Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu025960.1 Olea europaea HOM05D003761 ORTHO05D004412 1.1e-107 393.3 193 100.0
Oeu025400.1 Olea europaea HOM05D003761 ORTHO05D004412 1.7e-63 246.5 165 72.1
MSTRG.14590 Avicennia marina HOM05D003761 ORTHO05D004412 4.4e-48 195.3 199 52.3
Oeu002779.1 Olea europaea HOM05D003761 ORTHO05D004412 2.7e-45 186.0 191 52.4
Migut.H01629 Erythranthe guttata HOM05D003761 ORTHO05D004412 5.0e-44 181.8 174 54.6
Oeu057021.1 Olea europaea HOM05D003761 ORTHO05D004412 3.6e-42 175.6 139 59.0
MSTRG.7132 Avicennia marina HOM05D003761 ORTHO05D004412 2.3e-41 172.9 177 52.5
MSTRG.13107 Avicennia marina HOM05D003761 ORTHO05D004412 1.5e-40 170.2 187 50.8
SGA_v2.0_scaffold7G03701 Striga asiatica HOM05D003761 ORTHO05D004412 1.2e-37 160.6 177 52.0
ECA248G3040 Erigeron canadensis HOM05D003761 ORTHO05D004412 4.2e-35 152.1 175 46.3
Hma1.2p1_1175F.1_g263990 Hydrangea macrophylla HOM05D003761 ORTHO05D004412 4.2e-35 152.1 144 53.5
Dinv15342 Davidia involucrata HOM05D003761 ORTHO05D004412 1.2e-34 150.6 154 51.3
Lj2C256G8 Lonicera japonica HOM05D003761 ORTHO05D004412 1.6e-34 150.2 169 48.5
SGA_v2.0_scaffold186G40120 Striga asiatica HOM05D003761 ORTHO05D004412 1.6e-34 150.2 163 49.7
Actinidia39257 Actinidia chinensis HOM05D003761 ORTHO05D004412 2.1e-34 149.8 165 47.9
Rhsim13G0141000 Rhododendron simsii HOM05D003761 ORTHO05D004412 2.1e-34 149.8 194 44.3
Potri.006G005600 Populus trichocarpa HOM05D003761 ORTHO05D004412 8.0e-34 147.9 186 42.5
CSS0009294 Camellia sinensis var. sinensis HOM05D003761 ORTHO05D004412 1.4e-33 147.1 155 51.0
CSS0045719 Camellia sinensis var. sinensis HOM05D003761 ORTHO05D004412 1.4e-33 147.1 155 51.0
CAN.G1186.30 Capsicum annuum HOM05D003761 ORTHO05D004412 1.4e-33 147.1 145 51.0
Sabra06G0004500 Salix brachista HOM05D003761 ORTHO05D004412 2.3e-33 146.4 187 43.9
Migut.M01442 Erythranthe guttata HOM05D003761 ORTHO05D004412 5.2e-33 145.2 177 46.9
SalBow8G1906 Salvia bowleyana HOM05D003761 ORTHO05D004412 6.8e-33 144.8 161 47.8
Lsat_1_v5_gn_7_13080 Lactuca sativa HOM05D003761 ORTHO05D004412 1.5e-32 143.7 177 46.3
Actinidia11903 Actinidia chinensis HOM05D003761 ORTHO05D004412 3.4e-32 142.5 183 45.4
Gohir.A06G204100 Gossypium hirsutum HOM05D003761 ORTHO05D004412 3.4e-32 142.5 162 45.7
Peaxi162Scf00558g00515 Petunia axillaris HOM05D003761 ORTHO05D004412 3.4e-32 142.5 156 49.4
Cc09_g00350 Coffea canephora HOM05D003761 ORTHO05D004412 4.4e-32 142.1 155 51.6
Gorai.010G248800 Gossypium raimondii HOM05D003761 ORTHO05D004412 4.4e-32 142.1 161 46.6
PGSC0003DMG400013274 Solanum tuberosum HOM05D003761 ORTHO05D004412 4.4e-32 142.1 138 52.2
Sopen11g006960 Solanum pennellii HOM05D003761 ORTHO05D004412 1.7e-31 140.2 146 48.6
TAR626G0912 Trochodendron aralioides HOM05D003761 ORTHO05D004412 2.2e-31 139.8 166 45.8
CiPaw.09G108600 Carya illinoinensis HOM05D003761 ORTHO05D004412 2.8e-31 139.4 152 48.7
HanXRQChr01g0003591 Helianthus annuus HOM05D003761 ORTHO05D004412 2.8e-31 139.4 185 40.5
Gohir.D06G217400 Gossypium hirsutum HOM05D003761 ORTHO05D004412 3.7e-31 139.0 161 45.3
Lsat_1_v5_gn_1_130120 Lactuca sativa HOM05D003761 ORTHO05D004412 4.9e-31 138.7 164 43.3
Thecc.06G240300 Theobroma cacao HOM05D003761 ORTHO05D004412 1.1e-30 137.5 153 46.4
vmacro03612 Vaccinium macrocarpon HOM05D003761 ORTHO05D004412 1.1e-30 137.5 181 45.3
Lj4g0001357 Lotus japonicus HOM05D003761 ORTHO05D004412 1.4e-30 137.1 185 40.0
SGA_v2.0_scaffold49G18223 Striga asiatica HOM05D003761 ORTHO05D004412 1.8e-30 136.7 170 43.5
Solyc11g012170.1 Solanum lycopersicum HOM05D003761 ORTHO05D004412 3.2e-30 136.0 138 50.0
Duzib192G0597 Durio zibethinus HOM05D003761 ORTHO05D004412 4.1e-30 135.6 183 40.4
arahy.Tifrunner.gnm1.ann1.UZ71G8 Arachis hypogaea HOM05D003761 ORTHO05D004412 5.4e-30 135.2 172 43.0
MBI18_g42884_MAGBIO Magnolia biondii HOM05D003761 ORTHO05D004412 5.4e-30 135.2 152 47.4
Ciclev10016770m.g Citrus clementina HOM05D003761 ORTHO05D004412 1.2e-29 134.0 193 40.4
Potri.016G006200 Populus trichocarpa HOM05D003761 ORTHO05D004412 3.5e-29 132.5 190 42.6
arahy.Tifrunner.gnm1.ann1.YY2BB8 Arachis hypogaea HOM05D003761 ORTHO05D004412 4.6e-29 132.1 173 43.4
Psat4g002880 Pisum sativum HOM05D003761 ORTHO05D004412 4.6e-29 132.1 185 43.2
Haze_07014 Corylus avellana HOM05D003761 ORTHO05D004412 1.3e-28 130.6 175 42.9
PGR042G2523 Punica granatum HOM05D003761 ORTHO05D004412 1.7e-28 130.2 180 41.1
CANSAT56G1869 Cannabis sativa HOM05D003761 ORTHO05D004412 2.9e-28 129.4 125 48.8
Nitab4.5_0000143g0280 Nicotiana tabacum HOM05D003761 ORTHO05D004412 2.9e-28 129.4 140 49.3
Cpa.g.sc27.232 Carica papaya HOM05D003761 ORTHO05D004412 3.9e-28 129.0 134 44.8
MBI18_g27019_MAGBIO Magnolia biondii HOM05D003761 ORTHO05D004412 3.9e-28 129.0 142 47.9
Glyma.17G005900 Glycine max HOM05D003761 ORTHO05D004412 5.0e-28 128.6 139 46.8
Nn1g07502 Nelumbo nucifera HOM05D003761 ORTHO05D004412 6.6e-28 128.3 177 42.9
Cfa000041 Carpinus fangiana HOM05D003761 ORTHO05D004412 1.1e-27 127.5 176 42.6
Ca_20995_v3 Cicer arietinum L. HOM05D003761 ORTHO05D004412 1.5e-27 127.1 141 46.1
Eucgr.L00155 Eucalyptus grandis HOM05D003761 ORTHO05D004412 1.5e-27 127.1 165 38.8
Sed0021615 Sechium edule HOM05D003761 ORTHO05D004412 1.5e-27 127.1 156 37.2
unitig_52.g17560 Utricularia gibba HOM05D003761 ORTHO05D004412 1.5e-27 127.1 199 40.2
Atru.chr1.2273 Acer truncatum HOM05D003761 ORTHO05D004412 2.5e-27 126.3 146 43.2
Aqoxy4G01086 Aquilegia oxysepala HOM05D003761 ORTHO05D004412 2.5e-27 126.3 184 41.8
MD10G1338600 Malus domestica HOM05D003761 ORTHO05D004412 4.3e-27 125.6 224 34.8
Manes.09G083000 Manihot esculenta HOM05D003761 ORTHO05D004412 4.3e-27 125.6 190 40.5
COL.COLO4_31936 Corchorus olitorius HOM05D003761 ORTHO05D004412 5.6e-27 125.2 155 41.9
Sabra16G0011000 Salix brachista HOM05D003761 ORTHO05D004412 5.6e-27 125.2 145 44.8
QL05p067831 Quercus lobata HOM05D003761 ORTHO05D004412 7.3e-27 124.8 178 41.0
Sed0014180 Sechium edule HOM05D003761 ORTHO05D004412 9.5e-27 124.4 168 38.1
Sc24g0000400 Simmondsia chinensis HOM05D003761 ORTHO05D004412 9.5e-27 124.4 133 49.6
MBI19_g14888_MAGBIO Magnolia biondii HOM05D003761 ORTHO05D004412 1.2e-26 124.0 156 46.2
AUR62012843 Chenopodium quinoa HOM05D003761 ORTHO05D004412 3.6e-26 122.5 143 44.8
AUR62021816 Chenopodium quinoa HOM05D003761 ORTHO05D004412 3.6e-26 122.5 144 45.8
GSVIVG01005138001 Vitis vinifera HOM05D003761 ORTHO05D004412 3.6e-26 122.5 131 48.1
VMungo1215G0779 Vigna mungo HOM05D003761 ORTHO05D004412 6.1e-26 121.7 136 44.1
BolC4t28284H Brassica oleracea HOM05D003761 ORTHO05D004412 8.0e-26 121.3 163 42.9
HanXRQChr15g0470241 Helianthus annuus HOM05D003761 ORTHO05D004412 1.0e-25 120.9 136 43.4
CsaV3_1G015780 Cucumis sativus L. HOM05D003761 ORTHO05D004412 1.4e-25 120.6 179 34.1
CsaV3_UNG065500 Cucumis sativus L. HOM05D003761 ORTHO05D004412 1.4e-25 120.6 179 34.1
Lalb_Chr15g0088211 Lupinus albus HOM05D003761 ORTHO05D004412 1.4e-25 120.6 164 39.6
vmacro03611 Vaccinium macrocarpon HOM05D003761 ORTHO05D004412 1.4e-25 120.6 152 42.8
vmacro23224 Vaccinium macrocarpon HOM05D003761 ORTHO05D004412 1.4e-25 120.6 152 42.8
MD05G1360900 Malus domestica HOM05D003761 ORTHO05D004412 1.8e-25 120.2 167 37.7
Phvul.003G086700 Phaseolus vulgaris HOM05D003761 ORTHO05D004412 1.8e-25 120.2 171 40.9
DCAR_030834 Daucus carota HOM05D003761 ORTHO05D004412 2.3e-25 119.8 174 40.8
TWI38G2030 Tripterygium wilfordii HOM05D003761 ORTHO05D004412 2.3e-25 119.8 192 37.0
EL10Ac8g20260 Beta vulgaris HOM05D003761 ORTHO05D004412 5.2e-25 118.6 150 40.0
HPP92_024936 Vanilla planifolia HOM05D003761 ORTHO05D004412 5.2e-25 118.6 128 46.1
Eucgr.L00154 Eucalyptus grandis HOM05D003761 ORTHO05D004412 6.8e-25 118.2 165 37.0
A05p06360 Brassica napus HOM05D003761 ORTHO05D004412 8.9e-25 117.9 179 40.2
BraA05t19604Z Brassica rapa HOM05D003761 ORTHO05D004412 8.9e-25 117.9 179 40.2
MELO3C025526.2 Cucumis melo HOM05D003761 ORTHO05D004412 8.9e-25 117.9 179 33.0
HPP92_024932 Vanilla planifolia HOM05D003761 ORTHO05D004412 8.9e-25 117.9 128 45.3
BcaC02g07354 Brassica carinata HOM05D003761 ORTHO05D004412 1.2e-24 117.5 163 42.3
PSO541G3650 Papaver somniferum HOM05D003761 ORTHO05D004412 1.2e-24 117.5 159 44.7
Prupe.4G004300 Prunus persica HOM05D003761 ORTHO05D004412 1.2e-24 117.5 158 41.8
THA.LOC104806736 Tarenaya hassleriana HOM05D003761 ORTHO05D004412 1.2e-24 117.5 160 41.9
FvH4_3g00370 Fragaria vesca HOM05D003761 ORTHO05D004412 1.5e-24 117.1 141 41.8
BolC4t22355H Brassica oleracea HOM05D003761 ORTHO05D004412 2.0e-24 116.7 179 40.2
CARHR173680 Cardamine hirsuta HOM05D003761 ORTHO05D004412 2.0e-24 116.7 132 44.7
Lj6g0023004 Lotus japonicus HOM05D003761 ORTHO05D004412 2.0e-24 116.7 165 39.4
TPR.G5987 Trifolium pratense HOM05D003761 ORTHO05D004412 2.0e-24 116.7 164 40.9
BcaB02g09050 Brassica carinata HOM05D003761 ORTHO05D004412 2.6e-24 116.3 176 41.5
Thhalv10001056m.g Eutrema salsugineum HOM05D003761 ORTHO05D004412 2.6e-24 116.3 132 44.7
Thhalv10017342m.g Eutrema salsugineum HOM05D003761 ORTHO05D004412 2.6e-24 116.3 139 43.9
Actinidia02285 Actinidia chinensis HOM05D000829 ORTHO05D000690 3.4e-24 115.9 139 46.8
Aa31LG9G5380 Aethionema arabicum HOM05D003761 ORTHO05D004412 3.4e-24 115.9 172 40.1
BcaB06g29129 Brassica carinata HOM05D003761 ORTHO05D004412 3.4e-24 115.9 139 44.6
Sopen11g007440 Solanum pennellii HOM05D003761 ORTHO05D004412 3.4e-24 115.9 144 45.8
PGSC0003DMG400013298 Solanum tuberosum HOM05D003761 ORTHO05D004412 3.4e-24 115.9 145 46.2
PSO675G1588 Papaver somniferum HOM05D003761 ORTHO05D004412 4.4e-24 115.5 159 42.8
Carub.0004s2229 Capsella rubella HOM05D003761 ORTHO05D004412 5.8e-24 115.2 159 41.5
Eucgr.E03855 Eucalyptus grandis HOM05D003761 ORTHO05D004412 5.8e-24 115.2 133 42.9
FAN25G2178 Fragaria x ananassa HOM05D003761 ORTHO05D004412 5.8e-24 115.2 143 40.6
Lalb_Chr13g0304361 Lupinus albus HOM05D003761 ORTHO05D004412 5.8e-24 115.2 135 43.7
Solyc11g012705.2 Solanum lycopersicum HOM05D003761 ORTHO05D004412 5.8e-24 115.2 144 45.8
BraA04t18501Z Brassica rapa HOM05D003761 ORTHO05D004412 7.5e-24 114.8 143 42.7
CDE10G1059 Ceratophyllum demersum HOM05D003761 ORTHO05D004412 7.5e-24 114.8 132 43.2
Sp4g22430 Schrenkiella parvula HOM05D003761 ORTHO05D004412 7.5e-24 114.8 171 39.8
A04p30050 Brassica napus HOM05D003761 ORTHO05D004412 9.8e-24 114.4 143 42.7
Carub.0008s0015 Capsella rubella HOM05D003761 ORTHO05D004412 9.8e-24 114.4 132 43.2
Nitab4.5_0001198g0070 Nicotiana tabacum HOM05D003761 ORTHO05D004412 9.8e-24 114.4 135 46.7
Medtr4g133932 Medicago truncatula HOM05D003761 ORTHO05D004412 1.7e-23 113.6 209 35.4
ClCG01G010750 Citrullus lanatus HOM05D003761 ORTHO05D004412 2.2e-23 113.2 167 35.3
FAN21G2431 Fragaria x ananassa HOM05D003761 ORTHO05D004412 2.2e-23 113.2 143 40.6
Sp2g12340 Schrenkiella parvula HOM05D003761 ORTHO05D004412 2.2e-23 113.2 138 42.8
AL8G10320 Arabidopsis lyrata HOM05D003761 ORTHO05D004412 2.9e-23 112.8 162 38.9
BcaC06g31357 Brassica carinata HOM05D003761 ORTHO05D004412 2.9e-23 112.8 162 41.4
A06p44900 Brassica napus HOM05D003761 ORTHO05D004412 2.9e-23 112.8 157 42.7
BraA06t27361Z Brassica rapa HOM05D003761 ORTHO05D004412 2.9e-23 112.8 157 42.7
AT5G47635 Arabidopsis thaliana HOM05D003761 ORTHO05D004412 3.7e-23 112.5 159 40.3
C07p31280 Brassica napus HOM05D003761 ORTHO05D004412 4.9e-23 112.1 171 39.2
AT2G40113 Arabidopsis thaliana HOM05D003761 ORTHO05D004412 8.3e-23 111.3 159 41.5
BcaB02g09051 Brassica carinata HOM05D003761 ORTHO05D004412 8.3e-23 111.3 164 40.9
AL4G37770 Arabidopsis lyrata HOM05D003761 ORTHO05D004412 1.1e-22 110.9 162 39.5
BcaC04g21612 Brassica carinata HOM05D003761 ORTHO05D004412 1.1e-22 110.9 168 37.5
C09p29870 Brassica napus HOM05D003761 ORTHO05D004412 1.1e-22 110.9 168 37.5
CARHR223820 Cardamine hirsuta HOM05D003761 ORTHO05D004412 1.1e-22 110.9 159 39.0
CAN.G1156.14 Capsicum annuum HOM05D003761 ORTHO05D004412 1.4e-22 110.5 173 37.6
PGR004G2813 Punica granatum HOM05D003761 ORTHO05D004412 1.9e-22 110.2 184 39.1
Aa31LG2G12410 Aethionema arabicum HOM05D003761 ORTHO05D004412 2.4e-22 109.8 160 39.4
TWI38G1412 Tripterygium wilfordii HOM05D003761 ORTHO05D004412 2.4e-22 109.8 204 35.3
AT4G17215 Arabidopsis thaliana HOM05D003761 ORTHO05D004412 3.2e-22 109.4 158 36.1
A09p23140 Brassica napus HOM05D003761 ORTHO05D004412 5.4e-22 108.6 158 40.5
BraA09t37917Z Brassica rapa HOM05D003761 ORTHO05D004412 5.4e-22 108.6 158 40.5
Carub.0007s2420 Capsella rubella HOM05D003761 ORTHO05D004412 5.4e-22 108.6 158 35.4
BcaB07g30768 Brassica carinata HOM05D003761 ORTHO05D004412 9.2e-22 107.8 132 41.7
Peaxi162Scf00442g00073 Petunia axillaris HOM05D003761 ORTHO05D004412 1.2e-21 107.5 136 48.5
CARHR135090 Cardamine hirsuta HOM05D003761 ORTHO05D004412 1.6e-21 107.1 133 41.4
Hma1.2p1_1175F.1_g263980 Hydrangea macrophylla HOM05D003761 ORTHO05D004412 2.0e-21 106.7 91 57.1
Aa31LG5G19480 Aethionema arabicum HOM05D003761 ORTHO05D004412 3.5e-21 105.9 133 42.9
BolC7t43669H Brassica oleracea HOM05D003761 ORTHO05D004412 4.6e-21 105.5 168 38.1
AL7G37500 Arabidopsis lyrata HOM05D003761 ORTHO05D004412 7.8e-21 104.8 158 34.8
BcaC09g50449 Brassica carinata HOM05D003761 ORTHO05D004412 1.7e-20 103.6 158 38.0
C01p25300 Brassica napus HOM05D003761 ORTHO05D004412 1.7e-20 103.6 158 38.0
BolC1t02480H Brassica oleracea HOM05D003761 ORTHO05D004412 1.7e-20 103.6 158 38.0
Thhalv10026465m.g Eutrema salsugineum HOM05D003761 ORTHO05D004412 1.7e-20 103.6 155 36.1
Os10g0208600 Oryza sativa ssp. japonica HOM05D003761 ORTHO05D004412 2.3e-20 103.2 133 48.9
THA.LOC104798379 Tarenaya hassleriana HOM05D003761 ORTHO05D004412 8.6e-20 101.3 127 44.9
Ah.09g233900 Amaranthus hybridus HOM05D003761 ORTHO05D004412 2.5e-19 99.8 135 40.7
BcaNung03474 Brassica carinata HOM05D003761 ORTHO05D004412 2.5e-19 99.8 155 37.4
A03p50350 Brassica napus HOM05D003761 ORTHO05D004412 2.5e-19 99.8 155 36.1
BraA03t14124Z Brassica rapa HOM05D003761 ORTHO05D004412 2.5e-19 99.8 162 35.8
Sp7g16980 Schrenkiella parvula HOM05D003761 ORTHO05D004412 5.6e-19 98.6 158 35.4
BcaC06g33549 Brassica carinata HOM05D003761 ORTHO05D004412 9.5e-19 97.8 155 36.1
C07p48660 Brassica napus HOM05D003761 ORTHO05D004412 9.5e-19 97.8 155 36.1
BolC7t45373H Brassica oleracea HOM05D003761 ORTHO05D004412 9.5e-19 97.8 155 36.1
BcaNung03472 Brassica carinata HOM05D003761 ORTHO05D004412 2.1e-18 96.7 156 36.5
BcaC06g34236 Brassica carinata HOM05D003761 ORTHO05D004412 8.1e-18 94.7 174 35.1
Os10g0206500 Oryza sativa ssp. japonica HOM05D003761 ORTHO05D004412 4.0e-17 92.4 167 35.9
BraA01t01941Z Brassica rapa HOM05D003761 ORTHO05D004412 5.2e-17 92.0 139 36.0
ATR0827G170 Amborella trichopoda HOM05D003761 ORTHO05D004412 4.4e-16 89.0 111 43.2
Zm00001eb050510 Zea mays HOM05D003761 ORTHO05D004412 4.4e-16 89.0 140 37.9
Sc05g0009870 Simmondsia chinensis HOM05D003761 ORTHO05D004412 9.8e-16 87.8 99 47.5
BcaNung00112 Brassica carinata HOM05D003761 ORTHO05D004412 1.3e-15 87.4 146 34.9
Cpa.g.sc27.234 Carica papaya HOM05D003761 ORTHO05D004412 4.9e-15 85.5 90 41.1
BolC9t55850H Brassica oleracea HOM05D003761 ORTHO05D004412 2.7e-13 79.7 93 43.0
C04p67800 Brassica napus HOM05D003761 ORTHO05D004412 1.3e-12 77.4 79 46.8
SEGI_00399 Sequoiadendron giganteum HOM05D003328 ORTHO05D003722 7.6e-08 61.6 119 33.6
SEGI_28043 Sequoiadendron giganteum HOM05D003761 ORTHO05D004412 8.4e-07 58.2 148 26.4


User provided reference genes

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