Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu026038.1 Olea europaea HOM05D004872 ORTHO05D006050 1.4e-64 249.6 138 100.0
Oeu040527.1 Olea europaea HOM05D004872 ORTHO05D006050 4.8e-57 224.6 138 92.0
MSTRG.1742 Avicennia marina HOM05D004872 ORTHO05D006050 6.3e-41 171.0 138 68.8
Manes.09G068000 Manihot esculenta HOM05D004872 ORTHO05D006050 4.2e-37 158.3 138 67.4
SGA_v2.0_scaffold144G35815 Striga asiatica HOM05D004872 ORTHO05D006050 1.2e-36 156.8 123 71.5
CSS0006428 Camellia sinensis var. sinensis HOM05D004872 ORTHO05D006050 3.0e-35 152.1 138 68.1
CAN.G1549.27 Capsicum annuum HOM05D004872 ORTHO05D006050 3.0e-35 152.1 128 64.8
PGSC0003DMG400003977 Solanum tuberosum HOM05D004872 ORTHO05D006050 4.0e-35 151.8 122 67.2
SalBow6G3136 Salvia bowleyana HOM05D004872 ORTHO05D006050 2.0e-34 149.4 118 66.1
Dinv22205 Davidia involucrata HOM05D004872 ORTHO05D006050 2.6e-34 149.1 138 67.4
Peaxi162Scf00025g02826 Petunia axillaris HOM05D004872 ORTHO05D006050 7.5e-34 147.5 121 65.3
GSVIVG01037356001 Vitis vinifera HOM05D004872 ORTHO05D006050 7.5e-34 147.5 120 69.2
Duzib150G1163 Durio zibethinus HOM05D004872 ORTHO05D006050 1.3e-33 146.7 124 63.7
Ciclev10006059m.g Citrus clementina HOM05D004872 ORTHO05D006050 2.2e-33 146.0 116 67.2
Cc11_g04500 Coffea canephora HOM05D004872 ORTHO05D006050 6.3e-33 144.4 115 68.7
Thecc.09G254600 Theobroma cacao HOM05D004872 ORTHO05D006050 6.3e-33 144.4 121 63.6
SalBow1G8122 Salvia bowleyana HOM05D004872 ORTHO05D006050 8.3e-33 144.1 115 65.2
Nitab4.5_0002138g0010 Nicotiana tabacum HOM05D004872 ORTHO05D006050 1.4e-32 143.3 119 65.5
Potri.013G075500 Populus trichocarpa HOM05D004872 ORTHO05D006050 1.4e-32 143.3 127 62.2
Atru.chr4.2930 Acer truncatum HOM05D004872 ORTHO05D006050 2.4e-32 142.5 139 59.7
DCAR_030961 Daucus carota HOM05D004872 ORTHO05D006050 2.4e-32 142.5 127 63.0
CiPaw.13G148000 Carya illinoinensis HOM05D004872 ORTHO05D006050 3.1e-32 142.1 125 60.8
Cpa.g.sc34.184 Carica papaya HOM05D004872 ORTHO05D006050 4.1e-32 141.7 141 61.7
Migut.E01400 Erythranthe guttata HOM05D004872 ORTHO05D006050 5.4e-32 141.4 121 64.5
Nitab4.5_0001582g0110 Nicotiana tabacum HOM05D004872 ORTHO05D006050 5.4e-32 141.4 121 63.6
Gohir.A09G108400 Gossypium hirsutum HOM05D004872 ORTHO05D006050 1.2e-31 140.2 120 62.5
FvH4_3g25170 Fragaria vesca HOM05D004872 ORTHO05D006050 7.7e-31 137.5 121 60.3
Prupe.7G012800 Prunus persica HOM05D004872 ORTHO05D006050 7.7e-31 137.5 129 60.5
RcHm_v2.0_Chr5g0046151 Rosa chinensis HOM05D004872 ORTHO05D006050 7.7e-31 137.5 121 60.3
THA.LOC104816943 Tarenaya hassleriana HOM05D004872 ORTHO05D006050 1.0e-30 137.1 118 62.7
FAN25G2824 Fragaria x ananassa HOM05D004872 ORTHO05D006050 1.3e-30 136.7 121 60.3
Solyc11g005570.2 Solanum lycopersicum HOM05D004872 ORTHO05D006050 1.3e-30 136.7 122 61.5
Sopen11g001540 Solanum pennellii HOM05D004872 ORTHO05D006050 1.3e-30 136.7 122 61.5
Rhsim07G0167900 Rhododendron simsii HOM05D004872 ORTHO05D006050 1.7e-30 136.3 124 61.3
Gohir.D09G105300 Gossypium hirsutum HOM05D004872 ORTHO05D006050 2.3e-30 136.0 120 61.7
FAN11G3172 Fragaria x ananassa HOM05D004872 ORTHO05D006050 2.9e-30 135.6 121 59.5
Sabra13G0065000 Salix brachista HOM05D004872 ORTHO05D006050 3.8e-30 135.2 142 55.6
Cfa009914 Carpinus fangiana HOM05D004872 ORTHO05D006050 6.6e-30 134.4 139 61.9
Prupe.4G268800 Prunus persica HOM05D004872 ORTHO05D006050 8.6e-30 134.0 128 58.6
Nn2g15815 Nelumbo nucifera HOM05D004872 ORTHO05D006050 1.9e-29 132.9 139 55.4
QL01p016491 Quercus lobata HOM05D004872 ORTHO05D006050 1.9e-29 132.9 122 60.7
QL01p024148 Quercus lobata HOM05D004872 ORTHO05D006050 1.9e-29 132.9 122 60.7
CiPaw.14G110500 Carya illinoinensis HOM05D004872 ORTHO05D006050 2.5e-29 132.5 139 56.1
TAR633G0253 Trochodendron aralioides HOM05D004872 ORTHO05D006050 7.2e-29 131.0 127 58.3
Haze_23271 Corylus avellana HOM05D004500 ORTHO05D005775 9.5e-29 130.6 138 59.4
ECA233G5422 Erigeron canadensis HOM05D004872 ORTHO05D006050 1.2e-28 130.2 110 63.6
ECA236G0590 Erigeron canadensis HOM05D004872 ORTHO05D006050 1.2e-28 130.2 110 63.6
Lsat_1_v5_gn_3_110040 Lactuca sativa HOM05D004872 ORTHO05D006050 1.6e-28 129.8 130 60.0
MD12G1010900 Malus domestica HOM05D004872 ORTHO05D006050 1.6e-28 129.8 124 55.6
Lsat_1_v5_gn_8_24740 Lactuca sativa HOM05D004872 ORTHO05D006050 2.8e-28 129.0 102 66.7
Gorai.006G122300 Gossypium raimondii HOM05D004872 ORTHO05D006050 3.6e-28 128.6 121 59.5
BraA05t19473Z Brassica rapa HOM05D004872 ORTHO05D006050 6.1e-28 127.9 107 63.6
CANSAT54G2026 Cannabis sativa HOM05D004872 ORTHO05D006050 1.0e-27 127.1 122 59.0
Psat2g130480 Pisum sativum HOM05D004872 ORTHO05D006050 1.0e-27 127.1 125 56.0
Sp4g26910 Schrenkiella parvula HOM05D004872 ORTHO05D006050 1.0e-27 127.1 112 61.6
Actinidia06989 Actinidia chinensis HOM05D004500 ORTHO05D005775 1.4e-27 126.7 90 73.3
CsaV3_6G038800 Cucumis sativus L. HOM05D004872 ORTHO05D006050 1.8e-27 126.3 108 58.3
Lj6g0009628 Lotus japonicus HOM05D004872 ORTHO05D006050 2.3e-27 125.9 128 56.2
Lj6g0013181 Lotus japonicus HOM05D004872 ORTHO05D006050 2.3e-27 125.9 128 56.2
Thhalv10019047m.g Eutrema salsugineum HOM05D004872 ORTHO05D006050 3.0e-27 125.6 111 60.4
Glyma.01G027700 Glycine max HOM05D004872 ORTHO05D006050 3.0e-27 125.6 130 57.7
Medtr7g096840 Medicago truncatula HOM05D004872 ORTHO05D006050 3.0e-27 125.6 128 56.2
Nn8g39701 Nelumbo nucifera HOM05D004872 ORTHO05D006050 3.0e-27 125.6 121 58.7
arahy.Tifrunner.gnm1.ann1.K1U5S9 Arachis hypogaea HOM05D004872 ORTHO05D006050 4.0e-27 125.2 131 55.7
BolC4t23202H Brassica oleracea HOM05D004872 ORTHO05D006050 5.2e-27 124.8 120 59.2
MELO3C014544.2 Cucumis melo HOM05D004872 ORTHO05D006050 5.2e-27 124.8 130 51.5
arahy.Tifrunner.gnm1.ann1.EX2XSN Arachis hypogaea HOM05D004872 ORTHO05D006050 1.2e-26 123.6 124 56.5
BcaB02g08868 Brassica carinata HOM05D004872 ORTHO05D006050 1.5e-26 123.2 116 61.2
CARHR140030 Cardamine hirsuta HOM05D004872 ORTHO05D006050 1.5e-26 123.2 106 62.3
Glyma.08G136100 Glycine max HOM05D004872 ORTHO05D006050 1.5e-26 123.2 129 56.6
arahy.Tifrunner.gnm1.ann1.U00P2R Arachis hypogaea HOM05D004872 ORTHO05D006050 2.0e-26 122.9 124 56.5
BcaC02g12267 Brassica carinata HOM05D004872 ORTHO05D006050 2.0e-26 122.9 107 62.6
C04p05820 Brassica napus HOM05D004872 ORTHO05D006050 2.0e-26 122.9 107 62.6
Carub.0004s2739 Capsella rubella HOM05D004872 ORTHO05D006050 2.6e-26 122.5 99 65.7
TPR.G29301 Trifolium pratense HOM05D004872 ORTHO05D006050 2.6e-26 122.5 126 54.8
A05p04990 Brassica napus HOM05D004872 ORTHO05D006050 3.4e-26 122.1 119 59.7
Sc11g0003110 Simmondsia chinensis HOM05D004872 ORTHO05D006050 3.4e-26 122.1 120 55.8
Aa31LG1G26360 Aethionema arabicum HOM05D004872 ORTHO05D006050 4.4e-26 121.7 123 58.5
BcaB02g10512 Brassica carinata HOM05D004872 ORTHO05D006050 4.4e-26 121.7 119 58.0
BolC4t22211H Brassica oleracea HOM05D004872 ORTHO05D006050 5.7e-26 121.3 107 61.7
COL.COLO4_24934 Corchorus olitorius HOM05D004872 ORTHO05D006050 7.5e-26 120.9 117 57.3
HanXRQChr08g0217181 Helianthus annuus HOM05D004872 ORTHO05D006050 7.5e-26 120.9 110 59.1
Manes.08G069866 Manihot esculenta HOM05D004872 ORTHO05D006050 7.5e-26 120.9 120 58.3
Eucgr.J02277 Eucalyptus grandis HOM05D004872 ORTHO05D006050 9.8e-26 120.6 122 56.6
arahy.Tifrunner.gnm1.ann1.R4J47E Arachis hypogaea HOM05D004872 ORTHO05D006050 1.3e-25 120.2 140 53.6
BraA05t20203Z Brassica rapa HOM05D004872 ORTHO05D006050 1.3e-25 120.2 119 57.1
Lalb_Chr04g0249071 Lupinus albus HOM05D004872 ORTHO05D006050 1.3e-25 120.2 125 57.6
AL4G43900 Arabidopsis lyrata HOM05D004872 ORTHO05D006050 1.7e-25 119.8 105 61.9
Sp2g10980 Schrenkiella parvula HOM05D004872 ORTHO05D006050 2.2e-25 119.4 121 57.9
TPR.G26917 Trifolium pratense HOM05D004872 ORTHO05D006050 2.2e-25 119.4 126 53.2
ClCG02G022680 Citrullus lanatus HOM05D004872 ORTHO05D006050 2.9e-25 119.0 131 48.9
Hma1.2p1_0299F.1_g117840 Hydrangea macrophylla HOM05D004872 ORTHO05D006050 2.9e-25 119.0 124 55.6
A05p12650 Brassica napus HOM05D004872 ORTHO05D006050 4.9e-25 118.2 119 55.5
AT2G44820 Arabidopsis thaliana HOM05D004872 ORTHO05D006050 6.3e-25 117.9 107 61.7
AUR62000220 Chenopodium quinoa HOM05D004872 ORTHO05D006050 8.3e-25 117.5 118 55.1
PSO017G2452 Papaver somniferum HOM05D004872 ORTHO05D006050 2.4e-24 115.9 131 51.1
PSO017G5814 Papaver somniferum HOM05D004872 ORTHO05D006050 2.4e-24 115.9 131 51.1
PSO529G0002 Papaver somniferum HOM05D004872 ORTHO05D006050 2.4e-24 115.9 131 51.1
PSO591G0356 Papaver somniferum HOM05D004872 ORTHO05D006050 2.4e-24 115.9 131 51.1
PSO705G0001 Papaver somniferum HOM05D004872 ORTHO05D006050 2.4e-24 115.9 131 51.1
HanXRQChr10g0315331 Helianthus annuus HOM05D004872 ORTHO05D006050 3.2e-24 115.5 110 58.2
Aqoxy7G03169 Aquilegia oxysepala HOM05D004872 ORTHO05D006050 4.1e-24 115.2 128 53.1
PSO591G0248 Papaver somniferum HOM05D004872 ORTHO05D006050 4.1e-24 115.2 131 51.1
Aqoxy2G00467 Aquilegia oxysepala HOM05D004872 ORTHO05D006050 7.0e-24 114.4 128 53.9
PSO541G2017 Papaver somniferum HOM05D004872 ORTHO05D006050 9.2e-24 114.0 131 50.4
vmacro05825 Vaccinium macrocarpon HOM05D004872 ORTHO05D006050 9.2e-24 114.0 153 47.7
Ah.04g159640 Amaranthus hybridus HOM05D004872 ORTHO05D006050 1.6e-23 113.2 144 55.6
TWI31G0308 Tripterygium wilfordii HOM05D004872 ORTHO05D006050 1.6e-23 113.2 144 50.0
AUR62006565 Chenopodium quinoa HOM05D004872 ORTHO05D006050 2.0e-23 112.8 102 61.8
VMungo0251G0214 Vigna mungo HOM05D004872 ORTHO05D006050 3.5e-23 112.1 128 52.3
Phvul.002G255800 Phaseolus vulgaris HOM05D004872 ORTHO05D006050 4.6e-23 111.7 123 52.8
Aqoxy1G01418 Aquilegia oxysepala HOM05D004872 ORTHO05D006050 5.9e-23 111.3 128 52.3
EL10Ac4g10086 Beta vulgaris HOM05D004872 ORTHO05D006050 1.0e-22 110.5 102 58.8
Aqoxy72s001 Aquilegia oxysepala HOM05D004872 ORTHO05D006050 3.9e-22 108.6 128 51.6
CiPaw.13G148200 Carya illinoinensis HOM05D004872 ORTHO05D006050 5.0e-22 108.2 127 50.4
Hund07423 Selenicereus undatus HOM05D004872 ORTHO05D006050 8.6e-22 107.5 98 62.2
MBI17_g09534_MAGBIO Magnolia biondii HOM05D004872 ORTHO05D006050 3.3e-21 105.5 124 50.8
Sed0007255 Sechium edule HOM05D004872 ORTHO05D006050 4.3e-21 105.1 108 57.4
ATR0665G028 Amborella trichopoda HOM05D004872 ORTHO05D006050 1.6e-20 103.2 119 49.6
BcaC02g11364 Brassica carinata HOM05D004872 ORTHO05D006050 1.6e-20 103.2 129 51.2
CDE05G2894 Ceratophyllum demersum HOM05D004872 ORTHO05D006050 1.8e-19 99.8 120 49.2
Aa31LG9G10050 Aethionema arabicum HOM05D004872 ORTHO05D006050 3.1e-19 99.0 132 48.5
AL7G43510 Arabidopsis lyrata HOM05D004872 ORTHO05D006050 5.8e-18 94.7 129 46.5
Os01g0224500 Oryza sativa ssp. japonica HOM05D004872 ORTHO05D006050 1.3e-17 93.6 129 46.5
Sc11g0003120 Simmondsia chinensis HOM05D004872 ORTHO05D006050 1.3e-17 93.6 101 53.5
HPP92_015870 Vanilla planifolia HOM05D004872 ORTHO05D006050 5.4e-16 88.2 123 46.3
Zm00001eb192850 Zea mays HOM05D004872 ORTHO05D006050 5.4e-16 88.2 128 45.3
arahy.Tifrunner.gnm1.ann1.X2Q8UN Arachis hypogaea HOM05D004872 ORTHO05D006050 3.5e-15 85.5 112 44.6
Zm00001eb281550 Zea mays HOM05D004872 ORTHO05D006050 1.0e-14 84.0 123 44.7
PGR102G1802 Punica granatum HOM05D004872 ORTHO05D006050 1.8e-11 73.2 132 37.9
Atru.chr1.3406 Acer truncatum HOM05D004872 ORTHO05D006050 5.2e-11 71.6 92 50.0
Aqoxy7G03168 Aquilegia oxysepala HOM05D004872 ORTHO05D006050 5.2e-11 71.6 128 38.3
TPR.G14060 Trifolium pratense HOM05D004872 ORTHO05D006050 1.3e-09 67.0 118 43.2
Zm00001eb416880 Zea mays HOM05D004872 ORTHO05D006050 2.9e-09 65.9 107 42.1
Pp3c23_7100 Physcomitrium patens HOM05D004872 ORTHO05D006050 1.2e-07 60.5 108 36.1
SEGI_13451 Sequoiadendron giganteum HOM05D004872 ORTHO05D006050 1.2e-07 60.5 97 40.2
Mapoly0036s0026 Marchantia polymorpha HOM05D004872 ORTHO05D006050 4.6e-07 58.5 127 33.9
AL225U10020 Arabidopsis lyrata HOM05D004872 ORTHO05D006050 1.7e-06 56.6 55 56.4
AagrBONN_evm.TU.Sc2ySwM_362.236 Anthoceros agrestis HOM05D004872 ORTHO05D006050 8.6e-06 54.3 135 31.9


User provided reference genes

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