Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu025571.1 Olea europaea HOM05D005412 ORTHO05D006096 0.0e+00 3071.2 1517 100.0
Migut.B00339 Erythranthe guttata HOM05D005412 ORTHO05D006096 0.0e+00 1500.3 1683 50.7
Dinv42150 Davidia involucrata HOM05D005412 ORTHO05D006096 0.0e+00 1474.9 1718 49.5
Dinv23615 Davidia involucrata HOM05D005412 ORTHO05D006096 0.0e+00 1442.2 1726 48.6
CSS0011349 Camellia sinensis var. sinensis HOM05D005412 ORTHO05D006096 0.0e+00 1329.3 1734 46.4
TAR628G0752 Trochodendron aralioides HOM05D005412 ORTHO05D006096 0.0e+00 1305.0 1735 45.5
SGA_v2.0_scaffold90G27665 Striga asiatica HOM05D005412 ORTHO05D006096 0.0e+00 1298.9 1637 47.4
Rhsim11G0166400 Rhododendron simsii HOM05D005412 ORTHO05D006096 0.0e+00 1295.4 1720 45.2
Cc02_g18700 Coffea canephora HOM05D005412 ORTHO05D006096 0.0e+00 1275.0 1713 44.7
GSVIVG01031759001 Vitis vinifera HOM05D005412 ORTHO05D006096 0.0e+00 1271.1 1660 45.6
TAR376G0189 Trochodendron aralioides HOM05D005412 ORTHO05D006096 0.0e+00 1251.5 1717 44.1
vmacro02202 Vaccinium macrocarpon HOM05D005412 ORTHO05D006096 0.0e+00 1238.8 1708 44.3
Haze_01830 Corylus avellana HOM05D005412 ORTHO05D006096 0.0e+00 1238.0 1733 43.5
Nitab4.5_0003503g0010 Nicotiana tabacum HOM05D005412 ORTHO05D006096 0.0e+00 1226.8 1698 44.2
Nitab4.5_0003080g0090 Nicotiana tabacum HOM05D005412 ORTHO05D006096 0.0e+00 1222.2 1704 43.8
Peaxi162Scf00016g01825 Petunia axillaris HOM05D005412 ORTHO05D006096 0.0e+00 1214.1 1699 44.1
CAN.G1041.23 Capsicum annuum HOM05D005412 ORTHO05D006096 0.0e+00 1202.6 1709 44.1
Nn5g30243 Nelumbo nucifera HOM05D005412 ORTHO05D006096 0.0e+00 1196.4 1722 43.4
QL11p036050 Quercus lobata HOM05D005412 ORTHO05D006096 0.0e+00 1196.4 1696 42.9
CiPaw.05G051900 Carya illinoinensis HOM05D005412 ORTHO05D006096 0.0e+00 1194.9 1711 43.0
Prupe.8G123400 Prunus persica HOM05D005412 ORTHO05D006096 0.0e+00 1191.4 1701 44.4
Potri.009G102900 Populus trichocarpa HOM05D005412 ORTHO05D006096 0.0e+00 1181.0 1693 42.1
Lj9C358T17 Lonicera japonica HOM05D005412 ORTHO05D006096 0.0e+00 1179.9 1627 44.8
Duzib052G1101 Durio zibethinus HOM05D005412 ORTHO05D006096 0.0e+00 1177.5 1711 42.3
Sopen01g050390 Solanum pennellii HOM05D005412 ORTHO05D006096 0.0e+00 1169.1 1698 43.1
Solyc01g108160.3 Solanum lycopersicum HOM05D005412 ORTHO05D006096 0.0e+00 1168.7 1698 43.1
CiPaw.06G143300 Carya illinoinensis HOM05D005412 ORTHO05D006096 0.0e+00 1159.8 1697 42.5
Thecc.02G099500 Theobroma cacao HOM05D005412 ORTHO05D006096 0.0e+00 1159.8 1707 42.5
Potri.004G141700 Populus trichocarpa HOM05D005412 ORTHO05D006096 0.0e+00 1158.3 1688 41.6
DCAR_022030 Daucus carota HOM05D005412 ORTHO05D006096 0.0e+00 1154.4 1718 42.2
Duzib248G0232 Durio zibethinus HOM05D005412 ORTHO05D006096 0.0e+00 1151.0 1701 42.1
MD10G1093800 Malus domestica HOM05D005412 ORTHO05D006096 0.0e+00 1149.8 1685 42.6
COL.COLO4_32667 Corchorus olitorius HOM05D005412 ORTHO05D006096 0.0e+00 1143.6 1705 42.1
TWI79G0096 Tripterygium wilfordii HOM05D005412 ORTHO05D006096 0.0e+00 1139.4 1720 40.8
Sabra09G0078800 Salix brachista HOM05D005412 ORTHO05D006096 0.0e+00 1138.3 1690 41.4
Ciclev10027665m.g Citrus clementina HOM05D005412 ORTHO05D006096 0.0e+00 1129.0 1703 41.2
Gorai.005G238500 Gossypium raimondii HOM05D005412 ORTHO05D006096 0.0e+00 1127.5 1696 41.9
TWI75G0165 Tripterygium wilfordii HOM05D005412 ORTHO05D006096 0.0e+00 1127.1 1714 40.2
Manes.10G065500 Manihot esculenta HOM05D005412 ORTHO05D006096 0.0e+00 1126.7 1708 40.6
MD05G1079500 Malus domestica HOM05D005412 ORTHO05D006096 0.0e+00 1111.7 1688 42.4
RcHm_v2.0_Chr6g0256971 Rosa chinensis HOM05D005412 ORTHO05D006096 0.0e+00 1105.1 1704 42.0
Lalb_Chr09g0328271 Lupinus albus HOM05D005412 ORTHO05D006096 0.0e+00 1085.1 1700 40.1
Sabra04G0093700 Salix brachista HOM05D005412 ORTHO05D006096 0.0e+00 1080.1 1715 40.3
Eucgr.I01159 Eucalyptus grandis HOM05D005412 ORTHO05D006096 1.3e-307 1060.4 1701 39.7
Glyma.07G211600 Glycine max HOM05D005412 ORTHO05D006096 1.6e-307 1060.1 1688 39.1
Glyma.02G133400 Glycine max HOM05D005412 ORTHO05D006096 2.4e-306 1056.2 1687 39.1
FAN24G2004 Fragaria x ananassa HOM05D005412 ORTHO05D006096 1.2e-305 1053.9 1690 40.8
FvH4_2g06220 Fragaria vesca HOM05D005412 ORTHO05D006096 1.5e-305 1053.5 1689 40.8
ClCG05G010030 Citrullus lanatus HOM05D005412 ORTHO05D006096 9.9e-305 1050.8 1697 39.7
FAN27G2299 Fragaria x ananassa HOM05D005412 ORTHO05D006096 1.7e-304 1050.0 1690 40.5
PSO210G3961 Papaver somniferum HOM05D005412 ORTHO05D006096 1.1e-303 1047.3 1703 39.4
FAN15G2385 Fragaria x ananassa HOM05D005412 ORTHO05D006096 3.2e-303 1045.8 1692 40.7
FAN20G2783 Fragaria x ananassa HOM05D005412 ORTHO05D006096 7.1e-303 1044.6 1690 40.5
PSO170G0229 Papaver somniferum HOM05D005412 ORTHO05D006096 1.2e-302 1043.9 1703 39.4
Ca_18676_v3 Cicer arietinum L. HOM05D005412 ORTHO05D006096 7.9e-302 1041.2 1711 39.4
VMungo0251G1021 Vigna mungo HOM05D005412 ORTHO05D006096 1.8e-298 1030.0 1692 38.8
Lj4g0027932 Lotus japonicus HOM05D005412 ORTHO05D006096 2.4e-298 1029.6 1678 39.3
Medtr4g086370 Medicago truncatula HOM05D005412 ORTHO05D006096 3.1e-298 1029.2 1704 38.4
MBI02_g17325_MAGBIO Magnolia biondii HOM05D005412 ORTHO05D006096 5.3e-298 1028.5 1805 38.8
arahy.Tifrunner.gnm1.ann1.Q5Y61J Arachis hypogaea HOM05D005412 ORTHO05D006096 3.4e-297 1025.8 1680 39.3
Lsat_1_v5_gn_9_110121 Lactuca sativa HOM05D005412 ORTHO05D006096 3.8e-296 1022.3 1620 40.8
TPR.G30829 Trifolium pratense HOM05D005412 ORTHO05D006096 4.9e-296 1021.9 1745 38.0
Psat7g124160 Pisum sativum HOM05D005412 ORTHO05D006096 1.2e-294 1017.3 1700 38.7
MELO3C019513.2 Cucumis melo HOM05D005412 ORTHO05D006096 3.9e-293 1012.3 1698 38.8
arahy.Tifrunner.gnm1.ann1.4LZP30 Arachis hypogaea HOM05D005412 ORTHO05D006096 3.3e-292 1009.2 1699 38.4
Sed0007905 Sechium edule HOM05D005412 ORTHO05D006096 8.2e-291 1004.6 1707 38.5
HanXRQChr03g0072341 Helianthus annuus HOM05D005412 ORTHO05D006096 9.0e-290 1001.1 1673 40.1
ECA240G0709 Erigeron canadensis HOM05D005412 ORTHO05D006096 2.7e-286 989.6 1601 40.3
Sc14g0001650 Simmondsia chinensis HOM05D005412 ORTHO05D006096 1.3e-285 987.3 1695 38.6
Phvul.003G295800 Phaseolus vulgaris HOM05D005412 ORTHO05D006096 3.1e-282 976.1 1690 37.8
AUR62016618 Chenopodium quinoa HOM05D005412 ORTHO05D006096 6.9e-282 974.9 1700 38.5
AUR62011444 Chenopodium quinoa HOM05D005412 ORTHO05D006096 5.0e-280 968.8 1693 37.9
AL3G32570 Arabidopsis lyrata HOM05D005412 ORTHO05D006096 1.1e-279 967.6 1649 38.7
Thhalv10019879m.g Eutrema salsugineum HOM05D005412 ORTHO05D006096 1.8e-277 960.3 1642 38.6
THA.LOC104800351 Tarenaya hassleriana HOM05D005412 ORTHO05D006096 5.7e-276 955.3 1687 37.2
AT3G19190 Arabidopsis thaliana HOM05D005412 ORTHO05D006096 9.1e-274 948.0 1649 38.0
Hund00331 Selenicereus undatus HOM05D005412 ORTHO05D006096 5.0e-272 942.2 1719 37.2
Carub.0003s1902 Capsella rubella HOM05D005412 ORTHO05D006096 1.2e-270 937.6 1653 37.3
Aqoxy5G01253 Aquilegia oxysepala HOM05D005412 ORTHO05D006096 7.9e-270 934.9 1722 36.9
Aa31LG8G5990 Aethionema arabicum HOM05D005412 ORTHO05D006096 2.3e-269 933.3 1672 37.3
Sp3g17260 Schrenkiella parvula HOM05D005412 ORTHO05D006096 1.5e-268 930.6 1649 37.8
CARHR094600 Cardamine hirsuta HOM05D005412 ORTHO05D006096 2.2e-267 926.8 1656 38.0
BcaB06g25975 Brassica carinata HOM05D005412 ORTHO05D006096 4.8e-267 925.6 1642 37.6
EL10Ac9g21835 Beta vulgaris HOM05D005412 ORTHO05D006096 7.0e-266 921.8 1688 37.0
CsaV3_3G018540 Cucumis sativus L. HOM05D005412 ORTHO05D006096 5.0e-264 915.6 1617 37.8
A05p30450 Brassica napus HOM05D005412 ORTHO05D006096 1.3e-259 901.0 1647 37.6
BolC5t33332H Brassica oleracea HOM05D005412 ORTHO05D006096 1.1e-258 897.9 1649 37.7
C05p46050 Brassica napus HOM05D005412 ORTHO05D006096 1.4e-258 897.5 1650 37.6
Ah.02g117120 Amaranthus hybridus HOM05D005412 ORTHO05D006096 3.1e-258 896.3 1709 36.4
BcaNung06981 Brassica carinata HOM05D005412 ORTHO05D006096 5.3e-258 895.6 1649 37.6
BraA05t21884Z Brassica rapa HOM05D005412 ORTHO05D006096 1.6e-257 894.0 1646 37.8
CDE09G1352 Ceratophyllum demersum HOM05D005412 ORTHO05D006096 3.1e-221 773.5 1688 33.9
Atru.chr5.2730 Acer truncatum HOM05D005412 ORTHO05D006096 2.3e-213 747.3 1233 39.0
ATR0100G063 Amborella trichopoda HOM05D005412 ORTHO05D006096 6.8e-205 719.2 1718 33.1
Gohir.D02G210500 Gossypium hirsutum HOM05D005412 ORTHO05D006096 6.4e-203 712.6 823 47.6
Cpa.g.sc62.21 Carica papaya HOM05D005412 ORTHO05D006096 5.1e-200 703.0 1525 33.7
Gohir.A03G189900 Gossypium hirsutum HOM05D005412 ORTHO05D006096 1.9e-199 701.0 823 46.9
Zm00001eb280540 Zea mays HOM05D005412 ORTHO05D006096 5.1e-176 623.2 1672 30.1
SEGI_28745 Sequoiadendron giganteum HOM05D005412 ORTHO05D006096 2.7e-169 600.9 1792 28.9
unitig_21.g20750 Utricularia gibba HOM05D005412 ORTHO05D006096 2.5e-159 567.8 1113 36.7
Oeu003689.1 Olea europaea HOM05D005412 ORTHO05D006096 1.0e-144 519.2 262 99.2
Actinidia12957 Actinidia chinensis HOM05D005412 ORTHO05D006096 1.6e-124 452.2 995 33.9
SHI05373 Sapria himalayana HOM05D005412 ORTHO05D006096 1.6e-124 452.2 818 34.7
Zm00001eb380180 Zea mays HOM05D005412 ORTHO05D006096 2.3e-115 421.8 841 33.2
Actinidia00447 Actinidia chinensis HOM05D005412 ORTHO05D006096 1.1e-109 402.9 447 52.3
Mapoly0038s0067 Marchantia polymorpha HOM05D005412 ORTHO05D006096 1.4e-109 402.5 1823 25.2
AagrBONN_evm.TU.Sc2ySwM_369.474 Anthoceros agrestis HOM05D005412 ORTHO05D006096 5.6e-98 364.0 1770 24.3
Pp3c13_15610 Physcomitrium patens HOM05D005412 ORTHO05D006096 5.2e-88 330.9 1600 23.7
SHI05374 Sapria himalayana HOM05D005412 ORTHO05D006096 4.2e-69 268.1 511 36.8
HPP92_028321 Vanilla planifolia HOM05D005412 ORTHO05D006096 9.3e-53 213.8 1144 24.4
HPP92_028322 Vanilla planifolia HOM05D005412 ORTHO05D006096 1.6e-52 213.0 216 55.6
Migut.B00336 Erythranthe guttata HOM05D005412 ORTHO05D006096 7.7e-47 194.1 321 41.7
Atru.chr5.2729 Acer truncatum HOM05D005412 ORTHO05D006096 6.1e-44 184.5 290 40.3
MBI18_g07589_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D006096 2.7e-36 159.1 175 49.7
Migut.B00338 Erythranthe guttata HOM05D005412 ORTHO05D006096 7.7e-31 141.0 282 34.0
MBI11_g39905_MAGBIO Magnolia biondii HOM05D005412 ORTHO05D006096 3.2e-29 135.6 109 61.5
Actinidia12956 Actinidia chinensis HOM05D005412 ORTHO05D006096 1.7e-22 113.2 114 50.9
Dinv23623 Davidia involucrata HOM05D005412 ORTHO05D006096 2.9e-22 112.5 79 74.7
Dinv23614 Davidia involucrata HOM05D005412 ORTHO05D006096 8.5e-22 110.9 79 73.4
Dinv23622 Davidia involucrata HOM05D005412 ORTHO05D006096 2.1e-20 106.3 76 75.0
PGSC0003DMG400025793 Solanum tuberosum HOM05D005412 ORTHO05D006096 3.0e-19 102.4 65 78.5
CsaV3_3G018530 Cucumis sativus L. HOM05D005412 ORTHO05D006096 8.8e-19 100.9 106 50.9
CBR_g37898 Chara braunii HOM05D000019 ORTHO05D000048 2.6e-18 99.4 577 22.2
CDE02G1280 Ceratophyllum demersum HOM05D005412 ORTHO05D006096 9.8e-18 97.4 68 70.6
CBR_g37914 Chara braunii HOM05D000019 ORTHO05D000048 7.7e-15 87.8 101 43.6
MCO03G368 Micromonas commoda HOM05D005412 ORTHO05D006096 1.1e-13 84.0 172 29.1
CDE09G1277 Ceratophyllum demersum HOM05D005412 ORTHO05D006096 1.0e-11 77.4 72 58.3
BcaNung06609 Brassica carinata HOM05D005412 ORTHO05D006096 1.8e-11 76.6 56 73.2
Cre09.g408950 Chlamydomonas reinhardtii HOM05D005412 ORTHO05D006096 7.8e-07 61.2 93 31.2
Os06g0267600 Oryza sativa ssp. japonica HOM05D005412 ORTHO05D006096 6.6e-06 58.2 48 54.2


User provided reference genes

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