Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu025611.2 Olea europaea HOM05D000292 ORTHO05D014388 2.4e-28 128.3 70 100.0
Oeu004611.5 Olea europaea HOM05D000292 ORTHO05D000172 1.6e-11 72.4 67 64.2
arahy.Tifrunner.gnm1.ann1.0WKU4E Arachis hypogaea HOM05D003028 ORTHO05D003465 8.5e-10 66.6 67 53.7
arahy.Tifrunner.gnm1.ann1.LNF7XX Arachis hypogaea HOM05D000292 ORTHO05D000172 3.2e-09 64.7 67 52.2
Lj3g0021020 Lotus japonicus HOM05D000292 ORTHO05D000172 7.2e-09 63.5 64 54.7
Glyma.18G194200 Glycine max HOM05D000292 ORTHO05D000172 1.6e-08 62.4 66 51.5
Medtr4g017830 Medicago truncatula HOM05D000292 ORTHO05D000172 2.1e-08 62.0 64 50.0
Lj1g0016229 Lotus japonicus HOM05D000292 ORTHO05D000172 2.7e-08 61.6 64 53.1
Lj3g0027479 Lotus japonicus HOM05D000292 ORTHO05D000172 3.6e-08 61.2 64 51.6
Medtr7g066430 Medicago truncatula HOM05D000292 ORTHO05D000172 3.6e-08 61.2 63 54.0
Ca_20099_v3 Cicer arietinum L. HOM05D000292 ORTHO05D000172 4.7e-08 60.8 64 48.4
Lj3g0008222 Lotus japonicus HOM05D000292 ORTHO05D000172 4.7e-08 60.8 64 53.1
Lj3g0013202 Lotus japonicus HOM05D000292 ORTHO05D000172 4.7e-08 60.8 64 53.1
DCAR_016318 Daucus carota HOM05D000292 ORTHO05D000172 6.1e-08 60.5 60 56.7
Oeu044371.1 Olea europaea HOM05D000292 ORTHO05D000172 6.1e-08 60.5 52 67.3
Medtr7g066260 Medicago truncatula HOM05D000292 ORTHO05D000172 1.8e-07 58.9 67 44.8
Peaxi162Scf01352g00021 Petunia axillaris HOM05D000292 ORTHO05D000172 1.8e-07 58.9 67 53.7
Peaxi162Scf01547g00007 Petunia axillaris HOM05D000292 ORTHO05D000172 1.8e-07 58.9 67 53.7
TPR.G1577 Trifolium pratense HOM05D000292 ORTHO05D000172 1.8e-07 58.9 59 50.8
TPR.G30631 Trifolium pratense HOM05D000292 ORTHO05D000172 1.8e-07 58.9 62 48.4
TPR.G7629 Trifolium pratense HOM05D000292 ORTHO05D000172 1.8e-07 58.9 64 48.4
Medtr7g066280 Medicago truncatula HOM05D000292 ORTHO05D000172 2.3e-07 58.5 63 47.6
Peaxi162Scf00141g00031 Petunia axillaris HOM05D000292 ORTHO05D000172 2.3e-07 58.5 67 53.7
Phvul.008G110500 Phaseolus vulgaris HOM05D000292 ORTHO05D000172 2.3e-07 58.5 62 51.6
Ca_09163_v3 Cicer arietinum L. HOM05D000292 ORTHO05D000172 3.0e-07 58.2 64 50.0
Medtr7g063900 Medicago truncatula HOM05D000292 ORTHO05D000172 3.0e-07 58.2 68 42.6
Medtr7g066480 Medicago truncatula HOM05D000292 ORTHO05D000172 3.0e-07 58.2 63 49.2
Peaxi162Scf00141g00027 Petunia axillaris HOM05D000292 ORTHO05D000172 3.0e-07 58.2 67 53.7
Phvul.008G110700 Phaseolus vulgaris HOM05D000292 ORTHO05D000172 3.0e-07 58.2 60 51.7
Nitab4.5_0021301g0010 Nicotiana tabacum HOM05D000292 ORTHO05D000172 4.0e-07 57.8 68 54.4
TPR.G34874 Trifolium pratense HOM05D000292 ORTHO05D000172 4.0e-07 57.8 59 52.5
Glyma.18G194700 Glycine max HOM05D000292 ORTHO05D000172 5.2e-07 57.4 63 54.0
Glyma.18G194800 Glycine max HOM05D000292 ORTHO05D000172 5.2e-07 57.4 66 51.5
Glyma.18G194900 Glycine max HOM05D000292 ORTHO05D000172 5.2e-07 57.4 68 47.1
TPR.G34864 Trifolium pratense HOM05D000292 ORTHO05D000172 5.2e-07 57.4 67 44.8
TPR.G34868 Trifolium pratense HOM05D000292 ORTHO05D000172 5.2e-07 57.4 66 51.5
TAR636G0285 Trochodendron aralioides HOM05D000292 ORTHO05D000172 5.2e-07 57.4 59 52.5
Migut.M00471 Erythranthe guttata HOM05D000292 ORTHO05D000172 6.7e-07 57.0 63 50.8
Lj1g0012967 Lotus japonicus HOM05D000292 ORTHO05D000172 6.7e-07 57.0 61 52.5
Psat7g242200 Pisum sativum HOM05D000292 ORTHO05D000172 6.7e-07 57.0 67 44.8
Sp3g24320 Schrenkiella parvula HOM05D000292 ORTHO05D000172 6.7e-07 57.0 63 47.6
Solyc09g011910.3 Solanum lycopersicum HOM05D000292 ORTHO05D000172 6.7e-07 57.0 65 53.8
arahy.Tifrunner.gnm1.ann1.Z9ZW6U Arachis hypogaea HOM05D000292 ORTHO05D000172 8.8e-07 56.6 67 46.3
Medtr7g066350 Medicago truncatula HOM05D000292 ORTHO05D000172 8.8e-07 56.6 59 49.2
Sp6g40510 Schrenkiella parvula HOM05D000292 ORTHO05D000172 8.8e-07 56.6 63 50.8
PGSC0003DMG400020332 Solanum tuberosum HOM05D000292 ORTHO05D000172 8.8e-07 56.6 65 53.8
arahy.Tifrunner.gnm1.ann1.L6Q662 Arachis hypogaea HOM05D000292 ORTHO05D000172 1.2e-06 56.2 66 45.5
Gohir.A01G224500 Gossypium hirsutum HOM05D000292 ORTHO05D000172 1.2e-06 56.2 63 55.6
Medtr7g066310 Medicago truncatula HOM05D000292 ORTHO05D000172 1.2e-06 56.2 63 47.6
Medtr7g066490 Medicago truncatula HOM05D000292 ORTHO05D000172 1.2e-06 56.2 63 49.2
C03p00640 Brassica napus HOM05D000292 ORTHO05D014388 1.5e-06 55.8 63 49.2
C03p08260 Brassica napus HOM05D000292 ORTHO05D014388 1.5e-06 55.8 63 49.2
Sopen09g006710 Solanum pennellii HOM05D000292 ORTHO05D000172 1.5e-06 55.8 67 52.2
Sopen09g006720 Solanum pennellii HOM05D000292 ORTHO05D000172 1.5e-06 55.8 65 53.8
Aqoxy1G00757 Aquilegia oxysepala HOM05D000292 ORTHO05D000172 2.0e-06 55.5 56 53.6
Ca_07039_v3 Cicer arietinum L. HOM05D000292 ORTHO05D000172 2.0e-06 55.5 62 46.8
Glyma.07G143300 Glycine max HOM05D000292 ORTHO05D000172 2.0e-06 55.5 66 48.5
Medtr7g066290 Medicago truncatula HOM05D000292 ORTHO05D000172 2.0e-06 55.5 63 44.4
Medtr7g066410 Medicago truncatula HOM05D000292 ORTHO05D000172 2.0e-06 55.5 66 48.5
TPR.G34867 Trifolium pratense HOM05D000292 ORTHO05D000172 2.0e-06 55.5 63 49.2
TPR.G35161 Trifolium pratense HOM05D000292 ORTHO05D000172 2.0e-06 55.5 66 45.5
VMungo1383G1253 Vigna mungo HOM05D000292 ORTHO05D000172 2.0e-06 55.5 67 44.8
BcaB06g26865 Brassica carinata HOM05D000292 ORTHO05D000172 2.6e-06 55.1 63 47.6
Migut.M00460 Erythranthe guttata HOM05D000292 ORTHO05D000172 2.6e-06 55.1 60 53.3
Medtr7g066360 Medicago truncatula HOM05D000292 ORTHO05D000172 2.6e-06 55.1 64 43.8
Medtr7g066570 Medicago truncatula HOM05D000292 ORTHO05D000172 2.6e-06 55.1 66 47.0
Phvul.010G007500 Phaseolus vulgaris HOM05D000292 ORTHO05D000172 2.6e-06 55.1 61 54.1
Psat3g135120 Pisum sativum HOM05D000292 ORTHO05D000172 2.6e-06 55.1 63 46.0
TPR.G11126 Trifolium pratense HOM05D000292 ORTHO05D000172 2.6e-06 55.1 67 41.8
TPR.G1549 Trifolium pratense HOM05D000292 ORTHO05D000172 2.6e-06 55.1 65 49.2
TAR636G2636 Trochodendron aralioides HOM05D000292 ORTHO05D000172 2.6e-06 55.1 59 50.8
AL3G20190 Arabidopsis lyrata HOM05D000292 ORTHO05D000172 3.3e-06 54.7 63 49.2
Carub.0006s0075 Capsella rubella HOM05D000292 ORTHO05D000172 3.3e-06 54.7 62 45.2
Psat0s3131g0040 Pisum sativum HOM05D000292 ORTHO05D000172 3.3e-06 54.7 67 46.3
Psat3g131640 Pisum sativum HOM05D000292 ORTHO05D000172 3.3e-06 54.7 66 45.5
PGSC0003DMG400020357 Solanum tuberosum HOM05D000292 ORTHO05D000172 3.3e-06 54.7 67 53.7
PGSC0003DMG400020358 Solanum tuberosum HOM05D000292 ORTHO05D000172 3.3e-06 54.7 67 50.7
TPR.G18393 Trifolium pratense HOM05D000292 ORTHO05D000172 3.3e-06 54.7 64 43.8
arahy.Tifrunner.gnm1.ann1.MAZ402 Arachis hypogaea HOM05D000292 ORTHO05D000172 4.4e-06 54.3 62 48.4
TPR.G8199 Trifolium pratense HOM05D000292 ORTHO05D000172 4.4e-06 54.3 70 45.7
TAR636G3432 Trochodendron aralioides HOM05D000292 ORTHO05D000172 4.4e-06 54.3 59 47.5
Phvul.008G110200 Phaseolus vulgaris HOM05D000292 ORTHO05D000172 5.7e-06 53.9 66 48.5
Psat3g135400 Pisum sativum HOM05D000292 ORTHO05D000172 5.7e-06 53.9 66 48.5
TAR636G1917 Trochodendron aralioides HOM05D000292 ORTHO05D000172 5.7e-06 53.9 59 47.5
TAR636G2800 Trochodendron aralioides HOM05D000292 ORTHO05D000172 5.7e-06 53.9 59 49.2
AL9U10500 Arabidopsis lyrata HOM05D001832 ORTHO05D001861 7.5e-06 53.5 67 47.8
Medtr7g066340 Medicago truncatula HOM05D000292 ORTHO05D000172 7.5e-06 53.5 63 46.0
TAR636G3084 Trochodendron aralioides HOM05D000292 ORTHO05D000172 7.5e-06 53.5 59 50.8
AL6G11080 Arabidopsis lyrata HOM05D000292 ORTHO05D000172 9.7e-06 53.1 62 43.5
arahy.Tifrunner.gnm1.ann1.PF7WV9 Arachis hypogaea HOM05D000292 ORTHO05D000172 9.7e-06 53.1 63 46.0
arahy.Tifrunner.gnm1.ann1.ZH6UKT Arachis hypogaea HOM05D000292 ORTHO05D000172 9.7e-06 53.1 65 46.2
Ca_09161_v3 Cicer arietinum L. HOM05D000292 ORTHO05D000172 9.7e-06 53.1 63 42.9
Lj1g0023764 Lotus japonicus HOM05D000292 ORTHO05D000172 9.7e-06 53.1 63 46.0
Psat5g040960 Pisum sativum HOM05D000292 ORTHO05D000172 9.7e-06 53.1 66 42.4
Psat7g244280 Pisum sativum HOM05D000292 ORTHO05D000172 9.7e-06 53.1 64 45.3
Sp5g15130 Schrenkiella parvula HOM05D000020 ORTHO05D000172 9.7e-06 53.1 63 46.0
TPR.G18526 Trifolium pratense HOM05D000292 ORTHO05D000172 9.7e-06 53.1 67 46.3


User provided reference genes

Program Settings