Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu025479.1 Olea europaea HOM05D005819 ORTHO05D006780 2.8e-38 161.4 77 100.0
MSTRG.14168 Avicennia marina HOM05D005819 ORTHO05D006780 1.1e-31 139.4 73 89.0
Oeu037169.1 Olea europaea HOM05D005819 ORTHO05D006780 2.8e-30 134.8 74 89.2
SalBow1G3361 Salvia bowleyana HOM05D005819 ORTHO05D006780 2.8e-30 134.8 73 86.3
SalBow1G8148 Salvia bowleyana HOM05D005819 ORTHO05D006780 2.8e-30 134.8 73 86.3
RhsimUnG0197800 Rhododendron simsii HOM05D005819 ORTHO05D006780 3.7e-30 134.4 74 82.4
Nitab4.5_0004360g0020 Nicotiana tabacum HOM05D005819 ORTHO05D006780 6.2e-30 133.7 73 84.9
Oeu005644.2 Olea europaea HOM05D005819 ORTHO05D006780 8.1e-30 133.3 74 91.9
Solyc07g053150.3 Solanum lycopersicum HOM05D005819 ORTHO05D006780 1.1e-29 132.9 73 83.6
Sopen07g026700 Solanum pennellii HOM05D005819 ORTHO05D006780 1.1e-29 132.9 73 83.6
PGSC0003DMG400026152 Solanum tuberosum HOM05D005819 ORTHO05D006780 1.1e-29 132.9 73 83.6
Migut.F00120 Erythranthe guttata HOM05D005819 ORTHO05D006780 1.4e-29 132.5 73 86.3
Rhsim04G0058700 Rhododendron simsii HOM05D005819 ORTHO05D006780 1.4e-29 132.5 73 82.2
Sc12g0002590 Simmondsia chinensis HOM05D005819 ORTHO05D006780 1.4e-29 132.5 73 80.8
SalBow6G6406 Salvia bowleyana HOM05D005819 ORTHO05D006780 1.8e-29 132.1 73 84.9
SGA_v2.0_scaffold159G37608 Striga asiatica HOM05D005819 ORTHO05D006780 1.8e-29 132.1 73 83.6
QL08p035991 Quercus lobata HOM05D005819 ORTHO05D006780 2.4e-29 131.7 74 81.1
CAN.G640.15 Capsicum annuum HOM05D005819 ORTHO05D006780 3.1e-29 131.3 73 82.2
vmacro15799 Vaccinium macrocarpon HOM05D005819 ORTHO05D006780 3.1e-29 131.3 74 79.7
CiPaw.03G166600 Carya illinoinensis HOM05D005819 ORTHO05D006780 4.0e-29 131.0 73 82.2
Haze_13026 Corylus avellana HOM05D005819 ORTHO05D006780 4.0e-29 131.0 73 82.2
Peaxi162Scf00007g01734 Petunia axillaris HOM05D005819 ORTHO05D006780 4.0e-29 131.0 67 89.6
TAR626G0084 Trochodendron aralioides HOM05D005819 ORTHO05D006780 9.0e-29 129.8 73 78.1
Gohir.A03G161900 Gossypium hirsutum HOM05D005819 ORTHO05D006780 1.2e-28 129.4 73 82.2
Nitab4.5_0006653g0030 Nicotiana tabacum HOM05D005819 ORTHO05D006780 1.2e-28 129.4 73 82.2
FAN02G1820 Fragaria x ananassa HOM05D005819 ORTHO05D006780 1.5e-28 129.0 74 77.0
AUR62040308 Chenopodium quinoa HOM05D005819 ORTHO05D006780 2.0e-28 128.6 73 79.5
Hund06769 Selenicereus undatus HOM05D005819 ORTHO05D006780 2.0e-28 128.6 73 76.7
Aqoxy7G03432 Aquilegia oxysepala HOM05D005819 ORTHO05D006780 2.6e-28 128.3 73 75.3
AUR62007448 Chenopodium quinoa HOM05D005819 ORTHO05D006780 2.6e-28 128.3 73 78.1
Dinv13856 Davidia involucrata HOM05D005819 ORTHO05D006780 2.6e-28 128.3 74 78.4
Thhalv10028999m.g Eutrema salsugineum HOM05D005819 ORTHO05D006780 2.6e-28 128.3 73 79.5
Gohir.D02G185101 Gossypium hirsutum HOM05D005819 ORTHO05D006780 2.6e-28 128.3 73 79.5
Gorai.005G207400 Gossypium raimondii HOM05D005819 ORTHO05D006780 2.6e-28 128.3 73 79.5
RcHm_v2.0_Chr2g0161141 Rosa chinensis HOM05D005819 ORTHO05D006780 2.6e-28 128.3 73 78.1
EL10Ac2g02755 Beta vulgaris HOM05D005819 ORTHO05D006780 3.4e-28 127.9 73 80.8
EL10Ac5g12980 Beta vulgaris HOM05D005819 ORTHO05D006780 3.4e-28 127.9 73 79.5
Cc05_g05680 Coffea canephora HOM05D005819 ORTHO05D006780 3.4e-28 127.9 73 79.5
Sp6g03280 Schrenkiella parvula HOM05D005819 ORTHO05D006780 3.4e-28 127.9 73 78.1
CSS0044572 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 4.5e-28 127.5 73 76.7
FvH4_6g44280 Fragaria vesca HOM05D005819 ORTHO05D006780 4.5e-28 127.5 73 76.7
FAN14G4258 Fragaria x ananassa HOM05D005819 ORTHO05D006780 4.5e-28 127.5 73 76.7
Duzib248G0701 Durio zibethinus HOM05D005819 ORTHO05D006780 5.8e-28 127.1 73 80.8
ECA246G1767 Erigeron canadensis HOM05D005819 ORTHO05D006780 5.8e-28 127.1 73 76.7
FAN05G1257 Fragaria x ananassa HOM05D005819 ORTHO05D006780 5.8e-28 127.1 73 76.7
THA.LOC104806805 Tarenaya hassleriana HOM05D005819 ORTHO05D006780 5.8e-28 127.1 72 77.8
PSO210G2402 Papaver somniferum HOM05D005819 ORTHO05D006780 7.6e-28 126.7 73 79.5
FAN09G3032 Fragaria x ananassa HOM05D005819 ORTHO05D006780 1.0e-27 126.3 73 75.3
Thecc.02G167000 Theobroma cacao HOM05D005819 ORTHO05D006780 1.0e-27 126.3 73 79.5
AT4G03240 Arabidopsis thaliana HOM05D005819 ORTHO05D006780 1.3e-27 125.9 73 78.1
Dinv02570 Davidia involucrata HOM05D005819 ORTHO05D006780 1.3e-27 125.9 71 78.9
BcaC04g23988 Brassica carinata HOM05D005819 ORTHO05D006780 1.7e-27 125.6 73 76.7
PSO170G6190 Papaver somniferum HOM05D005819 ORTHO05D006780 1.7e-27 125.6 73 78.1
CARHR251690 Cardamine hirsuta HOM05D005819 ORTHO05D006780 2.2e-27 125.2 73 76.7
Ciclev10016814m.g Citrus clementina HOM05D005819 ORTHO05D006780 2.2e-27 125.2 73 76.7
Hma1.2p1_1090F.1_g255750 Hydrangea macrophylla HOM05D005819 ORTHO05D006780 2.2e-27 125.2 73 75.3
Lsat_1_v5_gn_3_41801 Lactuca sativa HOM05D005819 ORTHO05D006780 2.2e-27 125.2 73 74.0
Os01g0783600 Oryza sativa ssp. japonica HOM05D005819 ORTHO05D006780 2.2e-27 125.2 70 75.7
SGA_v2.0_scaffold49G18319 Striga asiatica HOM05D005819 ORTHO05D006780 2.2e-27 125.2 85 72.9
AL6G49690 Arabidopsis lyrata HOM05D005819 ORTHO05D006780 2.9e-27 124.8 73 76.7
A09p02550 Brassica napus HOM05D005819 ORTHO05D006780 2.9e-27 124.8 73 75.3
BraA09t35901Z Brassica rapa HOM05D005819 ORTHO05D006780 2.9e-27 124.8 73 75.3
Carub.0006s3382 Capsella rubella HOM05D005819 ORTHO05D006780 2.9e-27 124.8 73 76.7
Potri.013G150400 Populus trichocarpa HOM05D005819 ORTHO05D006780 2.9e-27 124.8 73 75.3
Atru.chr6.3097 Acer truncatum HOM05D005819 ORTHO05D006780 3.8e-27 124.4 73 75.3
BcaC01g06695 Brassica carinata HOM05D005819 ORTHO05D006780 3.8e-27 124.4 73 75.3
C03p36930 Brassica napus HOM05D005819 ORTHO05D006780 3.8e-27 124.4 73 75.3
BolC3t16000H Brassica oleracea HOM05D005819 ORTHO05D006780 3.8e-27 124.4 73 75.3
Prupe.3G227000 Prunus persica HOM05D005819 ORTHO05D006780 3.8e-27 124.4 73 74.0
CANSAT21G1768 Cannabis sativa HOM05D005819 ORTHO05D006780 4.9e-27 124.0 73 74.0
HanXRQChr17g0543121 Helianthus annuus HOM05D005819 ORTHO05D006780 6.5e-27 123.6 73 74.0
Ah.12g056190 Amaranthus hybridus HOM05D001579 ORTHO05D006780 8.4e-27 123.2 73 76.7
BcaB01g02514 Brassica carinata HOM05D005819 ORTHO05D006780 8.4e-27 123.2 73 74.0
A03p30520 Brassica napus HOM05D005819 ORTHO05D006780 8.4e-27 123.2 73 74.0
BraA03t12233Z Brassica rapa HOM05D005819 ORTHO05D006780 8.4e-27 123.2 73 74.0
CiPaw.04G121300 Carya illinoinensis HOM05D005819 ORTHO05D006780 1.4e-26 122.5 73 78.1
Eucgr.K00886 Eucalyptus grandis HOM05D005819 ORTHO05D006780 1.4e-26 122.5 73 74.0
Glyma.03G007300 Glycine max HOM05D005819 ORTHO05D006780 1.4e-26 122.5 73 72.6
Glyma.19G118800 Glycine max HOM05D005819 ORTHO05D006780 1.9e-26 122.1 73 72.6
Sabra13G0120900 Salix brachista HOM05D005819 ORTHO05D006780 1.9e-26 122.1 73 74.0
Psat3g085640 Pisum sativum HOM05D005819 ORTHO05D006780 2.5e-26 121.7 75 70.7
Lj1g0005576 Lotus japonicus HOM05D005819 ORTHO05D006780 4.2e-26 120.9 73 71.2
Nn2g10488 Nelumbo nucifera HOM05D005819 ORTHO05D006780 4.2e-26 120.9 73 71.2
PGR142G2655 Punica granatum HOM05D005819 ORTHO05D006780 4.2e-26 120.9 73 74.0
SHI10263 Sapria himalayana HOM05D005819 ORTHO05D006780 4.2e-26 120.9 73 72.6
ClCG02G011330 Citrullus lanatus HOM05D005819 ORTHO05D006780 5.5e-26 120.6 73 75.3
Lalb_Chr22g0358491 Lupinus albus HOM05D005819 ORTHO05D006780 5.5e-26 120.6 73 71.2
Sed0001645 Sechium edule HOM05D005819 ORTHO05D006780 5.5e-26 120.6 73 74.0
Zm00001eb034710 Zea mays HOM05D005819 ORTHO05D006780 7.1e-26 120.2 73 68.5
arahy.Tifrunner.gnm1.ann1.7T7QMX Arachis hypogaea HOM05D005819 ORTHO05D006780 9.3e-26 119.8 73 71.2
GSVIVG01000441001 Vitis vinifera HOM05D005819 ORTHO05D006780 9.3e-26 119.8 73 72.6
Manes.18G113901 Manihot esculenta HOM05D005819 ORTHO05D006780 1.2e-25 119.4 73 72.6
TPR.G7847 Trifolium pratense HOM05D005819 ORTHO05D006780 1.2e-25 119.4 73 69.9
MD17G1087700 Malus domestica HOM05D005819 ORTHO05D006780 1.6e-25 119.0 73 72.6
Zm00001eb151360 Zea mays HOM05D005819 ORTHO05D006780 1.6e-25 119.0 70 70.0
MELO3C013522.2 Cucumis melo HOM05D005819 ORTHO05D006780 2.1e-25 118.6 73 74.0
DCAR_009705 Daucus carota HOM05D005819 ORTHO05D006780 2.1e-25 118.6 67 76.1
CSS0036944 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 2.7e-25 118.2 67 77.6
VMungo1383G0784 Vigna mungo HOM05D005819 ORTHO05D006780 2.7e-25 118.2 73 69.9
Phvul.001G107000 Phaseolus vulgaris HOM05D005819 ORTHO05D006780 4.6e-25 117.5 73 69.9
SEGI_37806 Sequoiadendron giganteum HOM05D005819 ORTHO05D006780 4.6e-25 117.5 73 71.2
VMungo0647G1299 Vigna mungo HOM05D005819 ORTHO05D006780 4.6e-25 117.5 73 68.5
CDE02G1488 Ceratophyllum demersum HOM05D005819 ORTHO05D006780 7.9e-25 116.7 73 71.2
CsaV3_6G012280 Cucumis sativus L. HOM05D005819 ORTHO05D006780 7.9e-25 116.7 73 72.6
TWI18G0421 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 7.9e-25 116.7 73 72.6
TWI36G1190 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 1.3e-24 115.9 73 69.9
Ca_03448_v3 Cicer arietinum L. HOM05D005819 ORTHO05D006780 2.3e-24 115.2 73 65.8
BcaB01g01964 Brassica carinata HOM05D005819 ORTHO05D006780 3.9e-24 114.4 68 76.5
Aa31LG5G2740 Aethionema arabicum HOM05D005819 ORTHO05D006780 8.7e-24 113.2 95 56.8
Medtr6g071520 Medicago truncatula HOM05D005819 ORTHO05D006780 2.5e-23 111.7 73 64.4
Medtr7g087030 Medicago truncatula HOM05D005819 ORTHO05D006780 2.5e-23 111.7 73 64.4
unitig_749.g13948 Utricularia gibba HOM05D005819 ORTHO05D006780 2.5e-23 111.7 78 69.2
CDE09G0293 Ceratophyllum demersum HOM05D007034 ORTHO05D006780 3.3e-23 111.3 67 71.6
arahy.Tifrunner.gnm1.ann1.Q06U4P Arachis hypogaea HOM05D005819 ORTHO05D006780 5.7e-23 110.5 87 59.8
SMO140G0069 Selaginella moellendorffii HOM05D005819 ORTHO05D006780 7.6e-20 100.1 67 62.7
HanXRQChr04g0112441 Helianthus annuus HOM05D005819 ORTHO05D006780 5.0e-19 97.4 62 69.4
Mapoly0009s0241 Marchantia polymorpha HOM05D005819 ORTHO05D006780 5.0e-19 97.4 72 59.7
Pp3c9_21390 Physcomitrium patens HOM05D005819 ORTHO05D006780 5.0e-19 97.4 70 55.7
DCAR_021205 Daucus carota HOM05D005819 ORTHO05D006780 8.5e-19 96.7 47 87.2
Cre12.g538350 Chlamydomonas reinhardtii HOM05D005819 ORTHO05D006780 1.8e-16 89.0 69 56.5
AagrBONN_evm.TU.Sc2ySwM_117.2177 Anthoceros agrestis HOM05D005819 ORTHO05D006780 1.9e-15 85.5 73 53.4
Medtr6g071700 Medicago truncatula HOM05D005819 ORTHO05D006780 1.9e-15 85.5 47 70.2
CBR_g3856 Chara braunii HOM05D005819 ORTHO05D006780 1.3e-14 82.8 64 51.6
HPP92_008010 Vanilla planifolia HOM05D005819 ORTHO05D006780 3.1e-13 78.2 74 51.4
MD09G1099400 Malus domestica HOM05D005819 ORTHO05D006780 1.2e-12 76.3 70 54.3
Sed0008711 Sechium edule HOM05D005819 ORTHO05D006780 2.6e-12 75.1 48 64.6
COL.COLO4_13056 Corchorus olitorius HOM05D005819 ORTHO05D006780 2.5e-10 68.6 42 73.8
PRCOL_00006727 Prasinoderma coloniale HOM05D005819 ORTHO05D006780 2.5e-10 68.6 53 50.9
MCO13G341 Micromonas commoda HOM05D005819 ORTHO05D006780 3.6e-09 64.7 65 44.6
Actinidia30496 Actinidia chinensis HOM05D005819 ORTHO05D006780 3.9e-08 61.2 36 75.0
Haze_01489 Corylus avellana HOM05D005819 ORTHO05D006780 8.8e-08 60.1 31 87.1
ATR1132G123 Amborella trichopoda HOM05D005819 ORTHO05D006780 1.1e-07 59.7 42 59.5
Cfa024975 Carpinus fangiana HOM05D005819 ORTHO05D006780 2.8e-06 55.1 67 38.8


User provided reference genes

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