Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu025739.1 Olea europaea HOM05D004016 ORTHO05D004732 8.2e-117 423.7 208 100.0
Oeu040656.1 Olea europaea HOM05D004016 ORTHO05D004732 3.8e-82 308.5 211 75.4
MSTRG.21548 Avicennia marina HOM05D004016 ORTHO05D004732 1.5e-62 243.4 211 63.0
Oeu013891.1 Olea europaea HOM05D004016 ORTHO05D004732 5.0e-58 228.4 168 69.0
Migut.D00318 Erythranthe guttata HOM05D004016 ORTHO05D004732 1.5e-57 226.9 210 62.4
MSTRG.18246 Avicennia marina HOM05D004016 ORTHO05D004732 1.2e-54 217.2 212 59.9
Dinv32914 Davidia involucrata HOM05D004016 ORTHO05D004732 1.2e-54 217.2 214 61.7
MSTRG.17454 Avicennia marina HOM05D004016 ORTHO05D004732 1.7e-53 213.4 210 60.5
Oeu028065.1 Olea europaea HOM05D004016 ORTHO05D004732 2.9e-53 212.6 222 59.0
Hma1.2p1_0822F.1_g224340 Hydrangea macrophylla HOM05D004016 ORTHO05D004732 2.0e-51 206.5 214 58.9
Hma1.2p1_0667F.1_g199710 Hydrangea macrophylla HOM05D004016 ORTHO05D004732 1.7e-50 203.4 215 55.8
Migut.N02038 Erythranthe guttata HOM05D004016 ORTHO05D004732 6.6e-50 201.4 211 56.9
Cc01_g19290 Coffea canephora HOM05D004016 ORTHO05D004732 7.3e-49 198.0 224 55.8
Lj2E1169T0 Lonicera japonica HOM05D004016 ORTHO05D004732 3.6e-48 195.7 220 54.1
Oeu034146.1 Olea europaea HOM05D004016 ORTHO05D004732 1.1e-47 194.1 179 60.3
PGSC0003DMG400019358 Solanum tuberosum HOM05D004016 ORTHO05D004732 2.3e-47 193.0 219 54.3
Solyc09g065380.2 Solanum lycopersicum HOM05D004016 ORTHO05D004732 3.1e-47 192.6 219 54.8
Sopen09g027150 Solanum pennellii HOM05D004016 ORTHO05D004732 2.6e-46 189.5 219 54.3
FAN24G3262 Fragaria x ananassa HOM05D004016 ORTHO05D004732 4.4e-46 188.7 220 50.9
FvH4_2g23281 Fragaria vesca HOM05D004016 ORTHO05D004732 9.8e-46 187.6 214 52.8
Manes.05G079900 Manihot esculenta HOM05D004016 ORTHO05D004732 4.9e-45 185.3 219 54.3
Actinidia21126 Actinidia chinensis HOM05D004016 ORTHO05D004732 8.3e-45 184.5 215 57.2
ClCG07G000350 Citrullus lanatus HOM05D004016 ORTHO05D004732 4.1e-44 182.2 213 52.1
FAN20G3152 Fragaria x ananassa HOM05D004016 ORTHO05D004732 5.4e-44 181.8 218 51.8
Haze_04687 Corylus avellana HOM05D004016 ORTHO05D004732 7.0e-44 181.4 214 54.2
Duzib138G0182 Durio zibethinus HOM05D004016 ORTHO05D004732 2.7e-43 179.5 221 53.8
Cfa006163 Carpinus fangiana HOM05D004016 ORTHO05D004732 3.5e-43 179.1 213 53.1
Gohir.A08G065500 Gossypium hirsutum HOM05D004016 ORTHO05D004732 3.5e-43 179.1 217 55.8
Manes.01G206100 Manihot esculenta HOM05D004016 ORTHO05D004732 3.5e-43 179.1 220 52.3
Ciclev10022155m.g Citrus clementina HOM05D004016 ORTHO05D004732 4.6e-43 178.7 224 52.7
COL.COLO4_09066 Corchorus olitorius HOM05D004016 ORTHO05D004732 6.0e-43 178.3 226 52.2
Peaxi162Scf00783g00017 Petunia axillaris HOM05D004016 ORTHO05D004732 6.0e-43 178.3 222 50.5
Cpa.g.sc487.4 Carica papaya HOM05D004016 ORTHO05D004732 1.0e-42 177.6 221 52.0
MD03G1262100 Malus domestica HOM05D004016 ORTHO05D004732 1.3e-42 177.2 215 50.2
vmacro14911 Vaccinium macrocarpon HOM05D004016 ORTHO05D004732 2.3e-42 176.4 216 54.2
Ca_09744_v3 Cicer arietinum L. HOM05D004016 ORTHO05D004732 3.0e-42 176.0 213 53.1
MD11G1282800 Malus domestica HOM05D004016 ORTHO05D004732 5.1e-42 175.3 215 49.8
Prupe.8G238400 Prunus persica HOM05D004016 ORTHO05D004732 5.1e-42 175.3 217 50.7
Gorai.004G078400 Gossypium raimondii HOM05D004016 ORTHO05D004732 6.6e-42 174.9 215 54.9
Rhsim01G0273500 Rhododendron simsii HOM05D004016 ORTHO05D004732 6.6e-42 174.9 213 54.9
Thecc.01G275600 Theobroma cacao HOM05D004016 ORTHO05D004732 8.6e-42 174.5 227 52.4
Ah.02g110900 Amaranthus hybridus HOM05D004016 ORTHO05D004732 1.1e-41 174.1 216 52.8
MELO3C014394.2 Cucumis melo HOM05D004016 ORTHO05D004732 1.1e-41 174.1 214 50.0
Gohir.D08G074000 Gossypium hirsutum HOM05D004016 ORTHO05D004732 1.1e-41 174.1 215 54.9
Potri.002G050900 Populus trichocarpa HOM05D004016 ORTHO05D004732 1.1e-41 174.1 226 52.2
Potri.005G211400 Populus trichocarpa HOM05D004016 ORTHO05D004732 1.5e-41 173.7 224 53.6
FAN15G1959 Fragaria x ananassa HOM05D004016 ORTHO05D004732 1.9e-41 173.3 217 50.7
Sed0007164 Sechium edule HOM05D004016 ORTHO05D004732 3.3e-41 172.6 216 51.4
SGA_v2.0_scaffold1G00497 Striga asiatica HOM05D004016 ORTHO05D004732 3.3e-41 172.6 245 47.8
FAN27G2694 Fragaria x ananassa HOM05D004016 ORTHO05D004732 7.3e-41 171.4 217 50.2
Nitab4.5_0002928g0010 Nicotiana tabacum HOM05D004016 ORTHO05D004732 9.5e-41 171.0 209 50.7
Sabra02G0041700 Salix brachista HOM05D004016 ORTHO05D004732 9.5e-41 171.0 224 51.8
EL10Ac5g10544 Beta vulgaris HOM05D004016 ORTHO05D004732 1.6e-40 170.2 213 51.6
CAN.G1549.22 Capsicum annuum HOM05D004016 ORTHO05D004732 1.6e-40 170.2 218 48.6
CsaV3_6G037200 Cucumis sativus L. HOM05D004016 ORTHO05D004732 2.8e-40 169.5 214 49.1
CAN.G1549.11 Capsicum annuum HOM05D004016 ORTHO05D004732 6.2e-40 168.3 218 48.2
TAR636G0684 Trochodendron aralioides HOM05D004016 ORTHO05D004732 6.2e-40 168.3 209 50.2
Atru.chr5.1471 Acer truncatum HOM05D004016 ORTHO05D004732 1.1e-39 167.5 229 52.0
Sc05g0001440 Simmondsia chinensis HOM05D004016 ORTHO05D004732 1.1e-39 167.5 210 52.4
RcHm_v2.0_Chr6g0290651 Rosa chinensis HOM05D004016 ORTHO05D004732 1.4e-39 167.2 227 47.1
Duzib133G1129 Durio zibethinus HOM05D004016 ORTHO05D004732 1.8e-39 166.8 216 52.3
AUR62028601 Chenopodium quinoa HOM05D004016 ORTHO05D004732 2.3e-39 166.4 213 51.6
Lj1C48T4 Lonicera japonica HOM05D004016 ORTHO05D004732 3.1e-39 166.0 210 53.3
CAN.G1549.21 Capsicum annuum HOM05D004016 ORTHO05D004732 5.2e-39 165.2 218 47.7
SGA_v2.0_scaffold138G35322 Striga asiatica HOM05D004016 ORTHO05D004732 6.8e-39 164.9 192 53.6
Sabra05G0161500 Salix brachista HOM05D004016 ORTHO05D004732 7.5e-38 161.4 219 51.6
HanXRQChr04g0118991 Helianthus annuus HOM05D004016 ORTHO05D004732 9.9e-38 161.0 224 48.2
Gohir.A08G186500 Gossypium hirsutum HOM05D004016 ORTHO05D004732 2.2e-37 159.8 214 51.9
Peaxi162Scf01248g00010 Petunia axillaris HOM05D004016 ORTHO05D004732 2.9e-37 159.5 210 50.5
Gohir.D08G204600 Gossypium hirsutum HOM05D004016 ORTHO05D004732 6.4e-37 158.3 216 52.3
Lalb_Chr02g0142631 Lupinus albus HOM05D004016 ORTHO05D004732 6.4e-37 158.3 209 50.7
arahy.Tifrunner.gnm1.ann1.256EAD Arachis hypogaea HOM05D004016 ORTHO05D004732 8.3e-37 157.9 215 46.5
Gorai.004G216600 Gossypium raimondii HOM05D004016 ORTHO05D004732 8.3e-37 157.9 215 52.1
TAR633G2817 Trochodendron aralioides HOM05D004016 ORTHO05D004732 8.3e-37 157.9 211 50.7
Lsat_1_v5_gn_8_56660 Lactuca sativa HOM05D004016 ORTHO05D004732 1.1e-36 157.5 227 47.6
TWI18G0383 Tripterygium wilfordii HOM05D004016 ORTHO05D004732 1.1e-36 157.5 218 50.5
THA.LOC104801244 Tarenaya hassleriana HOM05D004016 ORTHO05D004732 1.4e-36 157.1 217 46.5
Lalb_Chr21g0306401 Lupinus albus HOM05D004016 ORTHO05D004732 1.9e-36 156.8 211 50.2
Sopen06g035580 Solanum pennellii HOM05D004016 ORTHO05D004732 1.9e-36 156.8 218 46.8
Nitab4.5_0008064g0020 Nicotiana tabacum HOM05D004016 ORTHO05D004732 3.2e-36 156.0 216 50.0
Solyc06g084200.2 Solanum lycopersicum HOM05D004016 ORTHO05D004732 5.4e-36 155.2 215 47.0
Nitab4.5_0005172g0030 Nicotiana tabacum HOM05D004016 ORTHO05D004732 2.7e-35 152.9 218 49.5
PGSC0003DMG400020056 Solanum tuberosum HOM05D004016 ORTHO05D004732 1.0e-34 151.0 218 45.9
Ca_08613_v3 Cicer arietinum L. HOM05D004016 ORTHO05D004732 1.3e-34 150.6 217 48.4
Lj1g0004863 Lotus japonicus HOM05D004016 ORTHO05D004732 1.7e-34 150.2 214 45.3
LjContig00056g0010505 Lotus japonicus HOM05D004016 ORTHO05D004732 1.7e-34 150.2 214 45.3
Lalb_Chr06g0162891 Lupinus albus HOM05D004016 ORTHO05D004732 1.7e-34 150.2 209 46.9
THA.LOC104825992 Tarenaya hassleriana HOM05D004016 ORTHO05D004732 5.1e-34 148.7 224 46.4
Phvul.001G153100 Phaseolus vulgaris HOM05D004016 ORTHO05D004732 1.5e-33 147.1 208 46.6
Hund02825 Selenicereus undatus HOM05D004016 ORTHO05D004732 1.9e-33 146.7 219 47.9
vmacro02591 Vaccinium macrocarpon HOM05D004016 ORTHO05D004732 4.3e-33 145.6 172 53.5
Sc17g0001350 Simmondsia chinensis HOM05D004016 ORTHO05D004732 7.3e-33 144.8 209 48.8
Gohir.A11G124100 Gossypium hirsutum HOM05D004016 ORTHO05D004732 9.5e-33 144.4 213 46.9
Gorai.007G138300 Gossypium raimondii HOM05D004016 ORTHO05D004732 2.1e-32 143.3 212 48.1
TWI12G1445 Tripterygium wilfordii HOM05D004016 ORTHO05D004732 2.1e-32 143.3 214 48.1
Hund27940 Selenicereus undatus HOM05D004016 ORTHO05D004732 3.6e-32 142.5 217 47.5
Lj5g0005099 Lotus japonicus HOM05D004016 ORTHO05D004732 4.7e-32 142.1 215 46.0
PGR044G0005 Punica granatum HOM05D004016 ORTHO05D004732 4.7e-32 142.1 216 47.7
Psat3g063280 Pisum sativum HOM05D004016 ORTHO05D004732 8.1e-32 141.4 217 45.2
VMungo1383G1854 Vigna mungo HOM05D004016 ORTHO05D004732 8.1e-32 141.4 208 45.2
TPR.G27140 Trifolium pratense HOM05D004016 ORTHO05D004732 1.4e-31 140.6 213 45.5
Actinidia24906 Actinidia chinensis HOM05D004016 ORTHO05D004732 2.4e-31 139.8 158 54.4
CiPaw.08G107200 Carya illinoinensis HOM05D004016 ORTHO05D004732 3.1e-31 139.4 198 46.5
Glyma.19G157800 Glycine max HOM05D004016 ORTHO05D004732 3.1e-31 139.4 211 47.9
Phvul.007G173300 Phaseolus vulgaris HOM05D004016 ORTHO05D004732 5.2e-31 138.7 213 47.4
Glyma.03G155700 Glycine max HOM05D004016 ORTHO05D004732 1.2e-30 137.5 216 47.7
DCAR_002723 Daucus carota HOM05D004016 ORTHO05D004732 2.0e-30 136.7 227 44.9
Eucgr.H01463 Eucalyptus grandis HOM05D004016 ORTHO05D004732 2.0e-30 136.7 216 44.4
Gohir.D11G129300 Gossypium hirsutum HOM05D004016 ORTHO05D004732 2.0e-30 136.7 212 46.2
Aa31LG5G2350 Aethionema arabicum HOM05D004016 ORTHO05D004732 2.6e-30 136.3 214 44.4
Rhsim13G0026600 Rhododendron simsii HOM05D004016 ORTHO05D004732 5.8e-30 135.2 214 43.0
Glyma.10G027800 Glycine max HOM05D004016 ORTHO05D004732 9.9e-30 134.4 219 47.5
Aqoxy5G00450 Aquilegia oxysepala HOM05D004016 ORTHO05D004732 1.7e-29 133.7 219 47.0
Glyma.02G146200 Glycine max HOM05D004016 ORTHO05D004732 6.4e-29 131.7 218 47.2
ECA236G1435 Erigeron canadensis HOM05D004016 ORTHO05D004732 1.1e-28 131.0 220 44.1
Nitab4.5_0009529g0030 Nicotiana tabacum HOM05D004016 ORTHO05D004732 2.4e-28 129.8 182 49.5
AT4G02715 Arabidopsis thaliana HOM05D004016 ORTHO05D004732 3.2e-28 129.4 211 41.7
CARHR251020 Cardamine hirsuta HOM05D004016 ORTHO05D004732 4.2e-28 129.0 211 41.2
Thhalv10028968m.g Eutrema salsugineum HOM05D004016 ORTHO05D004732 2.1e-27 126.7 213 41.8
Sp6g02620 Schrenkiella parvula HOM05D004016 ORTHO05D004732 3.5e-27 125.9 214 41.6
ClCG09G007200 Citrullus lanatus HOM05D004016 ORTHO05D004732 4.6e-27 125.6 210 43.8
Medtr7g095160 Medicago truncatula HOM05D004016 ORTHO05D004732 4.6e-27 125.6 218 43.1
VMungo0720G0880 Vigna mungo HOM05D004016 ORTHO05D004732 1.3e-26 124.0 198 46.0
AL6G50300 Arabidopsis lyrata HOM05D004016 ORTHO05D004732 2.3e-26 123.2 211 40.8
DCAR_018429 Daucus carota HOM05D004016 ORTHO05D004732 3.0e-26 122.9 253 39.9
QL12p021105 Quercus lobata HOM05D004016 ORTHO05D004732 3.9e-26 122.5 233 42.1
Carub.0006s3440 Capsella rubella HOM05D004016 ORTHO05D004732 5.1e-26 122.1 211 40.3
Psat6g059840 Pisum sativum HOM05D004016 ORTHO05D004732 1.1e-25 120.9 197 44.7
HPP92_013967 Vanilla planifolia HOM05D004016 ORTHO05D004732 2.5e-25 119.8 209 44.5
PSO761G0274 Papaver somniferum HOM05D004016 ORTHO05D004732 4.3e-25 119.0 220 45.0
TPR.G24294 Trifolium pratense HOM05D004016 ORTHO05D004732 4.3e-25 119.0 216 39.4
BcaB01g02015 Brassica carinata HOM05D004016 ORTHO05D004732 5.6e-25 118.6 213 42.7
Medtr1g071810 Medicago truncatula HOM05D004016 ORTHO05D004732 1.6e-24 117.1 89 68.5
unitig_0.g129 Utricularia gibba HOM05D004016 ORTHO05D004732 2.8e-24 116.3 151 49.0
BcaB05g23659 Brassica carinata HOM05D004016 ORTHO05D004732 3.6e-24 115.9 216 41.2
C09p02200 Brassica napus HOM05D004016 ORTHO05D004732 6.2e-24 115.2 206 39.8
Aqoxy2G03410 Aquilegia oxysepala HOM05D004016 ORTHO05D004732 8.1e-24 114.8 205 45.4
BcaC04g24008 Brassica carinata HOM05D004016 ORTHO05D004732 2.4e-23 113.2 208 39.4
BolC9t53149H Brassica oleracea HOM05D004016 ORTHO05D004732 2.4e-23 113.2 208 39.4
PSO210G5515 Papaver somniferum HOM05D004016 ORTHO05D004732 1.7e-21 107.1 220 40.9
A09p02110 Brassica napus HOM05D004016 ORTHO05D004732 6.4e-21 105.1 206 37.4
BraA09t35860Z Brassica rapa HOM05D004016 ORTHO05D004732 6.4e-21 105.1 206 37.4
ATR0697G155 Amborella trichopoda HOM05D004016 ORTHO05D004732 1.1e-20 104.4 149 45.6
CsaV3_7G027970 Cucumis sativus L. HOM05D004016 ORTHO05D004732 9.3e-20 101.3 129 51.2
BcaC03g16166 Brassica carinata HOM05D004016 ORTHO05D004732 4.6e-19 99.0 204 37.7
C02p39140 Brassica napus HOM05D004016 ORTHO05D004732 1.3e-18 97.4 207 37.2
Zm00001eb403300 Zea mays HOM05D004016 ORTHO05D004732 1.3e-18 97.4 217 40.1
MELO3C015815.2 Cucumis melo HOM05D004016 ORTHO05D004732 1.7e-18 97.1 142 46.5
Os03g0160200 Oryza sativa ssp. japonica HOM05D004016 ORTHO05D004732 2.3e-18 96.7 208 38.0
ECA247G1708 Erigeron canadensis HOM05D004016 ORTHO05D004732 5.1e-18 95.5 183 38.3
Psat1g067520 Pisum sativum HOM05D004016 ORTHO05D004732 1.5e-17 94.0 164 42.1
BolC2t09924H Brassica oleracea HOM05D004016 ORTHO05D004732 8.1e-16 88.2 202 35.6
Sed0001131 Sechium edule HOM05D004016 ORTHO05D004732 2.6e-14 83.2 214 37.4
Gorai.009G456000 Gossypium raimondii HOM05D004016 ORTHO05D004732 1.3e-13 80.9 132 47.7
A03p30890 Brassica napus HOM05D004016 ORTHO05D004732 1.1e-12 77.8 86 51.2
Zm00001eb047890 Zea mays HOM05D004016 ORTHO05D004732 3.2e-12 76.3 158 36.1
A02p24930 Brassica napus HOM05D004016 ORTHO05D004732 4.6e-11 72.4 78 56.4
BraA02t07483Z Brassica rapa HOM05D004016 ORTHO05D004732 4.6e-11 72.4 78 56.4
SEGI_39625 Sequoiadendron giganteum HOM05D004016 ORTHO05D004732 1.5e-09 67.4 102 42.2
BcaC01g06736 Brassica carinata HOM05D002144 ORTHO05D002170 4.3e-09 65.9 87 49.4
Mapoly0128s0012 Marchantia polymorpha HOM05D004016 ORTHO05D004732 1.3e-08 64.3 96 49.0
GSVIVG01001172001 Vitis vinifera HOM05D004016 ORTHO05D004732 1.8e-07 60.5 67 50.7
SEGI_04941 Sequoiadendron giganteum HOM05D004016 ORTHO05D004732 2.4e-07 60.1 83 43.4
SMO134G0037 Selaginella moellendorffii HOM05D004016 ORTHO05D004732 2.6e-06 56.6 87 47.1
SMO347G0037 Selaginella moellendorffii HOM05D004016 ORTHO05D004732 9.9e-06 54.7 85 38.8


User provided reference genes

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