Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu025680.1 Olea europaea HOM05D004004 ORTHO05D003284 1.7e-88 329.3 173 100.0
Oeu000178.1 Olea europaea HOM05D004004 ORTHO05D003284 1.3e-27 127.1 113 58.4
Migut.N00981 Erythranthe guttata HOM05D004004 ORTHO05D003284 1.8e-24 116.7 115 63.5
GSVIVG01036224001 Vitis vinifera HOM05D004004 ORTHO05D003284 1.1e-21 107.5 114 54.4
Prupe.8G018500 Prunus persica HOM05D004004 ORTHO05D003284 1.8e-21 106.7 114 50.9
TAR633G0312 Trochodendron aralioides HOM05D004004 ORTHO05D003284 1.8e-21 106.7 118 52.5
Actinidia22847 Actinidia chinensis HOM05D004004 ORTHO05D003284 5.3e-21 105.1 114 52.6
MBI18_g28922_MAGBIO Magnolia biondii HOM05D004004 ORTHO05D003284 1.2e-20 104.0 113 49.6
Atru.chr12.1510 Acer truncatum HOM05D004004 ORTHO05D003284 2.0e-20 103.2 115 48.7
CSS0023371 Camellia sinensis var. sinensis HOM05D004004 ORTHO05D003284 1.3e-19 100.5 116 48.3
Dinv42931 Davidia involucrata HOM05D004004 ORTHO05D003284 1.3e-19 100.5 118 55.9
Dinv43169 Davidia involucrata HOM05D004004 ORTHO05D003284 1.3e-19 100.5 118 55.9
FvH4_2g14740 Fragaria vesca HOM05D004004 ORTHO05D003284 1.3e-19 100.5 116 50.9
Actinidia01655 Actinidia chinensis HOM05D004004 ORTHO05D003284 1.7e-19 100.1 119 49.6
Actinidia38530 Actinidia chinensis HOM05D004004 ORTHO05D003284 2.9e-19 99.4 98 55.1
FvH4_2g14710 Fragaria vesca HOM05D004004 ORTHO05D003284 2.9e-19 99.4 102 52.0
FAN15G2223 Fragaria x ananassa HOM05D004004 ORTHO05D003284 2.9e-19 99.4 102 52.0
FAN24G1883 Fragaria x ananassa HOM05D004004 ORTHO05D003284 2.9e-19 99.4 102 52.0
QL03p011303 Quercus lobata HOM05D004004 ORTHO05D003284 3.8e-19 99.0 121 43.8
MBI18_g28925_MAGBIO Magnolia biondii HOM05D004004 ORTHO05D003284 1.1e-18 97.4 117 47.0
Potri.018G148900 Populus trichocarpa HOM05D004004 ORTHO05D003284 1.5e-18 97.1 116 46.6
CDE08G1315 Ceratophyllum demersum HOM05D004004 ORTHO05D003284 7.2e-18 94.7 117 46.2
Nn1g09210 Nelumbo nucifera HOM05D004004 ORTHO05D003284 2.7e-17 92.8 118 50.0
Dinv42932 Davidia involucrata HOM05D004004 ORTHO05D003284 4.7e-17 92.0 120 51.7
Dinv43168 Davidia involucrata HOM05D004004 ORTHO05D003284 4.7e-17 92.0 120 51.7
CDE06G2437 Ceratophyllum demersum HOM05D004004 ORTHO05D003284 1.0e-16 90.9 113 42.5
CDE06G0974 Ceratophyllum demersum HOM05D004004 ORTHO05D003284 1.4e-16 90.5 112 42.9
CANSAT80G0904 Cannabis sativa HOM05D004004 ORTHO05D003284 3.0e-16 89.4 114 48.2
TWI12G0300 Tripterygium wilfordii HOM05D000607 ORTHO05D003284 6.8e-16 88.2 116 47.4
CDE06G0543 Ceratophyllum demersum HOM05D004004 ORTHO05D003284 1.2e-15 87.4 120 40.0
PGR031G3823 Punica granatum HOM05D004004 ORTHO05D003284 1.7e-14 83.6 115 42.6
Potri.006G079400 Populus trichocarpa HOM05D004004 ORTHO05D003284 2.8e-14 82.8 118 41.5
Manes.13G076069 Manihot esculenta HOM05D004004 ORTHO05D003284 6.3e-14 81.6 107 46.7
HanXRQChr09g0250531 Helianthus annuus HOM05D004004 ORTHO05D003284 8.3e-14 81.3 92 45.7
THA.LOC104818765 Tarenaya hassleriana HOM05D008255 ORTHO05D003284 1.4e-13 80.5 119 47.9
C07p41630 Brassica napus HOM05D008255 ORTHO05D011943 2.7e-12 76.3 127 33.9
BolC7t44697H Brassica oleracea HOM05D008255 ORTHO05D003284 2.7e-12 76.3 119 35.3
AT5G26690 Arabidopsis thaliana HOM05D008255 ORTHO05D003284 4.5e-12 75.5 75 49.3
SalBow5G1136 Salvia bowleyana HOM05D004004 ORTHO05D003284 4.5e-12 75.5 73 49.3
Sp3g04810 Schrenkiella parvula HOM05D008255 ORTHO05D003284 4.5e-12 75.5 120 39.2
Sopen02g029610 Solanum pennellii HOM05D004004 ORTHO05D003284 5.9e-12 75.1 134 38.1
AL6G38500 Arabidopsis lyrata HOM05D008255 ORTHO05D003284 1.0e-11 74.3 74 50.0
CARHR186920 Cardamine hirsuta HOM05D008255 ORTHO05D003284 1.0e-11 74.3 114 45.6
HanXRQChr09g0250491 Helianthus annuus HOM05D000607 ORTHO05D003284 1.0e-11 74.3 76 48.7
Rhsim05G0125300 Rhododendron simsii HOM05D004004 ORTHO05D003284 1.0e-11 74.3 74 48.6
Cfa006895 Carpinus fangiana HOM05D004004 ORTHO05D003284 1.3e-11 73.9 121 38.8
Nitab4.5_0005980g0010 Nicotiana tabacum HOM05D004004 ORTHO05D003284 2.2e-11 73.2 135 35.6
Carub.0006s2427 Capsella rubella HOM05D008255 ORTHO05D003284 2.9e-11 72.8 113 37.2
BcaB07g29967 Brassica carinata HOM05D008255 ORTHO05D003284 3.8e-11 72.4 74 44.6
HanXRQChr09g0250511 Helianthus annuus HOM05D004004 ORTHO05D003284 3.8e-11 72.4 117 40.2
Hund13999 Selenicereus undatus HOM05D004004 ORTHO05D003284 5.0e-11 72.0 74 45.9
Thhalv10005163m.g Eutrema salsugineum HOM05D008255 ORTHO05D003284 6.5e-11 71.6 113 43.4
FAN19G2260 Fragaria x ananassa HOM05D004674 ORTHO05D007261 6.5e-11 71.6 73 49.3
FAN23G2735 Fragaria x ananassa HOM05D004004 ORTHO05D003284 6.5e-11 71.6 73 49.3
Lj2g0016762 Lotus japonicus HOM05D004004 ORTHO05D003284 6.5e-11 71.6 73 46.6
Nn3g19202 Nelumbo nucifera HOM05D008255 ORTHO05D003284 6.5e-11 71.6 116 40.5
Aa31LG5G16330 Aethionema arabicum HOM05D008255 ORTHO05D003284 8.5e-11 71.2 137 34.3
BcaC03g17875 Brassica carinata HOM05D008255 ORTHO05D003284 8.5e-11 71.2 95 37.9
Eucgr.I02406 Eucalyptus grandis HOM05D004004 ORTHO05D003284 8.5e-11 71.2 70 48.6
FAN28G2460 Fragaria x ananassa HOM05D004004 ORTHO05D003284 8.5e-11 71.2 73 49.3
Nitab4.5_0003001g0020 Nicotiana tabacum HOM05D004004 ORTHO05D003284 8.5e-11 71.2 131 37.4
RcHm_v2.0_Chr2g0100871 Rosa chinensis HOM05D004004 ORTHO05D003284 8.5e-11 71.2 73 46.6
Zm00001eb432750 Zea mays HOM05D004004 ORTHO05D003284 8.5e-11 71.2 75 49.3
A02p39410 Brassica napus HOM05D008255 ORTHO05D003284 1.1e-10 70.9 123 34.1
FvH4_1g12761 Fragaria vesca HOM05D004004 ORTHO05D003284 1.5e-10 70.5 73 47.9
CiPaw.07G049200 Carya illinoinensis HOM05D004004 ORTHO05D003284 1.9e-10 70.1 73 47.9
COL.COLO4_22030 Corchorus olitorius HOM05D004674 ORTHO05D007261 1.9e-10 70.1 73 47.9
TWI53G0327 Tripterygium wilfordii HOM05D004004 ORTHO05D003284 1.9e-10 70.1 73 46.6
FAN24G1167 Fragaria x ananassa HOM05D004004 ORTHO05D003284 2.5e-10 69.7 86 50.0
Potri.007G021200 Populus trichocarpa HOM05D004004 ORTHO05D003284 3.2e-10 69.3 73 45.2
CAN.G358.44 Capsicum annuum HOM05D004004 ORTHO05D003284 4.2e-10 68.9 70 45.7
Cpa.g.sc6.165 Carica papaya HOM05D004004 ORTHO05D003284 4.2e-10 68.9 70 50.0
Haze_03857 Corylus avellana HOM05D004004 ORTHO05D003284 4.2e-10 68.9 131 35.1
Dinv40018 Davidia involucrata HOM05D004004 ORTHO05D003284 4.2e-10 68.9 126 35.7
QL06p035435 Quercus lobata HOM05D004004 ORTHO05D003284 4.2e-10 68.9 73 45.2
SEGI_40269 Sequoiadendron giganteum HOM05D004004 ORTHO05D003284 4.2e-10 68.9 115 37.4
TAR381G1189 Trochodendron aralioides HOM05D004004 ORTHO05D003284 4.2e-10 68.9 139 34.5
CiPaw.08G139700 Carya illinoinensis HOM05D004004 ORTHO05D003284 5.5e-10 68.6 73 47.9
Haze_03875 Corylus avellana HOM05D004004 ORTHO05D003284 5.5e-10 68.6 131 35.1
MD02G1143000 Malus domestica HOM05D004004 ORTHO05D003284 5.5e-10 68.6 122 36.1
MD15G1256400 Malus domestica HOM05D004004 ORTHO05D003284 5.5e-10 68.6 73 47.9
Aa31LG11G10000 Aethionema arabicum HOM05D008255 ORTHO05D003284 7.2e-10 68.2 123 35.0
A06p36870 Brassica napus HOM05D008255 ORTHO05D003284 7.2e-10 68.2 95 36.8
AUR62015036 Chenopodium quinoa HOM05D004004 ORTHO05D003284 7.2e-10 68.2 123 38.2
MBI10_g00769_MAGBIO Magnolia biondii HOM05D004004 ORTHO05D003284 7.2e-10 68.2 136 35.3
Nn1g09207 Nelumbo nucifera HOM05D004004 ORTHO05D003284 7.2e-10 68.2 126 37.3
Peaxi162Scf00418g00071 Petunia axillaris HOM05D004004 ORTHO05D003284 7.2e-10 68.2 73 43.8
Medtr5g020960 Medicago truncatula HOM05D004004 ORTHO05D003284 9.4e-10 67.8 75 41.3
Aqoxy6G01170 Aquilegia oxysepala HOM05D004004 ORTHO05D003284 1.2e-09 67.4 140 32.1
BcaC09g47861 Brassica carinata HOM05D008255 ORTHO05D003284 1.2e-09 67.4 124 39.5
BolC2t11969H Brassica oleracea HOM05D008255 ORTHO05D003284 1.2e-09 67.4 87 39.1
BraA02t08910Z Brassica rapa HOM05D008255 ORTHO05D003284 1.6e-09 67.0 87 39.1
CSS0049012 Camellia sinensis var. sinensis HOM05D004004 ORTHO05D003284 1.6e-09 67.0 73 43.8
CANSAT01G1672 Cannabis sativa HOM05D004004 ORTHO05D003284 1.6e-09 67.0 73 43.8
FAN26G1971 Fragaria x ananassa HOM05D008813 ORTHO05D003284 1.6e-09 67.0 76 46.1
Phvul.002G033800 Phaseolus vulgaris HOM05D004004 ORTHO05D003284 1.6e-09 67.0 73 45.2
BolC1t05653H Brassica oleracea HOM05D008255 ORTHO05D003284 2.1e-09 66.6 130 37.7
Thhalv10021753m.g Eutrema salsugineum HOM05D008255 ORTHO05D003284 2.7e-09 66.2 73 43.8
Glyma.11G071500 Glycine max HOM05D004004 ORTHO05D003284 2.7e-09 66.2 73 43.8
Manes.01G138700 Manihot esculenta HOM05D004004 ORTHO05D003284 2.7e-09 66.2 133 37.6
Hund05396 Selenicereus undatus HOM05D004004 ORTHO05D003284 2.7e-09 66.2 145 33.1
C05p61350 Brassica napus HOM05D008255 ORTHO05D003284 3.6e-09 65.9 73 45.2
Prupe.7G158500 Prunus persica HOM05D004004 ORTHO05D003284 3.6e-09 65.9 73 45.2
Sabra07G0018100 Salix brachista HOM05D004004 ORTHO05D003284 3.6e-09 65.9 73 43.8
VMungo1215G3070 Vigna mungo HOM05D004004 ORTHO05D003284 3.6e-09 65.9 70 45.7
BraA06t26610Z Brassica rapa HOM05D008255 ORTHO05D011943 4.7e-09 65.5 117 33.3
AUR62031945 Chenopodium quinoa HOM05D004004 ORTHO05D003284 4.7e-09 65.5 116 37.1
AUR62033201 Chenopodium quinoa HOM05D004004 ORTHO05D003284 4.7e-09 65.5 118 34.7
CsaV3_6G046550 Cucumis sativus L. HOM05D004004 ORTHO05D003284 4.7e-09 65.5 77 42.9
Potri.005G120200 Populus trichocarpa HOM05D004004 ORTHO05D003284 4.7e-09 65.5 73 42.5
Carub.0003s0529 Capsella rubella HOM05D008255 ORTHO05D003284 6.1e-09 65.1 124 37.9
TPR.G2394 Trifolium pratense HOM05D004004 ORTHO05D003284 6.1e-09 65.1 73 39.7
BraA01t04464Z Brassica rapa HOM05D008255 ORTHO05D003284 8.0e-09 64.7 73 43.8
Duzib187G1158 Durio zibethinus HOM05D004004 ORTHO05D003284 8.0e-09 64.7 133 34.6
ECA238G0774 Erigeron canadensis HOM05D004004 ORTHO05D003284 8.0e-09 64.7 135 31.9
Nn5g29686 Nelumbo nucifera HOM05D004004 ORTHO05D003284 8.0e-09 64.7 72 43.1
Sed0026549 Sechium edule HOM05D004004 ORTHO05D003284 8.0e-09 64.7 76 44.7
Actinidia19203 Actinidia chinensis HOM05D004004 ORTHO05D003284 1.0e-08 64.3 69 44.9
Ah.11g050090 Amaranthus hybridus HOM05D004004 ORTHO05D003284 1.0e-08 64.3 126 34.9
AUR62022233 Chenopodium quinoa HOM05D004004 ORTHO05D003284 1.0e-08 64.3 135 35.6
DCAR_006593 Daucus carota HOM05D004004 ORTHO05D003284 1.0e-08 64.3 64 48.4
Duzib147G0117 Durio zibethinus HOM05D004004 ORTHO05D003284 1.0e-08 64.3 70 45.7
THA.LOC104820102 Tarenaya hassleriana HOM05D008255 ORTHO05D003284 1.0e-08 64.3 71 45.1
EL10As8g23910 Beta vulgaris HOM05D004004 ORTHO05D003284 1.4e-08 63.9 72 38.9
A05p42140 Brassica napus HOM05D008255 ORTHO05D003284 1.4e-08 63.9 72 44.4
Ciclev10027136m.g Citrus clementina HOM05D004004 ORTHO05D003284 1.4e-08 63.9 128 32.8
Hma1.2p1_0775F.1_g216490 Hydrangea macrophylla HOM05D004004 ORTHO05D003284 1.4e-08 63.9 112 34.8
PGR119G0576 Punica granatum HOM05D004004 ORTHO05D003284 1.4e-08 63.9 112 35.7
Rhsim06G0029400 Rhododendron simsii HOM05D004004 ORTHO05D003284 1.4e-08 63.9 95 34.7
Lsat_1_v5_gn_9_81441 Lactuca sativa HOM05D000607 ORTHO05D003284 1.8e-08 63.5 119 36.1
PGR119G0532 Punica granatum HOM05D004004 ORTHO05D003284 1.8e-08 63.5 73 42.5
AT3G05920 Arabidopsis thaliana HOM05D008255 ORTHO05D003284 2.3e-08 63.2 124 37.1
MELO3C007853.2 Cucumis melo HOM05D004004 ORTHO05D003284 2.3e-08 63.2 76 43.4
AL3G16680 Arabidopsis lyrata HOM05D008255 ORTHO05D003284 3.0e-08 62.8 124 37.1
ClCG01G019820 Citrullus lanatus HOM05D004004 ORTHO05D003284 3.0e-08 62.8 77 42.9
Migut.L00026 Erythranthe guttata HOM05D004004 ORTHO05D003284 3.0e-08 62.8 66 47.0
Psat2g157520 Pisum sativum HOM05D004004 ORTHO05D003284 3.0e-08 62.8 75 40.0
TWI12G0953 Tripterygium wilfordii HOM05D004004 ORTHO05D003284 3.0e-08 62.8 116 41.4
Aqoxy6G01169 Aquilegia oxysepala HOM05D004004 ORTHO05D003284 4.0e-08 62.4 69 46.4
ECA236G3928 Erigeron canadensis HOM05D008255 ORTHO05D003284 4.0e-08 62.4 66 47.0
Os04g0661100 Oryza sativa ssp. japonica HOM05D004004 ORTHO05D003284 5.2e-08 62.0 69 42.0
Ah.02g125000 Amaranthus hybridus HOM05D004004 ORTHO05D003284 6.8e-08 61.6 125 34.4
HanXRQChr16g0528781 Helianthus annuus HOM05D008255 ORTHO05D003284 6.8e-08 61.6 72 43.1
MBI16_g26156_MAGBIO Magnolia biondii HOM05D004004 ORTHO05D003284 6.8e-08 61.6 113 32.7
CARHR080380 Cardamine hirsuta HOM05D008255 ORTHO05D003284 1.2e-07 60.8 126 37.3
CANSAT25G0030 Cannabis sativa HOM05D004004 ORTHO05D003284 1.5e-07 60.5 72 38.9
Eucgr.H01343 Eucalyptus grandis HOM05D004004 ORTHO05D003284 1.5e-07 60.5 90 38.9
FAN27G0008 Fragaria x ananassa HOM05D004004 ORTHO05D003284 1.5e-07 60.5 67 50.7
CiPaw.08G139600 Carya illinoinensis HOM05D004004 ORTHO05D003284 2.0e-07 60.1 127 33.1
HanXRQChr14g0440621 Helianthus annuus HOM05D004004 ORTHO05D003284 2.0e-07 60.1 73 41.1
PSO541G0719 Papaver somniferum HOM05D004004 ORTHO05D003284 2.0e-07 60.1 76 42.1
Rhsim07G0216600 Rhododendron simsii HOM05D004004 ORTHO05D003284 2.0e-07 60.1 57 52.6
vmacro21674 Vaccinium macrocarpon HOM05D003425 ORTHO05D003897 2.6e-07 59.7 94 35.1
Gorai.008G065800 Gossypium raimondii HOM05D004004 ORTHO05D003284 3.4e-07 59.3 70 44.3
HanXRQChr02g0031231 Helianthus annuus HOM05D000607 ORTHO05D003284 3.4e-07 59.3 74 41.9
Lsat_1_v5_gn_2_77660 Lactuca sativa HOM05D004004 ORTHO05D003284 3.4e-07 59.3 69 39.1
Actinidia22522 Actinidia chinensis HOM05D004004 ORTHO05D003284 4.4e-07 58.9 121 34.7
Gohir.D12G062800 Gossypium hirsutum HOM05D004004 ORTHO05D003284 4.4e-07 58.9 70 44.3
HanXRQChr14g0440601 Helianthus annuus HOM05D004004 ORTHO05D003284 4.4e-07 58.9 73 39.7
Manes.02G097000 Manihot esculenta HOM05D004004 ORTHO05D003284 4.4e-07 58.9 70 38.6
Sp2g21330 Schrenkiella parvula HOM05D008255 ORTHO05D003284 4.4e-07 58.9 57 49.1
EL10As5g23553 Beta vulgaris HOM05D004028 ORTHO05D004844 5.7e-07 58.5 139 32.4
PSO675G0710 Papaver somniferum HOM05D004004 ORTHO05D003284 5.7e-07 58.5 70 42.9
Rhsim07G0216700 Rhododendron simsii HOM05D004004 ORTHO05D003284 5.7e-07 58.5 50 54.0
Gohir.A12G062900 Gossypium hirsutum HOM05D004004 ORTHO05D003284 7.5e-07 58.2 70 42.9
Potri.002G032800 Populus trichocarpa HOM05D004004 ORTHO05D003284 7.5e-07 58.2 102 34.3
Cc04_g13550 Coffea canephora HOM05D004004 ORTHO05D003284 9.8e-07 57.8 91 37.4
ECA236G0870 Erigeron canadensis HOM05D000607 ORTHO05D003284 9.8e-07 57.8 64 48.4
ECA238G4041 Erigeron canadensis HOM05D004004 ORTHO05D003284 9.8e-07 57.8 73 38.4
vmacro22230 Vaccinium macrocarpon HOM05D004004 ORTHO05D003284 9.8e-07 57.8 56 51.8
Ah.11g046570 Amaranthus hybridus HOM05D005485 ORTHO05D007343 1.3e-06 57.4 132 31.8
TAR381G0545 Trochodendron aralioides HOM05D000607 ORTHO05D003284 1.3e-06 57.4 113 34.5
Lsat_1_v5_gn_9_81421 Lactuca sativa HOM05D000607 ORTHO05D003284 2.2e-06 56.6 103 38.8
Manes.05G156200 Manihot esculenta HOM05D000607 ORTHO05D003284 2.2e-06 56.6 117 33.3
Potri.005G230300 Populus trichocarpa HOM05D004004 ORTHO05D003284 2.2e-06 56.6 95 33.7
Cc10_g02540 Coffea canephora HOM05D004004 ORTHO05D003284 2.8e-06 56.2 96 36.5
DCAR_022465 Daucus carota HOM05D004004 ORTHO05D003284 2.8e-06 56.2 98 37.8
Nn3g19201 Nelumbo nucifera HOM05D008255 ORTHO05D003284 2.8e-06 56.2 49 57.1
SEGI_25359 Sequoiadendron giganteum HOM05D004004 ORTHO05D003284 2.8e-06 56.2 117 35.9
RcHm_v2.0_Chr6g0301541 Rosa chinensis HOM05D004004 ORTHO05D003284 3.7e-06 55.8 98 33.7
CiPaw.02G034100 Carya illinoinensis HOM05D000607 ORTHO05D000518 4.9e-06 55.5 74 35.1
Ciclev10002820m.g Citrus clementina HOM05D004004 ORTHO05D003284 4.9e-06 55.5 116 32.8
Atru.chr13.424 Acer truncatum HOM05D004004 ORTHO05D003284 6.3e-06 55.1 113 31.9
Nn1g04908 Nelumbo nucifera HOM05D000607 ORTHO05D003284 6.3e-06 55.1 106 36.8
Haze_22537 Corylus avellana HOM05D003425 ORTHO05D003897 8.3e-06 54.7 71 36.6
Haze_22541 Corylus avellana HOM05D004004 ORTHO05D003284 8.3e-06 54.7 71 36.6


User provided reference genes

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