Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu025545.1 Olea europaea HOM05D002850 ORTHO05D036534 2.1e-49 198.7 101 100.0
Oeu014949.1 Olea europaea HOM05D002850 ORTHO05D003285 3.2e-26 121.7 116 62.9
Oeu021389.1 Olea europaea HOM05D002850 ORTHO05D036534 5.3e-21 104.4 106 60.4
Oeu047389.1 Olea europaea HOM05D002850 ORTHO05D003285 1.5e-15 86.3 107 54.2
VMungo0720G0363 Vigna mungo HOM05D002850 ORTHO05D003285 1.5e-15 86.3 101 49.5
Phvul.007G215200 Phaseolus vulgaris HOM05D002850 ORTHO05D003285 4.4e-15 84.7 104 48.1
Rhsim01G0290100 Rhododendron simsii HOM05D002850 ORTHO05D003285 5.7e-15 84.3 121 47.9
Glyma.10G014000 Glycine max HOM05D002850 ORTHO05D003285 1.3e-14 83.2 101 47.5
SalBow3G2453 Salvia bowleyana HOM05D002850 ORTHO05D003285 1.3e-14 83.2 103 51.5
Hma1.2p1_0212F.1_g090020 Hydrangea macrophylla HOM05D002850 ORTHO05D003285 2.8e-14 82.0 111 45.9
Oeu008462.1 Olea europaea HOM05D002850 ORTHO05D003285 2.8e-14 82.0 123 43.9
Glyma.03G218600 Glycine max HOM05D002850 ORTHO05D003285 6.3e-14 80.9 116 47.4
Glyma.02G013402 Glycine max HOM05D002850 ORTHO05D003285 8.2e-14 80.5 102 46.1
Glyma.19G215400 Glycine max HOM05D002850 ORTHO05D003285 2.4e-13 79.0 122 42.6
Actinidia21005 Actinidia chinensis HOM05D002850 ORTHO05D003285 7.0e-13 77.4 115 45.2
Actinidia25842 Actinidia chinensis HOM05D002850 ORTHO05D003285 1.6e-12 76.3 119 46.2
Lj1A18T24 Lonicera japonica HOM05D002850 ORTHO05D003285 1.6e-12 76.3 125 42.4
arahy.Tifrunner.gnm1.ann1.4335NN Arachis hypogaea HOM05D002850 ORTHO05D003285 2.0e-12 75.9 101 47.5
TWI36G0680 Tripterygium wilfordii HOM05D002850 ORTHO05D003285 2.6e-12 75.5 116 44.0
GSVIVG01028103001 Vitis vinifera HOM05D002850 ORTHO05D003285 3.5e-12 75.1 111 45.0
Actinidia27611 Actinidia chinensis HOM05D002850 ORTHO05D003285 4.5e-12 74.7 104 47.1
MSTRG.18110 Avicennia marina HOM05D002850 ORTHO05D003285 4.5e-12 74.7 115 42.6
Dinv10082 Davidia involucrata HOM05D002850 ORTHO05D003285 5.9e-12 74.3 108 45.4
Lj1g0007373 Lotus japonicus HOM05D002850 ORTHO05D003285 5.9e-12 74.3 123 43.9
Dinv33108 Davidia involucrata HOM05D002850 ORTHO05D003285 7.7e-12 73.9 116 41.4
Migut.D00091 Erythranthe guttata HOM05D002850 ORTHO05D003285 1.0e-11 73.6 127 40.2
MSTRG.21678 Avicennia marina HOM05D002850 ORTHO05D003285 1.3e-11 73.2 126 43.7
VMungo1383G1878 Vigna mungo HOM05D002850 ORTHO05D003285 2.2e-11 72.4 102 46.1
arahy.Tifrunner.gnm1.ann1.LG3T8V Arachis hypogaea HOM05D002850 ORTHO05D003285 2.9e-11 72.0 101 45.5
HanXRQChr06g0167841 Helianthus annuus HOM05D002850 ORTHO05D003285 5.0e-11 71.2 107 42.1
Lalb_Chr15g0078311 Lupinus albus HOM05D002850 ORTHO05D003285 6.5e-11 70.9 123 41.5
Gohir.A11G110100 Gossypium hirsutum HOM05D002850 ORTHO05D003285 8.5e-11 70.5 120 41.7
Lalb_Chr18g0046781 Lupinus albus HOM05D002850 ORTHO05D003285 8.5e-11 70.5 125 40.8
Potri.014G122300 Populus trichocarpa HOM05D002850 ORTHO05D003285 8.5e-11 70.5 128 42.2
Aa31LG5G1740 Aethionema arabicum HOM05D002850 ORTHO05D003285 1.1e-10 70.1 104 41.3
Lalb_Chr02g0146761 Lupinus albus HOM05D002850 ORTHO05D003285 1.1e-10 70.1 103 45.6
DCAR_005770 Daucus carota HOM05D002850 ORTHO05D003285 1.5e-10 69.7 119 42.9
Gohir.D11G115300 Gossypium hirsutum HOM05D002850 ORTHO05D003285 1.5e-10 69.7 119 41.2
CiPaw.08G090900 Carya illinoinensis HOM05D002850 ORTHO05D003285 2.5e-10 68.9 112 43.8
Ca_09203_v3 Cicer arietinum L. HOM05D002850 ORTHO05D003285 2.5e-10 68.9 118 43.2
Gorai.007G123400 Gossypium raimondii HOM05D002850 ORTHO05D003285 2.5e-10 68.9 119 41.2
ECA236G5024 Erigeron canadensis HOM05D002850 ORTHO05D003285 3.2e-10 68.6 110 42.7
Sed0009776 Sechium edule HOM05D002850 ORTHO05D003285 3.2e-10 68.6 129 39.5
unitig_60.g25657 Utricularia gibba HOM05D002850 ORTHO05D003285 3.2e-10 68.6 95 43.2
Manes.01G226700 Manihot esculenta HOM05D002850 ORTHO05D003285 4.2e-10 68.2 127 39.4
arahy.Tifrunner.gnm1.ann1.2IHJ4M Arachis hypogaea HOM05D002850 ORTHO05D003285 5.5e-10 67.8 101 46.5
Phvul.001G212000 Phaseolus vulgaris HOM05D002850 ORTHO05D003285 7.2e-10 67.4 134 38.8
SalBow2G3579 Salvia bowleyana HOM05D002850 ORTHO05D003285 7.2e-10 67.4 101 44.6
Lsat_1_v5_gn_9_3020 Lactuca sativa HOM05D002850 ORTHO05D003285 9.4e-10 67.0 117 41.9
Potri.002G197300 Populus trichocarpa HOM05D002850 ORTHO05D003285 9.4e-10 67.0 118 38.1
QL12p020290 Quercus lobata HOM05D002850 ORTHO05D003285 9.4e-10 67.0 102 44.1
SGA_v2.0_scaffold198G41124 Striga asiatica HOM05D002850 ORTHO05D003285 9.4e-10 67.0 102 42.2
SGA_v2.0_scaffold334G49059 Striga asiatica HOM05D002850 ORTHO05D003285 9.4e-10 67.0 121 38.8
PGR119G0920 Punica granatum HOM05D002850 ORTHO05D003285 1.2e-09 66.6 116 38.8
CSS0004585 Camellia sinensis var. sinensis HOM05D002850 ORTHO05D003285 1.6e-09 66.2 118 39.8
CSS0016763 Camellia sinensis var. sinensis HOM05D002850 ORTHO05D003285 1.6e-09 66.2 118 39.8
Duzib133G1453 Durio zibethinus HOM05D002850 ORTHO05D003285 2.1e-09 65.9 131 38.9
Gohir.A12G126100 Gossypium hirsutum HOM05D002850 ORTHO05D003285 2.1e-09 65.9 120 40.8
THA.LOC104817463 Tarenaya hassleriana HOM05D002850 ORTHO05D003285 2.1e-09 65.9 117 41.0
TPR.G19778 Trifolium pratense HOM05D002850 ORTHO05D003285 2.1e-09 65.9 129 36.4
Gorai.008G140700 Gossypium raimondii HOM05D002850 ORTHO05D003285 2.7e-09 65.5 120 40.8
Lalb_Chr06g0166811 Lupinus albus HOM05D002850 ORTHO05D003285 2.7e-09 65.5 109 43.1
CiPaw.07G116100 Carya illinoinensis HOM05D002850 ORTHO05D003285 3.6e-09 65.1 126 38.1
Haze_05022 Corylus avellana HOM05D002850 ORTHO05D003285 3.6e-09 65.1 114 38.6
Haze_05026 Corylus avellana HOM05D002850 ORTHO05D003285 3.6e-09 65.1 114 38.6
HanXRQChr15g0464171 Helianthus annuus HOM05D002850 ORTHO05D003285 3.6e-09 65.1 105 41.9
AL6G51130 Arabidopsis lyrata HOM05D002850 ORTHO05D003285 4.7e-09 64.7 102 40.2
Lj5g0008118 Lotus japonicus HOM05D002850 ORTHO05D003285 4.7e-09 64.7 125 39.2
Gohir.D12G129600 Gossypium hirsutum HOM05D002850 ORTHO05D003285 6.1e-09 64.3 119 42.0
Peaxi162Scf00001g10217 Petunia axillaris HOM05D002850 ORTHO05D003285 6.1e-09 64.3 134 39.6
SGA_v2.0_scaffold376G50273 Striga asiatica HOM05D002850 ORTHO05D003285 6.1e-09 64.3 125 38.4
Medtr7g109360 Medicago truncatula HOM05D002850 ORTHO05D003285 8.0e-09 63.9 121 39.7
Sabra14G0090700 Salix brachista HOM05D002850 ORTHO05D003285 8.0e-09 63.9 127 39.4
THA.LOC104802196 Tarenaya hassleriana HOM05D002850 ORTHO05D003285 8.0e-09 63.9 106 39.6
Carub.0006s3512 Capsella rubella HOM05D002850 ORTHO05D003285 1.4e-08 63.2 101 37.6
Cc01_g21290 Coffea canephora HOM05D002850 ORTHO05D003285 1.4e-08 63.2 124 39.5
Gohir.A08G119100 Gossypium hirsutum HOM05D002850 ORTHO05D003285 1.4e-08 63.2 117 41.9
AL4G47000 Arabidopsis lyrata HOM05D002850 ORTHO05D003285 1.8e-08 62.8 104 41.3
CARHR142830 Cardamine hirsuta HOM05D002850 ORTHO05D003285 1.8e-08 62.8 111 39.6
Cfa005816 Carpinus fangiana HOM05D002850 ORTHO05D003285 1.8e-08 62.8 109 40.4
Sabra02G0160200 Salix brachista HOM05D002850 ORTHO05D003285 1.8e-08 62.8 129 38.8
TWI18G0577 Tripterygium wilfordii HOM05D002850 ORTHO05D003285 2.3e-08 62.4 120 38.3
Aa31LG1G28750 Aethionema arabicum HOM05D002850 ORTHO05D003285 3.0e-08 62.0 113 41.6
Medtr1g087270 Medicago truncatula HOM05D002850 ORTHO05D003285 4.0e-08 61.6 139 36.0
Psat3g020200 Pisum sativum HOM05D002850 ORTHO05D003285 6.7e-08 60.8 134 32.1
BcaC01g06776 Brassica carinata HOM05D002850 ORTHO05D003285 1.1e-07 60.1 101 42.6
A03p31240 Brassica napus HOM05D002850 ORTHO05D003285 1.1e-07 60.1 101 42.6
DCAR_002903 Daucus carota HOM05D002850 ORTHO05D003285 1.1e-07 60.1 131 37.4
C03p38080 Brassica napus HOM05D002850 ORTHO05D003285 1.5e-07 59.7 101 42.6
Thhalv10001383m.g Eutrema salsugineum HOM05D002850 ORTHO05D003285 1.5e-07 59.7 115 39.1
TPR.G20289 Trifolium pratense HOM05D002850 ORTHO05D003285 1.5e-07 59.7 128 32.8
CDE02G1279 Ceratophyllum demersum HOM05D002850 ORTHO05D003285 2.0e-07 59.3 110 34.5
Thhalv10005872m.g Eutrema salsugineum HOM05D002850 ORTHO05D003285 2.0e-07 59.3 108 40.7
Gohir.D07G132100 Gossypium hirsutum HOM05D002850 ORTHO05D003285 2.0e-07 59.3 132 37.1
Gorai.001G143300 Gossypium raimondii HOM05D002850 ORTHO05D003285 2.0e-07 59.3 132 37.1
MBI18_g28450_MAGBIO Magnolia biondii HOM05D002850 ORTHO05D003285 2.0e-07 59.3 125 35.2
BolC3t16095H Brassica oleracea HOM05D002850 ORTHO05D003285 2.6e-07 58.9 101 40.6
BraA03t12304Z Brassica rapa HOM05D002850 ORTHO05D003285 2.6e-07 58.9 101 40.6
CSS0010263 Camellia sinensis var. sinensis HOM05D002850 ORTHO05D003285 2.6e-07 58.9 113 40.7
PSO170G6339 Papaver somniferum HOM05D002850 ORTHO05D003285 2.6e-07 58.9 141 34.8
Sp6g01990 Schrenkiella parvula HOM05D002850 ORTHO05D003285 2.6e-07 58.9 101 41.6
Ciclev10019452m.g Citrus clementina HOM05D002850 ORTHO05D003285 3.3e-07 58.5 130 33.8
AT4G02100 Arabidopsis thaliana HOM05D002850 ORTHO05D003285 4.4e-07 58.2 103 40.8
arahy.Tifrunner.gnm1.ann1.S4HK2G Arachis hypogaea HOM05D002850 ORTHO05D003285 4.4e-07 58.2 139 31.7
vmacro15116 Vaccinium macrocarpon HOM05D002850 ORTHO05D003285 4.4e-07 58.2 108 41.7
Cpa.g.sc18.24 Carica papaya HOM05D002850 ORTHO05D003285 5.7e-07 57.8 41 65.9
Gohir.A07G127700 Gossypium hirsutum HOM05D002850 ORTHO05D003285 5.7e-07 57.8 128 37.5
MD11G1316100 Malus domestica HOM05D002850 ORTHO05D003285 5.7e-07 57.8 132 35.6
Manes.05G002400 Manihot esculenta HOM05D002850 ORTHO05D003285 5.7e-07 57.8 124 35.5
TAR633G1885 Trochodendron aralioides HOM05D002850 ORTHO05D003285 5.7e-07 57.8 130 35.4
BraA05t19046Z Brassica rapa HOM05D002850 ORTHO05D003285 7.5e-07 57.4 127 35.4
C04p00430 Brassica napus HOM05D002850 ORTHO05D003285 9.7e-07 57.0 127 35.4
Nn3g21653 Nelumbo nucifera HOM05D002850 ORTHO05D003285 9.7e-07 57.0 138 32.6
BcaB01g02420 Brassica carinata HOM05D002850 ORTHO05D003285 1.3e-06 56.6 101 40.6
CDE12G0523 Ceratophyllum demersum HOM05D002850 ORTHO05D003285 1.3e-06 56.6 79 43.0
PSO357G0318 Papaver somniferum HOM05D002850 ORTHO05D003285 1.3e-06 56.6 141 32.6
Sp5g00930 Schrenkiella parvula HOM05D002850 ORTHO05D003285 1.3e-06 56.6 105 40.0
AT2G47440 Arabidopsis thaliana HOM05D002850 ORTHO05D003285 1.7e-06 56.2 103 37.9
arahy.Tifrunner.gnm1.ann1.UJ0Y8W Arachis hypogaea HOM05D002850 ORTHO05D003285 1.7e-06 56.2 139 31.7
BcaC02g12579 Brassica carinata HOM05D002850 ORTHO05D003285 1.7e-06 56.2 127 35.4
Eucgr.H01056 Eucalyptus grandis HOM05D002850 ORTHO05D003285 1.7e-06 56.2 135 35.6
A05p00480 Brassica napus HOM05D002850 ORTHO05D003285 2.2e-06 55.8 126 34.1
Hund02935 Selenicereus undatus HOM05D002850 ORTHO05D003285 2.8e-06 55.5 116 34.5
CARHR172820 Cardamine hirsuta HOM05D002850 ORTHO05D003285 3.7e-06 55.1 104 37.5
BcaNung06528 Brassica carinata HOM05D002850 ORTHO05D003285 4.8e-06 54.7 111 35.1
TAR362G0654 Trochodendron aralioides HOM05D002850 ORTHO05D003285 4.8e-06 54.7 36 69.4
BcaC07g42767 Brassica carinata HOM05D002850 ORTHO05D003285 6.3e-06 54.3 104 34.6
C08p37330 Brassica napus HOM05D002850 ORTHO05D003285 6.3e-06 54.3 104 35.6
BolC8t51311H Brassica oleracea HOM05D002850 ORTHO05D003285 6.3e-06 54.3 104 35.6
Ca_10291_v3 Cicer arietinum L. HOM05D002850 ORTHO05D003285 6.3e-06 54.3 139 33.1
Eucgr.K03539 Eucalyptus grandis HOM05D002850 ORTHO05D003285 6.3e-06 54.3 123 33.3
Psat6g162280 Pisum sativum HOM05D002850 ORTHO05D003285 6.3e-06 54.3 131 32.1
Sed0009669 Sechium edule HOM05D002850 ORTHO05D003285 6.3e-06 54.3 49 55.1
Thecc.01G311400 Theobroma cacao HOM05D002850 ORTHO05D003285 6.3e-06 54.3 131 35.9
A09p54440 Brassica napus HOM05D002850 ORTHO05D003285 8.2e-06 53.9 104 34.6
ECA247G2562 Erigeron canadensis HOM05D002850 ORTHO05D003285 8.2e-06 53.9 110 38.2
Thhalv10028558m.g Eutrema salsugineum HOM05D002850 ORTHO05D003285 8.2e-06 53.9 104 36.5
Nn4g25636 Nelumbo nucifera HOM05D002850 ORTHO05D003285 8.2e-06 53.9 36 69.4
unitig_90.g27439 Utricularia gibba HOM05D002850 ORTHO05D003285 8.2e-06 53.9 87 40.2


User provided reference genes

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