Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu026007.1 Olea europaea HOM05D004441 ORTHO05D003109 4.6e-147 524.6 279 100.0
Oeu029188.1 Olea europaea HOM05D004441 ORTHO05D003109 1.5e-49 200.7 298 49.7
Cc00_g11510 Coffea canephora HOM05D004441 ORTHO05D003109 1.3e-45 187.6 295 47.8
SalBow8G3623 Salvia bowleyana HOM05D004441 ORTHO05D003109 2.3e-45 186.8 293 48.1
SalBow8G4382 Salvia bowleyana HOM05D004441 ORTHO05D003109 2.3e-45 186.8 293 48.1
Migut.M01162 Erythranthe guttata HOM05D004441 ORTHO05D003109 1.2e-43 181.0 310 43.9
Nitab4.5_0001820g0050 Nicotiana tabacum HOM05D004441 ORTHO05D003109 1.2e-38 164.5 288 45.1
Nitab4.5_0007319g0010 Nicotiana tabacum HOM05D004441 ORTHO05D003109 1.9e-36 157.1 289 44.3
Solyc02g078760.1 Solanum lycopersicum HOM05D004441 ORTHO05D003109 3.0e-34 149.8 287 43.6
Sopen02g023590 Solanum pennellii HOM05D004441 ORTHO05D003109 3.7e-32 142.9 287 42.2
SGA_v2.0_scaffold100G29660 Striga asiatica HOM05D004441 ORTHO05D003109 1.1e-31 141.4 271 41.0
Dinv40519 Davidia involucrata HOM05D004441 ORTHO05D003109 4.1e-31 139.4 261 42.1
Dinv39787 Davidia involucrata HOM05D004441 ORTHO05D003109 7.0e-31 138.7 300 41.7
Lj1A1210T53 Lonicera japonica HOM05D004441 ORTHO05D003109 4.6e-30 136.0 289 39.8
Hma1.2p1_0191F.1_g083410 Hydrangea macrophylla HOM05D004441 ORTHO05D003109 6.6e-29 132.1 297 42.8
Hma1.2p1_2209F.1_g317155 Hydrangea macrophylla HOM05D004441 ORTHO05D003109 6.6e-29 132.1 297 42.8
PGSC0003DMG400022372 Solanum tuberosum HOM05D004441 ORTHO05D003109 6.6e-29 132.1 287 40.8
DCAR_004123 Daucus carota HOM05D004441 ORTHO05D003109 3.3e-28 129.8 292 42.5
SGA_v2.0_scaffold22G09746 Striga asiatica HOM05D004441 ORTHO05D003109 4.4e-25 119.4 262 38.5
CiPaw.09G160900 Carya illinoinensis HOM05D004441 ORTHO05D003109 7.0e-23 112.1 301 35.2
Glyma.13G244100 Glycine max HOM05D004441 ORTHO05D003109 1.6e-22 110.9 300 38.7
VMungo0540G1643 Vigna mungo HOM05D004441 ORTHO05D003109 3.5e-22 109.8 297 36.4
Duzib160G0195 Durio zibethinus HOM05D004441 ORTHO05D003109 6.0e-22 109.0 316 34.2
Phvul.006G189700 Phaseolus vulgaris HOM05D004441 ORTHO05D003109 7.8e-22 108.6 292 36.0
arahy.Tifrunner.gnm1.ann1.KXRU9A Arachis hypogaea HOM05D004441 ORTHO05D003109 1.3e-21 107.8 292 37.0
Hma1.2p1_0835F.1_g225850 Hydrangea macrophylla HOM05D004441 ORTHO05D003109 1.3e-21 107.8 285 37.2
Hma1.2p1_0835F.1_g225855 Hydrangea macrophylla HOM05D004441 ORTHO05D003109 1.3e-21 107.8 285 37.2
Rhsim13G0175700 Rhododendron simsii HOM05D004441 ORTHO05D003109 1.3e-21 107.8 306 38.2
TAR629G3100 Trochodendron aralioides HOM05D004441 ORTHO05D003109 1.3e-21 107.8 316 36.1
Lj6g0023239 Lotus japonicus HOM05D004441 ORTHO05D003109 6.6e-21 105.5 303 35.3
Peaxi162Scf00612g00043 Petunia axillaris HOM05D004441 ORTHO05D003109 8.6e-21 105.1 285 35.8
Psat1g207120 Pisum sativum HOM05D004441 ORTHO05D003109 1.5e-20 104.4 303 36.6
Lalb_Chr15g0089961 Lupinus albus HOM05D004441 ORTHO05D003109 4.3e-20 102.8 283 35.0
Gohir.A06G124300 Gossypium hirsutum HOM05D004441 ORTHO05D003109 5.6e-20 102.4 305 35.1
Manes.17G041200 Manihot esculenta HOM05D004441 ORTHO05D003109 5.6e-20 102.4 328 38.1
Thecc.06G194800 Theobroma cacao HOM05D004441 ORTHO05D003109 9.5e-20 101.7 314 35.4
Ca_00297_v3 Cicer arietinum L. HOM05D004441 ORTHO05D003109 1.2e-19 101.3 299 36.1
Gohir.A05G163400 Gossypium hirsutum HOM05D004441 ORTHO05D003109 2.1e-19 100.5 325 33.5
Sc17g0006420 Simmondsia chinensis HOM05D004441 ORTHO05D003109 2.1e-19 100.5 317 36.3
Glyma.15G069600 Glycine max HOM05D004441 ORTHO05D003109 2.8e-19 100.1 297 37.4
Prupe.4G040000 Prunus persica HOM05D004441 ORTHO05D003109 6.2e-19 99.0 336 35.1
Gorai.010G150800 Gossypium raimondii HOM05D004441 ORTHO05D003109 1.8e-18 97.4 305 34.4
TPR.G36719 Trifolium pratense HOM05D004441 ORTHO05D003109 1.8e-18 97.4 303 34.3
Duzib192G0975 Durio zibethinus HOM05D004441 ORTHO05D003109 4.0e-18 96.3 322 34.2
Gohir.D06G129200 Gossypium hirsutum HOM05D004441 ORTHO05D003109 5.2e-18 95.9 305 33.8
PGR004G2153 Punica granatum HOM05D004441 ORTHO05D003109 6.8e-18 95.5 335 35.8
Gorai.009G171500 Gossypium raimondii HOM05D004441 ORTHO05D003109 8.9e-18 95.1 322 33.5
Medtr2g012750 Medicago truncatula HOM05D004441 ORTHO05D003109 8.9e-18 95.1 299 35.1
Potri.011G045700 Populus trichocarpa HOM05D004441 ORTHO05D003109 1.2e-17 94.7 325 35.7
Gohir.D05G166400 Gossypium hirsutum HOM05D004441 ORTHO05D003109 1.5e-17 94.4 322 33.9
COL.COLO4_31538 Corchorus olitorius HOM05D004441 ORTHO05D003109 2.6e-17 93.6 325 33.8
FAN16G1227 Fragaria x ananassa HOM05D004441 ORTHO05D003109 5.8e-17 92.4 308 34.7
Cfa000385 Carpinus fangiana HOM05D004441 ORTHO05D003109 7.5e-17 92.0 315 32.4
FAN25G3261 Fragaria x ananassa HOM05D004441 ORTHO05D003109 4.9e-16 89.4 308 34.1
ClCG03G005640 Citrullus lanatus HOM05D004441 ORTHO05D003109 6.4e-16 89.0 314 33.4
Lalb_Chr20g0122111 Lupinus albus HOM05D004441 ORTHO05D003109 6.4e-16 89.0 296 33.1
Lsat_1_v5_gn_7_20000 Lactuca sativa HOM05D004441 ORTHO05D003109 1.1e-15 88.2 303 35.0
Sabra11G0031800 Salix brachista HOM05D004441 ORTHO05D003109 1.9e-15 87.4 326 32.8
Cc05_g06660 Coffea canephora HOM05D009304 ORTHO05D003109 1.2e-14 84.7 318 34.0
TAR626G0020 Trochodendron aralioides HOM05D004441 ORTHO05D003109 1.2e-14 84.7 257 36.2
Haze_06542 Corylus avellana HOM05D004441 ORTHO05D003109 1.6e-14 84.3 314 31.2
CsaV3_6G049880 Cucumis sativus L. HOM05D004441 ORTHO05D003109 1.6e-14 84.3 303 33.0
FAN11G1619 Fragaria x ananassa HOM05D004441 ORTHO05D003109 1.6e-14 84.3 314 32.8
FvH4_3g04520 Fragaria vesca HOM05D004441 ORTHO05D003109 2.7e-14 83.6 310 33.5
TWI63G0258 Tripterygium wilfordii HOM05D004441 ORTHO05D003109 2.7e-14 83.6 317 33.4
Manes.16G023200 Manihot esculenta HOM05D004441 ORTHO05D003109 4.6e-14 82.8 334 34.4
Nitab4.5_0003018g0090 Nicotiana tabacum HOM05D009304 ORTHO05D003109 4.6e-14 82.8 321 32.7
Lsat_1_v5_gn_4_55461 Lactuca sativa HOM05D004441 ORTHO05D003109 6.0e-14 82.4 294 35.0
Lalb_Chr18g0059831 Lupinus albus HOM05D004441 ORTHO05D003109 6.0e-14 82.4 293 31.7
PSO675G8062 Papaver somniferum HOM05D004441 ORTHO05D003109 6.0e-14 82.4 338 29.0
QL08p037640 Quercus lobata HOM05D010652 ORTHO05D003109 1.0e-13 81.6 328 35.4
FAN21G2327 Fragaria x ananassa HOM05D004441 ORTHO05D003109 1.3e-13 81.3 309 32.7
MD10G1300500 Malus domestica HOM05D004441 ORTHO05D003109 1.3e-13 81.3 334 31.4
Aqoxy4G01294 Aquilegia oxysepala HOM05D004441 ORTHO05D003109 1.7e-13 80.9 272 34.6
Peaxi162Scf00007g00287 Petunia axillaris HOM05D009304 ORTHO05D003109 1.7e-13 80.9 267 34.5
Potri.004G037100 Populus trichocarpa HOM05D004441 ORTHO05D003109 1.7e-13 80.9 330 34.5
PGSC0003DMG400018324 Solanum tuberosum HOM05D009304 ORTHO05D003109 1.7e-13 80.9 300 33.7
TWI38G0459 Tripterygium wilfordii HOM05D004441 ORTHO05D003109 3.9e-13 79.7 312 31.4
arahy.Tifrunner.gnm1.ann1.W0S7NR Arachis hypogaea HOM05D004441 ORTHO05D003109 5.1e-13 79.3 192 38.0
ClCG00G003130 Citrullus lanatus HOM05D004441 ORTHO05D003109 5.1e-13 79.3 303 32.3
ClCG01G022730 Citrullus lanatus HOM05D004441 ORTHO05D003109 5.1e-13 79.3 303 32.3
MELO3C007307.2 Cucumis melo HOM05D004441 ORTHO05D003109 5.1e-13 79.3 303 31.7
RcHm_v2.0_Chr5g0007441 Rosa chinensis HOM05D004441 ORTHO05D003109 6.6e-13 79.0 328 33.5
Solyc07g054560.1 Solanum lycopersicum HOM05D009304 ORTHO05D003109 8.6e-13 78.6 313 31.9
TAR627G0319 Trochodendron aralioides HOM05D004441 ORTHO05D003109 8.6e-13 78.6 203 36.9
Lsat_1_v5_gn_4_70241 Lactuca sativa HOM05D009304 ORTHO05D003109 1.1e-12 78.2 299 30.1
Sopen07g028460 Solanum pennellii HOM05D009304 ORTHO05D003109 1.5e-12 77.8 313 31.9
Sabra04G0022600 Salix brachista HOM05D004441 ORTHO05D003109 2.5e-12 77.0 329 34.3
Actinidia05598 Actinidia chinensis HOM05D004441 ORTHO05D003109 3.3e-12 76.6 259 35.1
arahy.Tifrunner.gnm1.ann1.7X1CID Arachis hypogaea HOM05D010177 ORTHO05D003109 3.3e-12 76.6 341 30.8
CsaV3_1G011910 Cucumis sativus L. HOM05D004441 ORTHO05D003109 7.3e-12 75.5 320 31.6
MBI18_g13205_MAGBIO Magnolia biondii HOM05D004441 ORTHO05D003109 9.5e-12 75.1 288 34.4
Aqoxy1G02647 Aquilegia oxysepala HOM05D004441 ORTHO05D003109 1.2e-11 74.7 322 31.1
Cpa.g.sc27.93 Carica papaya HOM05D004441 ORTHO05D003109 2.8e-11 73.6 319 32.9
Psat0s2678g0120 Pisum sativum HOM05D004441 ORTHO05D003109 2.8e-11 73.6 292 32.9
Lj1A733T64 Lonicera japonica HOM05D009304 ORTHO05D003109 6.2e-11 72.4 317 29.3
Ciclev10015894m.g Citrus clementina HOM05D004441 ORTHO05D003109 1.1e-10 71.6 337 30.0
Nitab4.5_0002370g0010 Nicotiana tabacum HOM05D009304 ORTHO05D003109 1.4e-10 71.2 283 32.2
Migut.H01500 Erythranthe guttata HOM05D004441 ORTHO05D003109 2.4e-10 70.5 123 42.3
PSO541G1557 Papaver somniferum HOM05D004441 ORTHO05D003109 4.0e-10 69.7 346 28.3
Actinidia11074 Actinidia chinensis HOM05D002331 ORTHO05D003109 5.2e-10 69.3 295 32.5
BraA01t03127Z Brassica rapa HOM05D004441 ORTHO05D003109 5.2e-10 69.3 283 29.3
ClCG02G001220 Citrullus lanatus HOM05D032711 ORTHO05D003109 5.2e-10 69.3 267 31.1
BcaC09g49327 Brassica carinata HOM05D004441 ORTHO05D003109 6.8e-10 68.9 283 29.3
C01p37890 Brassica napus HOM05D004441 ORTHO05D003109 6.8e-10 68.9 283 29.3
BolC1t03749H Brassica oleracea HOM05D004441 ORTHO05D003109 6.8e-10 68.9 283 29.3
Nitab4.5_0001833g0010 Nicotiana tabacum HOM05D021131 ORTHO05D022971 6.8e-10 68.9 358 29.9
ECA236G4168 Erigeron canadensis HOM05D004441 ORTHO05D003109 8.9e-10 68.6 295 32.5
A01p29970 Brassica napus HOM05D004441 ORTHO05D003109 2.0e-09 67.4 283 29.3
Cpa.g.sc34.119 Carica papaya HOM05D004441 ORTHO05D003109 2.0e-09 67.4 329 34.3
Dinv23691 Davidia involucrata HOM05D009304 ORTHO05D003109 2.0e-09 67.4 270 33.7
Sed0013174 Sechium edule HOM05D004441 ORTHO05D003109 2.0e-09 67.4 296 33.4
Sed0025630 Sechium edule HOM05D004441 ORTHO05D003109 2.6e-09 67.0 285 30.9
CsaV3_7G004220 Cucumis sativus L. HOM05D032711 ORTHO05D003109 3.4e-09 66.6 268 32.1
Phvul.002G224300 Phaseolus vulgaris HOM05D004441 ORTHO05D003109 5.8e-09 65.9 299 30.4
Glyma.13G184100 Glycine max HOM05D004441 ORTHO05D003109 1.7e-08 64.3 294 30.6
Medtr4g089190 Medicago truncatula HOM05D004441 ORTHO05D003109 2.2e-08 63.9 291 31.6
Haze_13109 Corylus avellana HOM05D010652 ORTHO05D003109 3.8e-08 63.2 300 31.3
Nitab4.5_0008104g0020 Nicotiana tabacum HOM05D021131 ORTHO05D022971 3.8e-08 63.2 98 41.8
Manes.13G149800 Manihot esculenta HOM05D010652 ORTHO05D003109 4.9e-08 62.8 302 31.5
Cfa014564 Carpinus fangiana HOM05D010652 ORTHO05D003109 6.4e-08 62.4 305 29.8
AL2G15180 Arabidopsis lyrata HOM05D004441 ORTHO05D003109 1.1e-07 61.6 291 28.9
BcaB04g20321 Brassica carinata HOM05D004441 ORTHO05D003109 1.1e-07 61.6 285 30.2
THA.LOC104809557 Tarenaya hassleriana HOM05D004441 ORTHO05D003109 1.1e-07 61.6 314 29.9
ECA234G2831 Erigeron canadensis HOM05D004441 ORTHO05D003109 1.4e-07 61.2 307 31.6
Eucgr.D00694 Eucalyptus grandis HOM05D004441 ORTHO05D003109 1.4e-07 61.2 333 30.0
Sp2g03290 Schrenkiella parvula HOM05D004441 ORTHO05D003109 1.4e-07 61.2 283 29.7
A06p07830 Brassica napus HOM05D004441 ORTHO05D003109 2.4e-07 60.5 308 30.5
CSS0013822 Camellia sinensis var. sinensis HOM05D009304 ORTHO05D003109 4.1e-07 59.7 313 31.3
Solyc03g006600.1 Solanum lycopersicum HOM05D021131 ORTHO05D022971 4.1e-07 59.7 99 42.4
Sopen03g002610 Solanum pennellii HOM05D021131 ORTHO05D022971 4.1e-07 59.7 104 41.3
BraA06t23983Z Brassica rapa HOM05D004441 ORTHO05D003109 5.4e-07 59.3 308 30.2
Lalb_Chr14g0366711 Lupinus albus HOM05D010177 ORTHO05D003109 7.1e-07 58.9 303 27.7
Atru.chr10.1971 Acer truncatum HOM05D004441 ORTHO05D003109 9.2e-07 58.5 309 30.1
AT1G61170 Arabidopsis thaliana HOM05D004441 ORTHO05D003109 9.2e-07 58.5 284 30.3
CSS0028025 Camellia sinensis var. sinensis HOM05D009304 ORTHO05D003109 1.6e-06 57.8 313 31.0
CARHR011330 Cardamine hirsuta HOM05D004441 ORTHO05D003109 1.6e-06 57.8 284 28.5
VMungo0251G2507 Vigna mungo HOM05D004441 ORTHO05D003109 1.6e-06 57.8 299 28.1
A03p66730 Brassica napus HOM05D004441 ORTHO05D003109 2.1e-06 57.4 282 29.4
BraA01t02809Z Brassica rapa HOM05D004441 ORTHO05D003109 2.1e-06 57.4 282 29.4
Sed0017971 Sechium edule HOM05D002331 ORTHO05D002624 2.1e-06 57.4 270 29.3
Hma1.2p1_0875F.1_g231510 Hydrangea macrophylla HOM05D009304 ORTHO05D003109 2.7e-06 57.0 259 32.8
Psat7g199680 Pisum sativum HOM05D010177 ORTHO05D003109 2.7e-06 57.0 344 29.4
Sed0005410 Sechium edule HOM05D002331 ORTHO05D002624 3.5e-06 56.6 269 29.4
ECA234G0694 Erigeron canadensis HOM05D009304 ORTHO05D003109 6.0e-06 55.8 294 27.6
Carub.0002s0400 Capsella rubella HOM05D004441 ORTHO05D003109 7.8e-06 55.5 296 29.1
DCAR_009737 Daucus carota HOM05D009304 ORTHO05D003109 7.8e-06 55.5 311 30.9
Lalb_Chr19g0135401 Lupinus albus HOM05D010177 ORTHO05D003109 7.8e-06 55.5 294 30.6
Peaxi162Scf00137g00062 Petunia axillaris HOM05D021131 ORTHO05D022971 7.8e-06 55.5 265 35.1
VMungo1080G0072 Vigna mungo HOM05D010177 ORTHO05D003109 7.8e-06 55.5 288 30.6


User provided reference genes

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