05D009205 9.7e-40 167.2 117 72.6
FvH4_2g26680 Fragaria vesca HOM05D007294 ORTHO05D009205 1.3e-39 166.8 113 72.6
FAN24G1632 Fragaria x ananassa HOM05D007294 ORTHO05D009205 1.3e-39 166.8 113 72.6
Lalb_Chr11g0065821 Lupinus albus HOM05D007294 ORTHO05D009205 1.3e-39 166.8 101 78.2
Ciclev10002717m.g Citrus clementina HOM05D007294 ORTHO05D009205 2.8e-39 165.6 145 60.7
Sed0003401 Sechium edule HOM05D007294 ORTHO05D009205 3.7e-39 165.2 105 75.2
CAN.G127.6 Capsicum annuum HOM05D007294 ORTHO05D009205 4.8e-39 164.9 144 63.9
Duzib093G0485 Durio zibethinus HOM05D007294 ORTHO05D009205 6.3e-39 164.5 102 75.5
CSS0025261 Camellia sinensis var. sinensis HOM05D007294 ORTHO05D009205 8.2e-39 164.1 122 70.5
Nn5g28204 Nelumbo nucifera HOM05D007294 ORTHO05D009205 8.2e-39 164.1 135 61.5
Glyma.06G111500 Glycine max HOM05D007294 ORTHO05D009205 1.1e-38 163.7 104 76.9
Gorai.009G244600 Gossypium raimondii HOM05D007294 ORTHO05D009205 1.1e-38 163.7 116 69.8
Manes.18G075800 Manihot esculenta HOM05D007294 ORTHO05D009205 1.1e-38 163.7 114 72.8
Eucgr.F03776 Eucalyptus grandis HOM05D007294 ORTHO05D009205 2.4e-38 162.5 144 62.5
Actinidia23070 Actinidia chinensis HOM05D007294 ORTHO05D009205 3.1e-38 162.2 128 69.5
Thecc.08G122800 Theobroma cacao HOM05D007294 ORTHO05D009205 3.1e-38 162.2 117 67.5
Gohir.A05G233900 Gossypium hirsutum HOM05D007294 ORTHO05D009205 5.3e-38 161.4 101 74.3
MELO3C010470.2 Cucumis melo HOM05D007294 ORTHO05D009205 7.0e-38 161.0 101 75.2
CsaV3_4G028350 Cucumis sativus L. HOM05D007294 ORTHO05D009205 7.0e-38 161.0 101 75.2
Eucgr.F03773 Eucalyptus grandis HOM05D007294 ORTHO05D009205 9.1e-38 160.6 144 61.8
PSO528G0176 Papaver somniferum HOM05D007294 ORTHO05D009205 2.0e-37 159.5 140 60.7
Psat0s375g0040 Pisum sativum HOM05D007294 ORTHO05D009205 2.6e-37 159.1 141 61.7
DCAR_014100 Daucus carota HOM05D007294 ORTHO05D009205 3.5e-37 158.7 140 62.1
Medtr3g072590 Medicago truncatula HOM05D007294 ORTHO05D009205 3.5e-37 158.7 135 63.7
SGA_v2.0_scaffold25G11113 Striga asiatica HOM05D007294 ORTHO05D009205 3.5e-37 158.7 146 57.5
CANSAT25G2515 Cannabis sativa HOM05D007294 ORTHO05D009205 5.9e-37 157.9 143 60.1
Ca_15198_v3 Cicer arietinum L. HOM05D007294 ORTHO05D009205 1.7e-36 156.4 99 76.8
Cc10_g10930 Coffea canephora HOM05D007294 ORTHO05D009205 1.7e-36 156.4 115 67.8
BcaC05g27437 Brassica carinata HOM05D007294 ORTHO05D009205 2.9e-36 155.6 122 63.9
BraA05t20931Z Brassica rapa HOM05D007294 ORTHO05D009205 2.9e-36 155.6 122 63.9
Phvul.009G123500 Phaseolus vulgaris HOM05D007294 ORTHO05D009205 2.9e-36 155.6 148 60.8
TWI12G0925 Tripterygium wilfordii HOM05D007294 ORTHO05D009205 5.0e-36 154.8 95 76.8
Glyma.04G251200 Glycine max HOM05D007294 ORTHO05D009205 6.5e-36 154.5 104 72.1
Lsat_1_v5_gn_6_112740 Lactuca sativa HOM05D007294 ORTHO05D009205 6.5e-36 154.5 136 62.5
Carub.0006s2684 Capsella rubella HOM05D007294 ORTHO05D009205 1.5e-35 153.3 103 71.8
C05p33890 Brassica napus HOM05D007294 ORTHO05D009205 3.2e-35 152.1 122 63.1
BolC5t32124H Brassica oleracea HOM05D007294 ORTHO05D009205 3.2e-35 152.1 122 63.1
Lj1g0002873 Lotus japonicus HOM05D007294 ORTHO05D009205 3.2e-35 152.1 98 75.5
Thhalv10029072m.g Eutrema salsugineum HOM05D007294 ORTHO05D009205 5.5e-35 151.4 121 63.6
AT4G08280 Arabidopsis thaliana HOM05D007294 ORTHO05D009205 7.2e-35 151.0 105 72.4
Sp6g09730 Schrenkiella parvula HOM05D007294 ORTHO05D009205 9.4e-35 150.6 124 61.3
AUR62023647 Chenopodium quinoa HOM05D007294 ORTHO05D009205 1.2e-34 150.2 104 72.1
ClCG11G015660 Citrullus lanatus HOM05D007294 ORTHO05D009205 1.6e-34 149.8 101 73.3
AL6G42020 Arabidopsis lyrata HOM05D007294 ORTHO05D009205 3.6e-34 148.7 101 71.3
MBI03_g33023_MAGBIO Magnolia biondii HOM05D007294 ORTHO05D009040 3.6e-34 148.7 91 75.8
HanXRQChr05g0151051 Helianthus annuus HOM05D007294 ORTHO05D009205 6.1e-34 147.9 105 67.6
Aa31LG9G14290 Aethionema arabicum HOM05D007294 ORTHO05D009205 1.4e-33 146.7 144 56.9
Nitab4.5_0002798g0020 Nicotiana tabacum HOM05D007294 ORTHO05D009205 4.0e-33 145.2 121 63.6
Nitab4.5_0001086g0040 Nicotiana tabacum HOM05D007294 ORTHO05D009205 2.0e-32 142.9 121 63.6
VMungo1309G1993 Vigna mungo HOM05D007294 ORTHO05D009205 2.0e-32 142.9 103 71.8
ECA246G4672 Erigeron canadensis HOM05D007294 ORTHO05D009205 9.7e-32 140.6 137 55.5
Os02g0767900 Oryza sativa ssp. japonica HOM05D007294 ORTHO05D009205 2.8e-31 139.0 103 66.0
Zm00001eb256090 Zea mays HOM05D007294 ORTHO05D009205 3.7e-31 138.7 104 66.3
Sc01g0001240 Simmondsia chinensis HOM05D007294 ORTHO05D009205 6.3e-31 137.9 130 56.9
Pp3c23_9240 Physcomitrium patens HOM05D007294 ORTHO05D009205 7.0e-30 134.4 91 63.7
SalBow6G4857 Salvia bowleyana HOM05D007294 ORTHO05D009205 7.0e-30 134.4 117 58.1
Dinv40407 Davidia involucrata HOM05D007294 ORTHO05D009205 9.1e-30 134.0 128 60.2
COL.COLO4_12212 Corchorus olitorius HOM05D007294 ORTHO05D009205 1.6e-29 133.3 90 70.0
vmacro12540 Vaccinium macrocarpon HOM05D007294 ORTHO05D009205 5.9e-29 131.3 98 67.3
SMO145G0156 Selaginella moellendorffii HOM05D007294 ORTHO05D009205 1.0e-28 130.6 118 55.9
FAN15G3738 Fragaria x ananassa HOM05D007294 ORTHO05D009205 2.2e-28 129.4 91 69.2
Hma1.2p1_0186F.1_g081590 Hydrangea macrophylla HOM05D007294 ORTHO05D009205 3.8e-28 128.6 100 66.0
QL09p035498 Quercus lobata HOM05D007294 ORTHO05D009205 5.0e-28 128.3 104 60.6
CSS0038217 Camellia sinensis var. sinensis HOM05D007294 ORTHO05D009205 8.5e-28 127.5 99 66.7
CBR_g48307 Chara braunii HOM05D007294 ORTHO05D009205 1.1e-27 127.1 90 60.0
AagrBONN_evm.TU.Sc2ySwM_368.1537 Anthoceros agrestis HOM05D007294 ORTHO05D009205 1.5e-27 126.7 104 55.8
Haze_00466 Corylus avellana HOM05D007294 ORTHO05D009205 2.5e-27 125.9 115 56.5
Atru.chr13.1423 Acer truncatum HOM05D007294 ORTHO05D009205 3.2e-27 125.6 115 58.3
FAN27G2899 Fragaria x ananassa HOM05D007294 ORTHO05D009205 4.2e-27 125.2 126 56.3
Rhsim06G0104800 Rhododendron simsii HOM05D007294 ORTHO05D009205 9.4e-27 124.0 71 77.5
BcaB05g23935 Brassica carinata HOM05D007294 ORTHO05D009205 2.3e-25 119.4 76 72.4
Mapoly0007s0151 Marchantia polymorpha HOM05D007294 ORTHO05D009205 3.4e-24 115.5 98 54.1
Ah.13g072640 Amaranthus hybridus HOM05D001216 ORTHO05D008355 1.7e-23 113.2 80 67.5
AUR62004727 Chenopodium quinoa HOM05D007294 ORTHO05D009205 2.2e-23 112.8 78 70.5
ATR0693G390 Amborella trichopoda HOM05D007294 ORTHO05D009205 8.3e-23 110.9 83 66.3
CDE08G0173 Ceratophyllum demersum HOM05D007294 ORTHO05D009205 2.4e-22 109.4 74 64.9
Cfa015999 Carpinus fangiana HOM05D000760 ORTHO05D009205 2.0e-21 106.3 80 62.5
CDE04G3292 Ceratophyllum demersum HOM05D007294 ORTHO05D009205 2.8e-18 95.9 112 45.5
CARHR259360 Cardamine hirsuta HOM05D007294 ORTHO05D009205 1.3e-15 87.0 53 73.6
Cpa.g.sc36.45 Carica papaya HOM05D007294 ORTHO05D009205 3.7e-15 85.5 75 58.7
MCO13G582 Micromonas commoda HOM05D007294 ORTHO05D009205 9.2e-14 80.9 103 40.8
Peaxi162Scf00395g00315 Petunia axillaris HOM05D007294 ORTHO05D009205 5.9e-13 78.2 121 41.3
Nn2g14282 Nelumbo nucifera HOM05D007294 ORTHO05D009205 8.0e-10 67.8 41 70.7
Dinv40402 Davidia involucrata HOM05D007294 ORTHO05D009205 2.0e-08 63.2 81 53.1


User provided reference genes

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