Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu025569.1 Olea europaea HOM05D003940 ORTHO05D004461 5.1e-57 224.2 111 100.0
Oeu063884.1 Olea europaea HOM05D003940 ORTHO05D004461 1.1e-46 189.9 111 85.6
SalBow3G4424 Salvia bowleyana HOM05D003940 ORTHO05D004461 4.3e-32 141.4 97 75.3
MSTRG.9915 Avicennia marina HOM05D003940 ORTHO05D004461 1.1e-30 136.7 111 64.0
Migut.G00452 Erythranthe guttata HOM05D003940 ORTHO05D004461 1.4e-30 136.3 111 65.8
Migut.G00451 Erythranthe guttata HOM05D003940 ORTHO05D004461 9.0e-30 133.7 111 64.9
Migut.N00250 Erythranthe guttata HOM05D003940 ORTHO05D004461 4.9e-28 127.9 97 66.0
vmacro08448 Vaccinium macrocarpon HOM05D003940 ORTHO05D004461 7.1e-27 124.0 111 63.1
PGSC0003DMG400016324 Solanum tuberosum HOM05D003940 ORTHO05D004461 2.7e-26 122.1 116 58.6
SalBow2G1766 Salvia bowleyana HOM05D003940 ORTHO05D004461 6.0e-26 120.9 115 56.5
Actinidia04462 Actinidia chinensis HOM05D003940 ORTHO05D004461 7.9e-26 120.6 99 56.6
Hma1.2p1_0986F.1_g244370 Hydrangea macrophylla HOM05D003940 ORTHO05D004461 3.0e-25 118.6 115 58.3
Solyc06g053700.1 Solanum lycopersicum HOM05D003940 ORTHO05D004461 3.0e-25 118.6 116 56.9
Sopen06g018810 Solanum pennellii HOM05D003940 ORTHO05D004461 3.0e-25 118.6 116 56.9
SGA_v2.0_scaffold101G29832 Striga asiatica HOM05D003940 ORTHO05D004461 6.7e-25 117.5 105 66.7
Rhsim04G0188200 Rhododendron simsii HOM05D003940 ORTHO05D004461 8.7e-25 117.1 108 57.4
Cc03_g05120 Coffea canephora HOM05D003940 ORTHO05D004461 7.4e-24 114.0 117 55.6
Hma1.2p1_0310F.1_g120730 Hydrangea macrophylla HOM05D003940 ORTHO05D004461 8.2e-23 110.5 124 50.0
Peaxi162Scf00024g01711 Petunia axillaris HOM05D003940 ORTHO05D004461 2.4e-22 109.0 118 50.8
CSS0034657 Camellia sinensis var. sinensis HOM05D003940 ORTHO05D004461 1.5e-21 106.3 111 57.7
Nitab4.5_0007234g0020 Nicotiana tabacum HOM05D003940 ORTHO05D004461 1.5e-21 106.3 113 57.5
Nitab4.5_0000342g0180 Nicotiana tabacum HOM05D003940 ORTHO05D004461 2.0e-21 105.9 113 56.6
HanXRQChr13g0425481 Helianthus annuus HOM05D003940 ORTHO05D004461 4.5e-21 104.8 112 52.7
Sopen09g032590 Solanum pennellii HOM05D003940 ORTHO05D004461 1.0e-20 103.6 114 52.6
PGSC0003DMG400017255 Solanum tuberosum HOM05D003940 ORTHO05D004461 1.7e-20 102.8 109 54.1
CSS0017531 Camellia sinensis var. sinensis HOM05D003940 ORTHO05D004461 3.8e-20 101.7 90 56.7
Solyc09g089650.1 Solanum lycopersicum HOM05D003940 ORTHO05D004461 1.9e-19 99.4 114 51.8
DCAR_027292 Daucus carota HOM05D003940 ORTHO05D004461 1.6e-18 96.3 114 55.3
DCAR_027293 Daucus carota HOM05D003940 ORTHO05D004461 1.6e-18 96.3 114 55.3
Glyma.20G202600 Glycine max HOM05D003940 ORTHO05D004461 3.5e-18 95.1 86 55.8
Lsat_1_v5_gn_3_122140 Lactuca sativa HOM05D003940 ORTHO05D004461 3.5e-18 95.1 109 49.5
HanXRQChr03g0092241 Helianthus annuus HOM05D003940 ORTHO05D004461 6.0e-18 94.4 103 50.5
Peaxi162Scf00325g00015 Petunia axillaris HOM05D003940 ORTHO05D004461 7.9e-18 94.0 112 50.9
CAN.G738.11 Capsicum annuum HOM05D003940 ORTHO05D004461 1.3e-17 93.2 111 47.7
AUR62002262 Chenopodium quinoa HOM05D003940 ORTHO05D004461 1.3e-17 93.2 91 54.9
Dinv44656 Davidia involucrata HOM05D003940 ORTHO05D004461 1.3e-17 93.2 108 51.9
Glyma.10G188200 Glycine max HOM05D003940 ORTHO05D004461 2.3e-17 92.4 84 57.1
Lj5g0009696 Lotus japonicus HOM05D003940 ORTHO05D004461 3.0e-17 92.0 91 52.7
COL.COLO4_15828 Corchorus olitorius HOM05D003940 ORTHO05D004461 3.9e-17 91.7 109 50.5
Cpa.g.sc44.90 Carica papaya HOM05D003940 ORTHO05D004461 5.1e-17 91.3 105 51.4
Lalb_Chr21g0312371 Lupinus albus HOM05D003940 ORTHO05D004461 5.1e-17 91.3 87 54.0
Duzib212G0271 Durio zibethinus HOM05D003940 ORTHO05D004461 6.7e-17 90.9 89 50.6
Psat6g132880 Pisum sativum HOM05D003940 ORTHO05D004461 6.7e-17 90.9 91 53.8
Duzib151G0370 Durio zibethinus HOM05D003940 ORTHO05D004461 1.1e-16 90.1 104 45.2
TPR.G26431 Trifolium pratense HOM05D006440 ORTHO05D003987 1.1e-16 90.1 90 54.4
AUR62015478 Chenopodium quinoa HOM05D000816 ORTHO05D005265 1.5e-16 89.7 98 50.0
TAR362G0514 Trochodendron aralioides HOM05D003940 ORTHO05D004461 1.5e-16 89.7 108 50.0
Lsat_1_v5_gn_5_72560 Lactuca sativa HOM05D003940 ORTHO05D004461 1.9e-16 89.4 106 50.0
Gohir.D10G154400 Gossypium hirsutum HOM05D003940 ORTHO05D004461 3.3e-16 88.6 109 47.7
Gorai.011G172300 Gossypium raimondii HOM05D003940 ORTHO05D004461 3.3e-16 88.6 109 47.7
Peaxi162Scf00325g00012 Petunia axillaris HOM05D003940 ORTHO05D004461 3.3e-16 88.6 110 50.0
Gohir.A10G112500 Gossypium hirsutum HOM05D003940 ORTHO05D004461 4.3e-16 88.2 109 47.7
EL10Ac3g05913 Beta vulgaris HOM05D003940 ORTHO05D004461 5.7e-16 87.8 90 52.2
Lalb_Chr19g0128361 Lupinus albus HOM05D003940 ORTHO05D004461 7.4e-16 87.4 101 46.5
CAN.G793.6 Capsicum annuum HOM05D003940 ORTHO05D004461 9.7e-16 87.0 115 45.2
Phvul.007G129450 Phaseolus vulgaris HOM05D003940 ORTHO05D004461 9.7e-16 87.0 84 56.0
Ca_09815_v3 Cicer arietinum L. HOM05D003940 ORTHO05D004461 1.3e-15 86.7 91 50.5
Psat6g138240 Pisum sativum HOM05D003940 ORTHO05D004461 1.6e-15 86.3 108 43.5
Thecc.04G250000 Theobroma cacao HOM05D003940 ORTHO05D004461 1.6e-15 86.3 104 46.2
TPR.G15869 Trifolium pratense HOM05D003940 ORTHO05D004461 1.6e-15 86.3 104 43.3
CANSAT78G1835 Cannabis sativa HOM05D003940 ORTHO05D004461 2.8e-15 85.5 115 48.7
GSVIVG01027728001 Vitis vinifera HOM05D000515 ORTHO05D003188 2.8e-15 85.5 84 54.8
Cfa008351 Carpinus fangiana HOM05D003940 ORTHO05D004461 3.7e-15 85.1 91 52.7
Ciclev10006290m.g Citrus clementina HOM05D003940 ORTHO05D004461 3.7e-15 85.1 99 50.5
Gohir.A02G037100 Gossypium hirsutum HOM05D003940 ORTHO05D004461 3.7e-15 85.1 106 46.2
TWI73G0411 Tripterygium wilfordii HOM05D003940 ORTHO05D004461 3.7e-15 85.1 86 53.5
CiPaw.01G188000 Carya illinoinensis HOM05D003940 ORTHO05D004461 4.8e-15 84.7 107 44.9
Haze_11334 Corylus avellana HOM05D003940 ORTHO05D004461 4.8e-15 84.7 90 53.3
Gohir.D02G043800 Gossypium hirsutum HOM05D003940 ORTHO05D004461 4.8e-15 84.7 106 46.2
Sc19g0003500 Simmondsia chinensis HOM05D003940 ORTHO05D004461 4.8e-15 84.7 102 49.0
TAR365G0320 Trochodendron aralioides HOM05D003940 ORTHO05D004461 4.8e-15 84.7 108 46.3
ECA233G6082 Erigeron canadensis HOM05D003940 ORTHO05D004461 1.1e-14 83.6 97 48.5
Gorai.005G048200 Gossypium raimondii HOM05D003940 ORTHO05D004461 1.1e-14 83.6 106 45.3
FvH4_4g03100 Fragaria vesca HOM05D003940 ORTHO05D004461 1.4e-14 83.2 110 50.0
FAN22G2069 Fragaria x ananassa HOM05D003940 ORTHO05D004461 1.8e-14 82.8 110 50.0
Manes.15G038200 Manihot esculenta HOM05D003940 ORTHO05D004461 1.8e-14 82.8 103 46.6
Atru.chr4.2138 Acer truncatum HOM05D003940 ORTHO05D004461 2.4e-14 82.4 109 46.8
FAN12G3937 Fragaria x ananassa HOM05D003940 ORTHO05D004461 3.1e-14 82.0 106 52.8
Prupe.1G034700 Prunus persica HOM05D003940 ORTHO05D004461 4.1e-14 81.6 99 48.5
Sabra10G0034600 Salix brachista HOM05D003940 ORTHO05D004461 5.3e-14 81.3 88 51.1
FAN17G2041 Fragaria x ananassa HOM05D003940 ORTHO05D004461 6.9e-14 80.9 107 49.5
Potri.008G164801 Populus trichocarpa HOM05D003940 ORTHO05D004461 6.9e-14 80.9 88 52.3
Gohir.A09G225100 Gossypium hirsutum HOM05D003940 ORTHO05D004461 1.2e-13 80.1 106 43.4
Gohir.D09G226800 Gossypium hirsutum HOM05D003940 ORTHO05D004461 1.2e-13 80.1 106 43.4
PGR031G1035 Punica granatum HOM05D003940 ORTHO05D004461 1.2e-13 80.1 88 52.3
RcHm_v2.0_Chr4g0391391 Rosa chinensis HOM05D003940 ORTHO05D004461 1.2e-13 80.1 110 47.3
Thhalv10027546m.g Eutrema salsugineum HOM05D003940 ORTHO05D004461 1.5e-13 79.7 102 47.1
Gorai.006G248700 Gossypium raimondii HOM05D003940 ORTHO05D004461 1.5e-13 79.7 106 43.4
TAR636G1753 Trochodendron aralioides HOM05D003940 ORTHO05D004461 1.5e-13 79.7 108 47.2
MD13G1210200 Malus domestica HOM05D003940 ORTHO05D004461 2.0e-13 79.3 107 47.7
CsaV3_3G012380 Cucumis sativus L. HOM05D000244 ORTHO05D000179 2.6e-13 79.0 90 54.4
TAR602G0001 Trochodendron aralioides HOM05D003940 ORTHO05D004461 2.6e-13 79.0 106 47.2
unitig_32.g11714 Utricularia gibba HOM05D003940 ORTHO05D004461 2.6e-13 79.0 113 41.6
Aqoxy5G00265 Aquilegia oxysepala HOM05D003940 ORTHO05D004461 4.5e-13 78.2 113 46.0
AL7G41690 Arabidopsis lyrata HOM05D003940 ORTHO05D004461 4.5e-13 78.2 101 42.6
AT4G14450 Arabidopsis thaliana HOM05D003940 ORTHO05D004461 4.5e-13 78.2 103 43.7
BcaC02g09310 Brassica carinata HOM05D003940 ORTHO05D004461 4.5e-13 78.2 105 47.6
C04p41270 Brassica napus HOM05D003940 ORTHO05D004461 4.5e-13 78.2 105 47.6
BolC4t25705H Brassica oleracea HOM05D003940 ORTHO05D004461 4.5e-13 78.2 105 47.6
A04p07580 Brassica napus HOM05D003940 ORTHO05D004461 5.9e-13 77.8 106 48.1
BraA04t16449Z Brassica rapa HOM05D003940 ORTHO05D004461 7.6e-13 77.4 106 48.1
Glyma.10G008021 Glycine max HOM05D003940 ORTHO05D004461 7.6e-13 77.4 86 48.8
Medtr1g073910 Medicago truncatula HOM05D003940 ORTHO05D004461 7.6e-13 77.4 97 46.4
Aa31LG8G9650 Aethionema arabicum HOM05D003940 ORTHO05D004461 1.0e-12 77.0 106 50.0
CiPaw.02G114800 Carya illinoinensis HOM05D003940 ORTHO05D004461 1.0e-12 77.0 106 48.1
Sc25g0004050 Simmondsia chinensis HOM05D003940 ORTHO05D004461 1.0e-12 77.0 94 50.0
BcaB02g08606 Brassica carinata HOM05D003940 ORTHO05D004461 1.3e-12 76.6 105 45.7
Potri.010G073900 Populus trichocarpa HOM05D003940 ORTHO05D004461 2.2e-12 75.9 102 46.1
Sc13g0005150 Simmondsia chinensis HOM05D003940 ORTHO05D004461 2.2e-12 75.9 90 45.6
Lj6g0004880 Lotus japonicus HOM05D003940 ORTHO05D004461 2.9e-12 75.5 94 50.0
CARHR220660 Cardamine hirsuta HOM05D003940 ORTHO05D004461 3.8e-12 75.1 96 44.8
TWI09G0780 Tripterygium wilfordii HOM05D003940 ORTHO05D004461 5.0e-12 74.7 96 50.0
Medtr1g044125 Medicago truncatula HOM05D003940 ORTHO05D004461 8.5e-12 73.9 99 40.4
Sp7g12530 Schrenkiella parvula HOM05D003940 ORTHO05D004461 8.5e-12 73.9 103 42.7
MD16G1213100 Malus domestica HOM05D003940 ORTHO05D004461 1.9e-11 72.8 115 44.3
PSO210G0601 Papaver somniferum HOM05D003940 ORTHO05D004461 1.9e-11 72.8 87 47.1
Gohir.D09G056900 Gossypium hirsutum HOM05D003940 ORTHO05D004461 2.5e-11 72.4 100 45.0
Gorai.006G070500 Gossypium raimondii HOM05D003940 ORTHO05D004461 2.5e-11 72.4 100 45.0
BcaB06g26449 Brassica carinata HOM05D003940 ORTHO05D004461 3.2e-11 72.0 92 48.9
Nn1g00062 Nelumbo nucifera HOM05D003940 ORTHO05D004461 3.2e-11 72.0 127 40.2
Nn1g02702 Nelumbo nucifera HOM05D003940 ORTHO05D004461 3.2e-11 72.0 127 40.2
Ca_05393_v3 Cicer arietinum L. HOM05D003940 ORTHO05D004461 4.2e-11 71.6 101 41.6
Carub.0007s2777 Capsella rubella HOM05D003940 ORTHO05D004461 7.2e-11 70.9 107 41.1
ClCG05G004480 Citrullus lanatus HOM05D003940 ORTHO05D004461 9.4e-11 70.5 85 51.8
Sed0016632 Sechium edule HOM05D003940 ORTHO05D004461 1.2e-10 70.1 109 45.9
THA.LOC104822808 Tarenaya hassleriana HOM05D003940 ORTHO05D004461 1.2e-10 70.1 92 47.8
Thhalv10021654m.g Eutrema salsugineum HOM05D003940 ORTHO05D004461 1.6e-10 69.7 95 48.4
QL06p016655 Quercus lobata HOM05D003940 ORTHO05D004461 1.6e-10 69.7 100 47.0
SHI00703 Sapria himalayana HOM05D003940 ORTHO05D004461 2.1e-10 69.3 91 47.3
Sed0000021 Sechium edule HOM05D003940 ORTHO05D004461 2.1e-10 69.3 104 45.2
Carub.0003s2339 Capsella rubella HOM05D003940 ORTHO05D004461 2.7e-10 68.9 92 45.7
Gohir.A09G057700 Gossypium hirsutum HOM05D003940 ORTHO05D004461 2.7e-10 68.9 101 43.6
Phvul.007G272100 Phaseolus vulgaris HOM05D003940 ORTHO05D004461 2.7e-10 68.9 89 43.8
Sp1g03140 Schrenkiella parvula HOM05D003940 ORTHO05D004461 2.7e-10 68.9 83 54.2
A07p09330 Brassica napus HOM05D003940 ORTHO05D004461 3.6e-10 68.6 92 44.6
AL1G13930 Arabidopsis lyrata HOM05D003940 ORTHO05D004461 4.6e-10 68.2 83 53.0
AT1G04330 Arabidopsis thaliana HOM05D003940 ORTHO05D004461 4.6e-10 68.2 95 49.5
MELO3C022975.2 Cucumis melo HOM05D003940 ORTHO05D004461 4.6e-10 68.2 126 39.7
Carub.0001s0351 Capsella rubella HOM05D003940 ORTHO05D004461 6.1e-10 67.8 95 47.4
Eucgr.H03139 Eucalyptus grandis HOM05D003940 ORTHO05D004461 6.1e-10 67.8 103 42.7
THA.LOC104808609 Tarenaya hassleriana HOM05D003940 ORTHO05D004461 6.1e-10 67.8 102 47.1
VMungo0720G0726 Vigna mungo HOM05D003940 ORTHO05D004461 7.9e-10 67.4 89 43.8
C07p14380 Brassica napus HOM05D003940 ORTHO05D004461 1.0e-09 67.0 92 46.7
BolC7t41935H Brassica oleracea HOM05D003940 ORTHO05D004461 1.0e-09 67.0 92 46.7
BraA07t28731Z Brassica rapa HOM05D003940 ORTHO05D004461 1.0e-09 67.0 92 44.6
CARHR003650 Cardamine hirsuta HOM05D003940 ORTHO05D004461 1.0e-09 67.0 80 55.0
Thhalv10009178m.g Eutrema salsugineum HOM05D003940 ORTHO05D004461 2.3e-09 65.9 83 49.4
ClCG06G006840 Citrullus lanatus HOM05D003940 ORTHO05D004461 3.0e-09 65.5 94 46.8
THA.LOC104822248 Tarenaya hassleriana HOM05D003940 ORTHO05D004461 3.0e-09 65.5 106 44.3
AL3G37790 Arabidopsis lyrata HOM05D003940 ORTHO05D004461 5.1e-09 64.7 104 43.3
AT3G23170 Arabidopsis thaliana HOM05D003940 ORTHO05D004461 5.1e-09 64.7 101 46.5
BcaC07g42173 Brassica carinata HOM05D003940 ORTHO05D004461 6.7e-09 64.3 87 48.3
BcaC07g42193 Brassica carinata HOM05D003940 ORTHO05D004461 6.7e-09 64.3 87 48.3
PGR004G1022 Punica granatum HOM05D003940 ORTHO05D004461 6.7e-09 64.3 101 41.6
Sp3g20820 Schrenkiella parvula HOM05D003940 ORTHO05D004461 6.7e-09 64.3 88 45.5
MBI18_g43342_MAGBIO Magnolia biondii HOM05D003940 ORTHO05D004461 8.8e-09 63.9 105 36.2
TWI53G1738 Tripterygium wilfordii HOM05D003940 ORTHO05D004461 1.1e-08 63.5 85 48.2
TWI53G1893 Tripterygium wilfordii HOM05D003940 ORTHO05D004461 1.1e-08 63.5 85 48.2
C05p02510 Brassica napus HOM05D003940 ORTHO05D004461 1.5e-08 63.2 83 49.4
Aqoxy2G03616 Aquilegia oxysepala HOM05D003940 ORTHO05D004461 1.9e-08 62.8 98 43.9
BcaC05g24452 Brassica carinata HOM05D003940 ORTHO05D004461 1.9e-08 62.8 83 42.2
BolC5t29030H Brassica oleracea HOM05D003940 ORTHO05D004461 1.9e-08 62.8 83 49.4
CsaV3_2G012950 Cucumis sativus L. HOM05D003940 ORTHO05D004461 2.5e-08 62.4 103 40.8
FvH4_7g33480 Fragaria vesca HOM05D003940 ORTHO05D004461 2.5e-08 62.4 81 46.9
A10p02740 Brassica napus HOM05D003940 ORTHO05D004461 4.3e-08 61.6 83 45.8
BraA03t13459Z Brassica rapa HOM05D003940 ORTHO05D004461 4.3e-08 61.6 107 43.9
BraA10t42542Z Brassica rapa HOM05D003940 ORTHO05D004461 4.3e-08 61.6 83 45.8
A03p43180 Brassica napus HOM05D003940 ORTHO05D004461 7.4e-08 60.8 103 46.6
CARHR099110 Cardamine hirsuta HOM05D003940 ORTHO05D004461 7.4e-08 60.8 91 45.1
Manes.03G167050 Manihot esculenta HOM05D003940 ORTHO05D004461 2.8e-07 58.9 101 39.6
Nn3g19606 Nelumbo nucifera HOM05D003940 ORTHO05D004461 2.8e-07 58.9 126 38.9
Sed0008236 Sechium edule HOM05D003940 ORTHO05D004461 1.1e-06 57.0 77 49.4
PGSC0003DMG400013448 Solanum tuberosum HOM05D003940 ORTHO05D004461 1.4e-06 56.6 44 63.6
HPP92_025972 Vanilla planifolia HOM05D027912 ORTHO05D004461 1.8e-06 56.2 82 40.2


User provided reference genes

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