Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu025845.1 Olea europaea HOM05D008367 ORTHO05D010529 1.1e-99 366.7 189 100.0
Cc01_g18350 Coffea canephora HOM05D008367 ORTHO05D010529 1.8e-25 120.2 204 43.6
Migut.N02203 Erythranthe guttata HOM05D008367 ORTHO05D010529 1.6e-23 113.6 204 44.1
Hma1.2p1_0576F.1_g182070 Hydrangea macrophylla HOM05D008367 ORTHO05D010529 1.5e-21 107.1 197 41.6
Nitab4.5_0000470g0140 Nicotiana tabacum HOM05D008367 ORTHO05D010529 9.9e-21 104.4 208 38.9
Hma1.2p1_0273F.1_g109700 Hydrangea macrophylla HOM05D008367 ORTHO05D010529 6.4e-20 101.7 198 38.9
RcHm_v2.0_Chr6g0288121 Rosa chinensis HOM05D008367 ORTHO05D010529 3.2e-19 99.4 190 40.5
Actinidia09550 Actinidia chinensis HOM05D008367 ORTHO05D010529 9.3e-19 97.8 195 41.5
QL09p038772 Quercus lobata HOM05D008367 ORTHO05D010529 1.2e-18 97.4 196 38.8
SGA_v2.0_scaffold80G25773 Striga asiatica HOM05D008367 ORTHO05D010529 1.6e-18 97.1 200 39.0
FAN27G3501 Fragaria x ananassa HOM05D004208 ORTHO05D005156 2.1e-18 96.7 194 39.2
Actinidia25788 Actinidia chinensis HOM05D008367 ORTHO05D010529 1.0e-17 94.4 192 42.2
Ciclev10022407m.g Citrus clementina HOM05D008367 ORTHO05D010529 1.0e-17 94.4 202 39.6
Rhsim01G0263900 Rhododendron simsii HOM05D008367 ORTHO05D010529 1.3e-17 94.0 210 36.2
CAN.G896.7 Capsicum annuum HOM05D008367 ORTHO05D010529 1.8e-17 93.6 197 37.6
FvH4_2g21490 Fragaria vesca HOM05D008367 ORTHO05D010529 5.1e-17 92.0 188 38.8
FAN20G2986 Fragaria x ananassa HOM05D004208 ORTHO05D005156 4.3e-16 89.0 189 37.0
Potri.005G224200 Populus trichocarpa HOM05D008367 ORTHO05D010529 1.6e-15 87.0 200 38.0
Haze_24631 Corylus avellana HOM05D008367 ORTHO05D010529 6.2e-15 85.1 193 38.3
Glyma.19G164700 Glycine max HOM05D008367 ORTHO05D010529 6.2e-15 85.1 190 37.9
Potri.002G038400 Populus trichocarpa HOM05D008367 ORTHO05D010529 6.2e-15 85.1 195 36.9
Rhsim13G0035000 Rhododendron simsii HOM05D008367 ORTHO05D010529 1.1e-14 84.3 202 35.1
Glyma.03G163200 Glycine max HOM05D008367 ORTHO05D010529 1.4e-14 84.0 190 38.9
Duzib138G1787 Durio zibethinus HOM05D008367 ORTHO05D010529 1.8e-14 83.6 199 36.7
Phvul.001G161100 Phaseolus vulgaris HOM05D008367 ORTHO05D010529 1.8e-14 83.6 190 36.3
Medtr7g096950 Medicago truncatula HOM05D008367 ORTHO05D010529 3.1e-14 82.8 196 36.7
VMungo1383G3617 Vigna mungo HOM05D008367 ORTHO05D010529 3.1e-14 82.8 193 35.8
Manes.13G034100 Manihot esculenta HOM05D008367 ORTHO05D010529 9.0e-14 81.3 195 33.3
FAN24G2300 Fragaria x ananassa HOM05D004208 ORTHO05D005156 1.2e-13 80.9 176 36.4
Cpa.g.sc165.10 Carica papaya HOM05D008367 ORTHO05D010529 2.0e-13 80.1 192 37.0
Cfa002424 Carpinus fangiana HOM05D008367 ORTHO05D010529 2.6e-13 79.7 191 36.6
MD05G1197200 Malus domestica HOM05D008367 ORTHO05D010529 3.4e-13 79.3 200 37.0
CiPaw.03G264200 Carya illinoinensis HOM05D008367 ORTHO05D010529 7.6e-13 78.2 202 37.1
Gohir.D07G155080 Gossypium hirsutum HOM05D008367 ORTHO05D010529 4.9e-12 75.5 196 35.2
Gorai.001G177400 Gossypium raimondii HOM05D008367 ORTHO05D010529 4.9e-12 75.5 196 35.2
Ca_08676_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 8.4e-12 74.7 201 34.3
Dinv22407 Davidia involucrata HOM05D008367 ORTHO05D010529 8.4e-12 74.7 117 45.3
Psat3g056920 Pisum sativum HOM05D008367 ORTHO05D010529 8.4e-12 74.7 193 35.8
Duzib133G0413 Durio zibethinus HOM05D008367 ORTHO05D010529 1.1e-11 74.3 195 33.8
Sabra05G0173000 Salix brachista HOM05D008367 ORTHO05D010529 1.4e-11 73.9 195 34.9
Gohir.A07G148700 Gossypium hirsutum HOM05D008367 ORTHO05D010529 2.5e-11 73.2 198 34.3
PGSC0003DMG400010298 Solanum tuberosum HOM05D008367 ORTHO05D010529 2.1e-10 70.1 189 33.3
Sabra02G0030800 Salix brachista HOM05D008367 ORTHO05D010529 2.7e-10 69.7 201 33.3
Lj1g0003464 Lotus japonicus HOM05D008367 ORTHO05D010529 3.5e-10 69.3 200 33.5
Lsat_1_v5_gn_8_93101 Lactuca sativa HOM05D008367 ORTHO05D010529 4.6e-10 68.9 193 33.2
Atru.chr5.1688 Acer truncatum HOM05D008367 ORTHO05D010529 6.1e-10 68.6 193 34.2
Prupe.8G223700 Prunus persica HOM05D008367 ORTHO05D010529 6.1e-10 68.6 205 34.1
Sopen09g028370 Solanum pennellii HOM05D008367 ORTHO05D010529 7.9e-10 68.2 191 33.0
Ca_08702_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 1.8e-09 67.0 194 33.0
Ca_08710_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 2.3e-09 66.6 197 34.0
DCAR_007739 Daucus carota HOM05D008367 ORTHO05D010529 2.3e-09 66.6 116 40.5
COL.COLO4_05894 Corchorus olitorius HOM05D008367 ORTHO05D010529 3.9e-09 65.9 203 33.5
CANSAT01G1417 Cannabis sativa HOM05D008367 ORTHO05D010529 6.7e-09 65.1 202 31.7
Actinidia27694 Actinidia chinensis HOM05D008367 ORTHO05D010529 8.7e-09 64.7 179 33.0
Lalb_Chr01g0012251 Lupinus albus HOM05D008367 ORTHO05D010529 1.1e-08 64.3 179 34.1
Thecc.01G258200 Theobroma cacao HOM05D008367 ORTHO05D010529 1.6e-07 60.5 196 33.2
Rhsim13G0034900 Rhododendron simsii HOM05D009321 ORTHO05D010529 3.7e-07 59.3 97 41.2
ECA236G2746 Erigeron canadensis HOM05D008367 ORTHO05D010529 4.8e-07 58.9 188 32.4
Atru.chr4.2058 Acer truncatum HOM05D007526 ORTHO05D009350 4.1e-06 55.8 182 28.0
Eucgr.B01554 Eucalyptus grandis HOM05D008367 ORTHO05D010529 6.9e-06 55.1 185 32.4


User provided reference genes

Program Settings