Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu025646.1 Olea europaea HOM05D007113 ORTHO05D008859 8.5e-54 213.4 106 100.0
ECA238G3418 Erigeron canadensis HOM05D007113 ORTHO05D008859 8.0e-28 127.1 101 67.3
Lsat_1_v5_gn_9_63261 Lactuca sativa HOM05D007113 ORTHO05D008859 1.8e-27 125.9 100 66.0
Oeu028599.1 Olea europaea HOM05D007113 ORTHO05D008859 3.1e-27 125.2 103 67.0
HanXRQChr14g0460151 Helianthus annuus HOM05D007113 ORTHO05D008859 5.2e-27 124.4 79 78.5
Lsat_1_v5_gn_2_121221 Lactuca sativa HOM05D007113 ORTHO05D008859 2.6e-26 122.1 105 64.8
DCAR_028817 Daucus carota HOM05D007113 ORTHO05D008859 4.4e-26 121.3 75 80.0
CDE03G0108 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 2.9e-25 118.6 108 64.8
COL.COLO4_14561 Corchorus olitorius HOM05D007113 ORTHO05D008859 3.7e-25 118.2 89 67.4
CDE04G2391 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 6.4e-25 117.5 105 62.9
SalBow6G1146 Salvia bowleyana HOM05D007113 ORTHO05D008859 1.1e-24 116.7 105 62.9
CSS0048161 Camellia sinensis var. sinensis HOM05D007113 ORTHO05D008859 1.4e-24 116.3 101 65.3
Gorai.002G262200 Gossypium raimondii HOM05D007113 ORTHO05D008859 1.4e-24 116.3 100 62.0
ATR0618G049 Amborella trichopoda HOM05D007113 ORTHO05D008859 1.9e-24 115.9 107 60.7
Atru.chr8.2216 Acer truncatum HOM05D007113 ORTHO05D008859 3.2e-24 115.2 95 65.3
Gohir.A01G226400 Gossypium hirsutum HOM05D007113 ORTHO05D008859 3.2e-24 115.2 100 61.0
Nn8g40109 Nelumbo nucifera HOM05D007113 ORTHO05D008859 4.1e-24 114.8 98 62.2
THA.LOC104805827 Tarenaya hassleriana HOM05D007113 ORTHO05D008859 4.1e-24 114.8 82 69.5
Cc02_g06720 Coffea canephora HOM05D007113 ORTHO05D008859 5.4e-24 114.4 78 75.6
Ciclev10013049m.g Citrus clementina HOM05D007113 ORTHO05D008859 9.2e-24 113.6 97 62.9
Eucgr.K02991 Eucalyptus grandis HOM05D007113 ORTHO05D008859 1.2e-23 113.2 74 75.7
Gohir.D01G216000 Gossypium hirsutum HOM05D007113 ORTHO05D008859 1.2e-23 113.2 100 61.0
Hma1.2p1_0362F.1_g136060 Hydrangea macrophylla HOM05D007113 ORTHO05D008859 1.6e-23 112.8 95 64.2
MD04G1149600 Malus domestica HOM05D007113 ORTHO05D008859 1.6e-23 112.8 94 61.7
Dinv34405 Davidia involucrata HOM05D007113 ORTHO05D008859 2.0e-23 112.5 74 75.7
Thecc.05G019300 Theobroma cacao HOM05D007113 ORTHO05D008859 4.6e-23 111.3 74 73.0
GSVIVG01033979001 Vitis vinifera HOM05D007113 ORTHO05D008859 4.6e-23 111.3 73 72.6
A05p07890 Brassica napus HOM05D007113 ORTHO05D008859 6.0e-23 110.9 105 59.0
Migut.F01372 Erythranthe guttata HOM05D007113 ORTHO05D008859 6.0e-23 110.9 86 69.8
Aa31sc189G20 Aethionema arabicum HOM05D007113 ORTHO05D008859 1.0e-22 110.2 98 61.2
C04p09540 Brassica napus HOM05D007113 ORTHO05D008859 1.7e-22 109.4 74 73.0
BolC4t22560H Brassica oleracea HOM05D007113 ORTHO05D008859 1.7e-22 109.4 74 73.0
BraA05t19755Z Brassica rapa HOM05D007113 ORTHO05D008859 1.7e-22 109.4 74 73.0
PGR004G1045 Punica granatum HOM05D007113 ORTHO05D008859 1.7e-22 109.4 74 73.0
Duzib093G1147 Durio zibethinus HOM05D007113 ORTHO05D008859 2.3e-22 109.0 74 71.6
FAN05G2893 Fragaria x ananassa HOM05D007113 ORTHO05D008859 2.3e-22 109.0 94 60.6
FAN09G0121 Fragaria x ananassa HOM05D007113 ORTHO05D008859 2.3e-22 109.0 94 60.6
FAN14G1367 Fragaria x ananassa HOM05D007113 ORTHO05D008859 2.3e-22 109.0 94 60.6
AT2G38140 Arabidopsis thaliana HOM05D007113 ORTHO05D008859 3.9e-22 108.2 74 71.6
CARHR132730 Cardamine hirsuta HOM05D007113 ORTHO05D008859 3.9e-22 108.2 74 71.6
MD12G1164000 Malus domestica HOM05D007113 ORTHO05D008859 5.0e-22 107.8 94 60.6
unitig_62.g23930 Utricularia gibba HOM05D000230 ORTHO05D000176 6.6e-22 107.5 79 67.1
Nitab4.5_0000802g0080 Nicotiana tabacum HOM05D007113 ORTHO05D008859 1.1e-21 106.7 90 60.0
TWI74G0516 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 1.5e-21 106.3 101 60.4
CiPaw.10G155700 Carya illinoinensis HOM05D007113 ORTHO05D008859 1.9e-21 105.9 72 70.8
Haze_20976 Corylus avellana HOM05D007113 ORTHO05D008859 1.9e-21 105.9 85 63.5
Nitab4.5_0008493g0040 Nicotiana tabacum HOM05D007113 ORTHO05D008859 1.9e-21 105.9 90 58.9
MELO3C003245.2 Cucumis melo HOM05D007113 ORTHO05D008859 2.5e-21 105.5 75 69.3
Lalb_Chr07g0193491 Lupinus albus HOM05D007113 ORTHO05D008859 2.5e-21 105.5 77 67.5
PSO339G1456 Papaver somniferum HOM05D007113 ORTHO05D008859 2.5e-21 105.5 100 58.0
CsaV3_4G026180 Cucumis sativus L. HOM05D007113 ORTHO05D008859 3.3e-21 105.1 75 68.0
PSO384G2929 Papaver somniferum HOM05D007113 ORTHO05D008859 3.3e-21 105.1 111 54.1
Solyc05g052710.3 Solanum lycopersicum HOM05D007113 ORTHO05D008859 4.3e-21 104.8 73 71.2
RcHm_v2.0_Chr3g0463511 Rosa chinensis HOM05D007113 ORTHO05D008859 7.3e-21 104.0 71 71.8
Actinidia29691 Actinidia chinensis HOM05D007113 ORTHO05D008859 9.5e-21 103.6 72 69.4
arahy.Tifrunner.gnm1.ann1.J29A80 Arachis hypogaea HOM05D007113 ORTHO05D008859 9.5e-21 103.6 75 69.3
FvH4_6g11730 Fragaria vesca HOM05D007113 ORTHO05D008859 9.5e-21 103.6 94 58.5
PGSC0003DMG400027129 Solanum tuberosum HOM05D007113 ORTHO05D008859 9.5e-21 103.6 70 71.4
arahy.Tifrunner.gnm1.ann1.62SCQ6 Arachis hypogaea HOM05D007113 ORTHO05D008859 1.2e-20 103.2 74 70.3
Cfa017230 Carpinus fangiana HOM05D007113 ORTHO05D008859 1.6e-20 102.8 70 68.6
ClCG04G007070 Citrullus lanatus HOM05D007113 ORTHO05D008859 1.6e-20 102.8 72 69.4
Sed0004762 Sechium edule HOM05D007113 ORTHO05D008859 1.6e-20 102.8 75 69.3
Sopen05g031230 Solanum pennellii HOM05D007113 ORTHO05D008859 1.6e-20 102.8 67 73.1
VMungo1127G1807 Vigna mungo HOM05D007113 ORTHO05D008859 2.1e-20 102.4 126 48.4
TWI77G0060 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 2.8e-20 102.1 90 61.1
Phvul.010G003200 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 3.6e-20 101.7 92 58.7
FAN02G3283 Fragaria x ananassa HOM05D008730 ORTHO05D008859 4.7e-20 101.3 56 82.1
Phvul.004G171400 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 8.1e-20 100.5 92 58.7
Lsat_1_v5_gn_9_63281 Lactuca sativa HOM05D005832 ORTHO05D007117 1.1e-19 100.1 83 61.4
CANSAT35G0395 Cannabis sativa HOM05D007113 ORTHO05D008859 1.8e-19 99.4 69 71.0
Lj3g0022517 Lotus japonicus HOM05D007113 ORTHO05D008859 1.8e-19 99.4 75 65.3
FAN14G0869 Fragaria x ananassa HOM05D008730 ORTHO05D010922 2.3e-19 99.0 56 80.4
vmacro06980 Vaccinium macrocarpon HOM05D007113 ORTHO05D008859 2.3e-19 99.0 76 68.4
CAN.G503.7 Capsicum annuum HOM05D007113 ORTHO05D008859 3.1e-19 98.6 57 73.7
Peaxi162Scf00957g00229 Petunia axillaris HOM05D011221 ORTHO05D013370 3.1e-19 98.6 65 70.8
Nitab4.5_0004338g0130 Nicotiana tabacum HOM05D007113 ORTHO05D008859 4.0e-19 98.2 55 78.2
Potri.016G113700 Populus trichocarpa HOM05D007113 ORTHO05D008859 4.0e-19 98.2 94 58.5
Aqoxy4G02617 Aquilegia oxysepala HOM05D007113 ORTHO05D008859 6.8e-19 97.4 98 54.1
Glyma.03G063200 Glycine max HOM05D007113 ORTHO05D008859 6.8e-19 97.4 126 47.6
HPP92_019871 Vanilla planifolia HOM05D007113 ORTHO05D008859 8.9e-19 97.1 70 67.1
Zm00001eb144250 Zea mays HOM05D007113 ORTHO05D008859 2.0e-18 95.9 69 68.1
Manes.08G090600 Manihot esculenta HOM05D007113 ORTHO05D008859 2.6e-18 95.5 76 65.8
Sc11g0007190 Simmondsia chinensis HOM05D007113 ORTHO05D008859 2.6e-18 95.5 67 65.7
Os05g0186000 Oryza sativa ssp. japonica HOM05D007113 ORTHO05D008859 4.4e-18 94.7 56 78.6
TPR.G13351 Trifolium pratense HOM05D007113 ORTHO05D008859 7.5e-18 94.0 79 59.5
TAR623G1648 Trochodendron aralioides HOM05D007113 ORTHO05D008859 7.5e-18 94.0 74 62.2
Medtr4g015540 Medicago truncatula HOM05D007113 ORTHO05D008859 1.3e-17 93.2 97 52.6
TWI53G1153 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 1.3e-17 93.2 73 63.0
Glyma.01G114800 Glycine max HOM05D007113 ORTHO05D008859 1.7e-17 92.8 75 65.3
Psat7g246120 Pisum sativum HOM05D007113 ORTHO05D008859 2.9e-17 92.0 67 64.2
SGA_v2.0_scaffold78G25464 Striga asiatica HOM05D007113 ORTHO05D008859 3.7e-17 91.7 79 60.8
SGA_v2.0_scaffold20G09268 Striga asiatica HOM05D007113 ORTHO05D008859 2.4e-16 89.0 74 62.2
Hund23901 Selenicereus undatus HOM05D007113 ORTHO05D008859 4.1e-16 88.2 68 60.3
Rhsim03G0141800 Rhododendron simsii HOM05D007113 ORTHO05D008859 5.4e-16 87.8 96 52.1
SEGI_10938 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 1.6e-15 86.3 73 60.3
SEGI_38672 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 1.6e-15 86.3 73 60.3
Ca_20298_v3 Cicer arietinum L. HOM05D007113 ORTHO05D008859 6.0e-15 84.3 78 55.1
EL10Ac2g04810 Beta vulgaris HOM05D007113 ORTHO05D008859 1.0e-14 83.6 65 64.6
Haze_17209 Corylus avellana HOM05D007113 ORTHO05D008859 3.9e-14 81.6 75 56.0
QL08p062975 Quercus lobata HOM05D007113 ORTHO05D008859 8.6e-14 80.5 75 53.3
Ah.16g103370 Amaranthus hybridus HOM05D007113 ORTHO05D008859 1.9e-13 79.3 47 72.3
Sp4g20460 Schrenkiella parvula HOM05D007113 ORTHO05D008859 9.5e-13 77.0 86 51.2
Mapoly0005s0194 Marchantia polymorpha HOM05D007113 ORTHO05D008859 1.2e-12 76.6 75 48.0
arahy.Tifrunner.gnm1.ann1.C0BXE8 Arachis hypogaea HOM05D007113 ORTHO05D008859 2.1e-12 75.9 68 52.9
AagrBONN_evm.TU.Sc2ySwM_362.1890 Anthoceros agrestis HOM05D007113 ORTHO05D008859 2.8e-12 75.5 89 46.1
Carub.0004s2011 Capsella rubella HOM05D007113 ORTHO05D008859 2.8e-12 75.5 74 54.1
AL4G35140 Arabidopsis lyrata HOM05D007113 ORTHO05D008859 1.4e-11 73.2 96 45.8
Thhalv10017376m.g Eutrema salsugineum HOM05D007113 ORTHO05D008859 5.2e-11 71.2 74 51.4
arahy.Tifrunner.gnm1.ann1.CDY6H8 Arachis hypogaea HOM05D007113 ORTHO05D008859 1.2e-10 70.1 68 50.0
Pp3c15_12810 Physcomitrium patens HOM05D007113 ORTHO05D008859 1.6e-07 59.7 73 45.2
Pp3c9_12290 Physcomitrium patens HOM05D007113 ORTHO05D008859 3.5e-07 58.5 73 43.8
VMungo0331G1181 Vigna mungo HOM05D007113 ORTHO05D008859 4.6e-07 58.2 102 41.2
Peaxi162Scf01313g00026 Petunia axillaris HOM05D007113 ORTHO05D008859 5.1e-06 54.7 31 74.2


User provided reference genes

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