Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu025521.1 Olea europaea HOM05D005065 ORTHO05D005944 1.8e-96 355.9 181 100.0
Oeu021210.1 Olea europaea HOM05D005065 ORTHO05D005944 2.7e-68 262.3 183 78.7
Oeu017883.1 Olea europaea HOM05D005065 ORTHO05D005944 4.7e-28 128.6 170 51.2
MSTRG.25443 Avicennia marina HOM05D005065 ORTHO05D005944 5.8e-26 121.7 212 45.3
Oeu029996.1 Olea europaea HOM05D005065 ORTHO05D005944 5.8e-26 121.7 181 53.0
Dinv41716 Davidia involucrata HOM05D005065 ORTHO05D005944 2.4e-24 116.3 140 49.3
Actinidia02576 Actinidia chinensis HOM05D005065 ORTHO05D005944 3.2e-24 115.9 156 50.6
Nitab4.5_0009211g0010 Nicotiana tabacum HOM05D005065 ORTHO05D005944 1.6e-23 113.6 140 57.9
Dinv15081 Davidia involucrata HOM05D005065 ORTHO05D005944 2.1e-23 113.2 155 48.4
Actinidia23336 Actinidia chinensis HOM05D005065 ORTHO05D005944 1.0e-22 110.9 143 48.3
Gohir.A05G275300 Gossypium hirsutum HOM05D005065 ORTHO05D005944 1.3e-22 110.5 157 43.9
Lalb_Chr21g0305721 Lupinus albus HOM05D005065 ORTHO05D005944 2.3e-22 109.8 167 47.3
Hma1.2p1_0937F.1_g239030 Hydrangea macrophylla HOM05D005065 ORTHO05D005944 6.6e-22 108.2 158 48.1
DCAR_011533 Daucus carota HOM05D005065 ORTHO05D005944 1.1e-21 107.5 160 46.2
HanXRQChr04g0107491 Helianthus annuus HOM05D005065 ORTHO05D005944 1.5e-21 107.1 158 44.9
Potri.013G111700 Populus trichocarpa HOM05D005065 ORTHO05D005944 1.9e-21 106.7 152 42.1
Thecc.08G184600 Theobroma cacao HOM05D005065 ORTHO05D005944 2.5e-21 106.3 162 45.1
Peaxi162Scf00268g00105 Petunia axillaris HOM05D005065 ORTHO05D005944 3.3e-21 105.9 193 47.2
Cc00_g13630 Coffea canephora HOM05D005065 ORTHO05D005944 4.3e-21 105.5 193 45.6
Glyma.10G217400 Glycine max HOM05D005065 ORTHO05D005944 5.6e-21 105.1 190 44.2
SalBow7G0321 Salvia bowleyana HOM05D005065 ORTHO05D005944 7.3e-21 104.8 196 44.9
MSTRG.1526 Avicennia marina HOM05D005065 ORTHO05D005944 1.2e-20 104.0 205 42.4
Rhsim06G0094100 Rhododendron simsii HOM05D005065 ORTHO05D005944 1.2e-20 104.0 152 45.4
MSTRG.22454 Avicennia marina HOM05D005065 ORTHO05D005944 1.6e-20 103.6 192 44.3
Cfa013844 Carpinus fangiana HOM05D005065 ORTHO05D005944 1.6e-20 103.6 170 45.3
Lalb_Chr02g0141751 Lupinus albus HOM05D005065 ORTHO05D005944 1.6e-20 103.6 130 47.7
Nitab4.5_0000277g0040 Nicotiana tabacum HOM05D005065 ORTHO05D005944 2.8e-20 102.8 142 48.6
Duzib211G0507 Durio zibethinus HOM05D005065 ORTHO05D005944 3.6e-20 102.4 173 46.8
Gohir.D05G277400 Gossypium hirsutum HOM05D005065 ORTHO05D005944 6.2e-20 101.7 194 40.2
Migut.C01259 Erythranthe guttata HOM05D005065 ORTHO05D005944 8.1e-20 101.3 204 44.6
Peaxi162Scf01013g00001 Petunia axillaris HOM05D005065 ORTHO05D005944 1.4e-19 100.5 184 43.5
PGSC0003DMG400026113 Solanum tuberosum HOM05D005065 ORTHO05D005944 1.8e-19 100.1 183 45.9
PGR042G0986 Punica granatum HOM05D005065 ORTHO05D005944 2.3e-19 99.8 159 45.3
Gorai.009G290400 Gossypium raimondii HOM05D005065 ORTHO05D005944 6.8e-19 98.2 194 39.7
Manes.18G101500 Manihot esculenta HOM05D005065 ORTHO05D005944 6.8e-19 98.2 187 40.1
Glyma.20G174600 Glycine max HOM05D005065 ORTHO05D005944 1.5e-18 97.1 139 45.3
Hma1.2p1_0060F.1_g032900 Hydrangea macrophylla HOM05D005065 ORTHO05D005944 1.5e-18 97.1 175 44.0
Lalb_Chr06g0162001 Lupinus albus HOM05D005065 ORTHO05D005944 2.6e-18 96.3 171 44.4
VMungo0720G1099 Vigna mungo HOM05D005065 ORTHO05D005944 2.6e-18 96.3 175 43.4
Gohir.A13G121100 Gossypium hirsutum HOM05D005065 ORTHO05D005944 3.4e-18 95.9 159 43.4
Ca_10622_v3 Cicer arietinum L. HOM05D005065 ORTHO05D005944 5.8e-18 95.1 182 44.0
Eucgr.F02608 Eucalyptus grandis HOM05D005065 ORTHO05D005944 5.8e-18 95.1 179 40.8
Lalb_Chr03g0036131 Lupinus albus HOM05D005065 ORTHO05D005944 5.8e-18 95.1 160 45.0
Sabra13G0095100 Salix brachista HOM05D005065 ORTHO05D005944 9.9e-18 94.4 147 44.2
Lsat_1_v5_gn_1_10621 Lactuca sativa HOM05D005065 ORTHO05D005944 1.3e-17 94.0 137 44.5
Duzib177G1167 Durio zibethinus HOM05D005065 ORTHO05D005944 1.7e-17 93.6 176 43.2
Rhsim11G0058500 Rhododendron simsii HOM05D005065 ORTHO05D005944 2.2e-17 93.2 133 45.1
Phvul.007G088700 Phaseolus vulgaris HOM05D005065 ORTHO05D005944 2.9e-17 92.8 201 38.3
TPR.G8826 Trifolium pratense HOM05D005065 ORTHO05D005944 2.9e-17 92.8 188 38.8
Cpa.g.sc66.33 Carica papaya HOM05D005065 ORTHO05D005944 3.7e-17 92.4 188 42.0
Lalb_Chr01g0010191 Lupinus albus HOM05D005065 ORTHO05D005944 3.7e-17 92.4 168 41.7
CAN.G199.8 Capsicum annuum HOM05D005065 ORTHO05D005944 4.9e-17 92.0 165 39.4
Haze_22517 Corylus avellana HOM05D005065 ORTHO05D005944 4.9e-17 92.0 172 41.9
Solyc11g018710.1 Solanum lycopersicum HOM05D005065 ORTHO05D005944 6.4e-17 91.7 174 40.8
CiPaw.08G058800 Carya illinoinensis HOM05D005065 ORTHO05D005944 8.3e-17 91.3 160 39.4
Gohir.D13G125200 Gossypium hirsutum HOM05D005065 ORTHO05D005944 8.3e-17 91.3 157 43.3
Gorai.013G140100 Gossypium raimondii HOM05D005065 ORTHO05D005944 8.3e-17 91.3 157 43.3
CiPaw.07G160300 Carya illinoinensis HOM05D005065 ORTHO05D005944 1.4e-16 90.5 168 42.3
Lsat_1_v5_gn_6_109661 Lactuca sativa HOM05D005065 ORTHO05D005944 1.4e-16 90.5 134 42.5
Potri.019G082866 Populus trichocarpa HOM05D005065 ORTHO05D005944 1.4e-16 90.5 156 40.4
Solyc06g065340.1 Solanum lycopersicum HOM05D005065 ORTHO05D005944 3.2e-16 89.4 186 44.1
Sopen11g009740 Solanum pennellii HOM05D005065 ORTHO05D005944 4.1e-16 89.0 174 40.8
PGSC0003DMG400014033 Solanum tuberosum HOM05D005065 ORTHO05D005944 4.1e-16 89.0 163 42.3
Ciclev10002433m.g Citrus clementina HOM05D005065 ORTHO05D005944 7.1e-16 88.2 146 41.1
Manes.02G192500 Manihot esculenta HOM05D005065 ORTHO05D005944 1.2e-15 87.4 174 41.4
BcaB03g14918 Brassica carinata HOM05D005065 ORTHO05D005944 1.6e-15 87.0 186 40.3
MELO3C008125.2 Cucumis melo HOM05D005065 ORTHO05D005944 1.6e-15 87.0 164 38.4
TWI60G1480 Tripterygium wilfordii HOM05D005065 ORTHO05D005944 1.6e-15 87.0 181 37.0
CSS0016137 Camellia sinensis var. sinensis HOM05D005065 ORTHO05D005944 2.7e-15 86.3 170 40.6
QL02p033454 Quercus lobata HOM05D005065 ORTHO05D005944 3.5e-15 85.9 164 39.0
Sabra19G0094300 Salix brachista HOM05D005065 ORTHO05D005944 4.6e-15 85.5 138 43.5
EL10Ac1g00090 Beta vulgaris HOM05D005065 ORTHO05D005944 1.3e-14 84.0 134 45.5
Sopen06g023830 Solanum pennellii HOM05D005065 ORTHO05D005944 1.3e-14 84.0 184 41.8
Prupe.8G058900 Prunus persica HOM05D005065 ORTHO05D005944 1.7e-14 83.6 183 36.1
ClCG11G008090 Citrullus lanatus HOM05D005065 ORTHO05D005944 3.0e-14 82.8 160 38.8
HanXRQChr05g0150531 Helianthus annuus HOM05D005065 ORTHO05D005944 3.0e-14 82.8 166 39.8
THA.LOC104800116 Tarenaya hassleriana HOM05D005065 ORTHO05D005944 3.0e-14 82.8 199 38.2
Lalb_Chr19g0129461 Lupinus albus HOM05D005065 ORTHO05D005944 3.9e-14 82.4 172 37.8
AT1G22680 Arabidopsis thaliana HOM05D005065 ORTHO05D005944 5.1e-14 82.0 162 41.4
MD05G1042300 Malus domestica HOM05D005065 ORTHO05D005944 8.6e-14 81.3 206 35.4
Sp1g20190 Schrenkiella parvula HOM05D005065 ORTHO05D005944 1.1e-13 80.9 155 43.2
A07p30470 Brassica napus HOM05D005065 ORTHO05D005944 1.9e-13 80.1 177 41.8
BraA07t30683Z Brassica rapa HOM05D005065 ORTHO05D005944 1.9e-13 80.1 177 41.8
Lj5g0001381 Lotus japonicus HOM05D005065 ORTHO05D005944 4.3e-13 79.0 176 37.5
Psat6g187880 Pisum sativum HOM05D005065 ORTHO05D005944 4.3e-13 79.0 190 35.8
SGA_v2.0_scaffold149G36582 Striga asiatica HOM05D005065 ORTHO05D005944 4.3e-13 79.0 174 40.8
AL1G36220 Arabidopsis lyrata HOM05D005065 ORTHO05D005944 5.6e-13 78.6 151 43.0
Eucgr.F04121 Eucalyptus grandis HOM05D005065 ORTHO05D005944 5.6e-13 78.6 132 43.2
Carub.0001s2220 Capsella rubella HOM05D005065 ORTHO05D005944 7.3e-13 78.2 172 39.0
Nn1g08370 Nelumbo nucifera HOM05D005065 ORTHO05D005944 7.3e-13 78.2 177 38.4
Nitab4.5_0002483g0030 Nicotiana tabacum HOM05D005065 ORTHO05D005944 7.3e-13 78.2 85 55.3
Rhsim11G0058400 Rhododendron simsii HOM05D005065 ORTHO05D005944 9.6e-13 77.8 102 45.1
RcHm_v2.0_Chr6g0270871 Rosa chinensis HOM05D005065 ORTHO05D005944 1.6e-12 77.0 174 35.1
BcaB03g15639 Brassica carinata HOM05D005065 ORTHO05D005944 2.1e-12 76.6 188 37.2
BcaB05g24697 Brassica carinata HOM05D005065 ORTHO05D005944 2.1e-12 76.6 185 37.3
CARHR064790 Cardamine hirsuta HOM05D005065 ORTHO05D005944 2.1e-12 76.6 190 38.4
FAN15G3279 Fragaria x ananassa HOM05D005065 ORTHO05D005944 2.1e-12 76.6 179 37.4
Ah.05g178140 Amaranthus hybridus HOM05D005065 ORTHO05D005944 2.8e-12 76.3 163 41.1
AT1G71970 Arabidopsis thaliana HOM05D005065 ORTHO05D005944 2.8e-12 76.3 175 37.7
SGA_v2.0_scaffold24G10554 Striga asiatica HOM05D005065 ORTHO05D005944 3.6e-12 75.9 162 38.3
C06p35230 Brassica napus HOM05D005065 ORTHO05D005944 6.2e-12 75.1 180 37.8
TAR624G0039 Trochodendron aralioides HOM05D005065 ORTHO05D005944 8.1e-12 74.7 169 34.9
CARHR023050 Cardamine hirsuta HOM05D005065 ORTHO05D005944 1.1e-11 74.3 150 42.0
Sed0021334 Sechium edule HOM05D005065 ORTHO05D005944 1.1e-11 74.3 154 35.7
AL2G31580 Arabidopsis lyrata HOM05D005065 ORTHO05D005944 1.8e-11 73.6 175 37.1
BcaC08g46641 Brassica carinata HOM05D005065 ORTHO05D005944 1.8e-11 73.6 181 38.1
Atru.chr13.1737 Acer truncatum HOM05D005065 ORTHO05D005944 2.4e-11 73.2 156 35.3
C06p46070 Brassica napus HOM05D005065 ORTHO05D005944 2.4e-11 73.2 179 38.5
SGA_v2.0_scaffold118G32491 Striga asiatica HOM05D005065 ORTHO05D005944 2.4e-11 73.2 171 40.4
Nn5g27677 Nelumbo nucifera HOM05D005065 ORTHO05D005944 3.1e-11 72.8 160 36.2
BraA07t31379Z Brassica rapa HOM05D005065 ORTHO05D005944 6.8e-11 71.6 189 34.9
BolC6t39660H Brassica oleracea HOM05D005065 ORTHO05D005944 1.2e-10 70.9 179 38.0
BolC6t38629H Brassica oleracea HOM05D005065 ORTHO05D005944 1.5e-10 70.5 180 36.1
Carub.0002s1875 Capsella rubella HOM05D005065 ORTHO05D005944 1.5e-10 70.5 193 34.7
Sp5g27040 Schrenkiella parvula HOM05D005065 ORTHO05D005944 1.5e-10 70.5 165 34.5
Sc23g0001280 Simmondsia chinensis HOM05D005065 ORTHO05D005944 2.0e-10 70.1 130 39.2
THA.LOC104809741 Tarenaya hassleriana HOM05D005065 ORTHO05D005944 9.9e-10 67.8 166 38.0
A02p17610 Brassica napus HOM05D005065 ORTHO05D005944 2.2e-09 66.6 149 33.6
BraA02t06807Z Brassica rapa HOM05D005065 ORTHO05D005944 2.2e-09 66.6 149 33.6
BcaC03g15318 Brassica carinata HOM05D005065 ORTHO05D005944 3.8e-09 65.9 184 33.7
C02p29260 Brassica napus HOM05D005065 ORTHO05D005944 3.8e-09 65.9 184 33.7
BolC2t08977H Brassica oleracea HOM05D005065 ORTHO05D005944 3.8e-09 65.9 184 33.7
Thhalv10019856m.g Eutrema salsugineum HOM05D005065 ORTHO05D005944 3.8e-09 65.9 185 35.1
Aa31LG7G6580 Aethionema arabicum HOM05D005065 ORTHO05D005944 6.4e-09 65.1 79 59.5
Gorai.006G130800 Gossypium raimondii HOM05D005065 ORTHO05D005944 6.4e-09 65.1 167 35.3
Aqoxy5G02380 Aquilegia oxysepala HOM05D005065 ORTHO05D005944 1.1e-08 64.3 163 35.0
Aa31LG4G8650 Aethionema arabicum HOM05D005065 ORTHO05D005944 1.4e-08 63.9 179 36.3
FAN24G2022 Fragaria x ananassa HOM05D005065 ORTHO05D005944 1.4e-08 63.9 144 39.6
FvH4_2g11630 Fragaria vesca HOM05D005065 ORTHO05D005944 3.2e-08 62.8 113 44.2
FAN20G1873 Fragaria x ananassa HOM05D005065 ORTHO05D005944 4.2e-08 62.4 144 39.6
Gohir.A09G116200 Gossypium hirsutum HOM05D005065 ORTHO05D005944 4.2e-08 62.4 172 35.5
A07p38140 Brassica napus HOM05D005065 ORTHO05D005944 2.7e-07 59.7 154 35.7
CDE06G2798 Ceratophyllum demersum HOM05D005065 ORTHO05D005944 2.7e-07 59.7 117 38.5
PSO782G1863 Papaver somniferum HOM05D005065 ORTHO05D005944 2.7e-07 59.7 202 35.6
PGR102G0471 Punica granatum HOM05D005065 ORTHO05D005944 2.7e-07 59.7 181 34.3
MBI09_g14012_MAGBIO Magnolia biondii HOM05D005065 ORTHO05D005944 4.6e-07 58.9 174 34.5
HPP92_006851 Vanilla planifolia HOM05D064031 ORTHO05D005944 1.3e-06 57.4 150 32.0
Gohir.D09G113300 Gossypium hirsutum HOM05D005065 ORTHO05D005944 1.7e-06 57.0 167 33.5
Lsat_1_v5_gn_3_86260 Lactuca sativa HOM05D005317 ORTHO05D005146 1.7e-06 57.0 107 35.5
HPP92_006868 Vanilla planifolia HOM05D064031 ORTHO05D005944 1.7e-06 57.0 150 32.7
CANSAT25G3119 Cannabis sativa HOM05D005065 ORTHO05D005944 3.9e-06 55.8 182 30.2


User provided reference genes

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