Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu025400.1 Olea europaea HOM05D003761 ORTHO05D004412 2.2e-99 365.5 177 100.0
Oeu025960.1 Olea europaea HOM05D003761 ORTHO05D004412 2.6e-63 245.7 165 72.1
MSTRG.14590 Avicennia marina HOM05D003761 ORTHO05D004412 1.7e-46 189.9 169 55.6
Migut.H01629 Erythranthe guttata HOM05D003761 ORTHO05D004412 9.9e-39 164.1 160 51.2
MSTRG.13107 Avicennia marina HOM05D003761 ORTHO05D004412 4.9e-38 161.8 160 53.1
Oeu002779.1 Olea europaea HOM05D003761 ORTHO05D004412 9.3e-37 157.5 156 51.3
Oeu057021.1 Olea europaea HOM05D003761 ORTHO05D004412 6.6e-35 151.4 145 51.7
Lj2C256G8 Lonicera japonica HOM05D003761 ORTHO05D004412 3.1e-32 142.5 152 48.7
Actinidia39257 Actinidia chinensis HOM05D003761 ORTHO05D004412 5.3e-32 141.7 158 46.2
MSTRG.7132 Avicennia marina HOM05D003761 ORTHO05D004412 9.0e-32 141.0 154 48.1
SGA_v2.0_scaffold7G03701 Striga asiatica HOM05D003761 ORTHO05D004412 9.0e-32 141.0 152 51.3
Rhsim13G0141000 Rhododendron simsii HOM05D003761 ORTHO05D004412 2.6e-31 139.4 163 46.0
Hma1.2p1_1175F.1_g263990 Hydrangea macrophylla HOM05D003761 ORTHO05D004412 5.8e-31 138.3 147 49.0
Migut.M01442 Erythranthe guttata HOM05D003761 ORTHO05D004412 3.8e-30 135.6 159 47.8
Dinv15342 Davidia involucrata HOM05D003761 ORTHO05D004412 4.9e-30 135.2 138 50.0
ECA248G3040 Erigeron canadensis HOM05D003761 ORTHO05D004412 8.4e-30 134.4 143 48.3
SGA_v2.0_scaffold186G40120 Striga asiatica HOM05D003761 ORTHO05D004412 1.1e-29 134.0 151 47.0
CSS0009294 Camellia sinensis var. sinensis HOM05D003761 ORTHO05D004412 1.4e-29 133.7 152 46.7
CSS0045719 Camellia sinensis var. sinensis HOM05D003761 ORTHO05D004412 1.4e-29 133.7 152 46.7
CAN.G1186.30 Capsicum annuum HOM05D003761 ORTHO05D004412 2.4e-29 132.9 145 47.6
Lsat_1_v5_gn_1_130120 Lactuca sativa HOM05D003761 ORTHO05D004412 3.2e-29 132.5 151 43.7
SGA_v2.0_scaffold49G18223 Striga asiatica HOM05D003761 ORTHO05D004412 4.2e-29 132.1 147 49.7
CiPaw.09G108600 Carya illinoinensis HOM05D003761 ORTHO05D004412 5.4e-29 131.7 153 45.1
TAR626G0912 Trochodendron aralioides HOM05D003761 ORTHO05D004412 5.4e-29 131.7 167 43.1
Potri.006G005600 Populus trichocarpa HOM05D003761 ORTHO05D004412 1.2e-28 130.6 153 44.4
Sopen11g006960 Solanum pennellii HOM05D003761 ORTHO05D004412 1.2e-28 130.6 148 48.0
PGSC0003DMG400013274 Solanum tuberosum HOM05D003761 ORTHO05D004412 1.2e-28 130.6 140 50.0
SalBow8G1906 Salvia bowleyana HOM05D003761 ORTHO05D004412 1.6e-28 130.2 137 49.6
Gorai.010G248800 Gossypium raimondii HOM05D003761 ORTHO05D004412 6.0e-28 128.3 153 47.7
Actinidia11903 Actinidia chinensis HOM05D003761 ORTHO05D004412 7.9e-28 127.9 165 44.2
Lsat_1_v5_gn_7_13080 Lactuca sativa HOM05D003761 ORTHO05D004412 7.9e-28 127.9 171 40.9
Peaxi162Scf00558g00515 Petunia axillaris HOM05D003761 ORTHO05D004412 7.9e-28 127.9 141 51.1
Gohir.A06G204100 Gossypium hirsutum HOM05D003761 ORTHO05D004412 1.0e-27 127.5 148 45.9
Cpa.g.sc27.232 Carica papaya HOM05D003761 ORTHO05D004412 1.3e-27 127.1 143 44.1
Sabra06G0004500 Salix brachista HOM05D003761 ORTHO05D004412 1.3e-27 127.1 157 43.3
HanXRQChr01g0003591 Helianthus annuus HOM05D003761 ORTHO05D004412 1.8e-27 126.7 144 43.1
EL10Ac8g20260 Beta vulgaris HOM05D003761 ORTHO05D004412 3.9e-27 125.6 155 42.6
PGR042G2523 Punica granatum HOM05D003761 ORTHO05D004412 3.9e-27 125.6 152 45.4
Gohir.D06G217400 Gossypium hirsutum HOM05D003761 ORTHO05D004412 5.1e-27 125.2 153 46.4
vmacro03612 Vaccinium macrocarpon HOM05D003761 ORTHO05D004412 5.1e-27 125.2 148 45.9
arahy.Tifrunner.gnm1.ann1.UZ71G8 Arachis hypogaea HOM05D003761 ORTHO05D004412 6.7e-27 124.8 144 45.8
arahy.Tifrunner.gnm1.ann1.YY2BB8 Arachis hypogaea HOM05D003761 ORTHO05D004412 6.7e-27 124.8 145 46.9
Cc09_g00350 Coffea canephora HOM05D003761 ORTHO05D004412 6.7e-27 124.8 142 49.3
Solyc11g012170.1 Solanum lycopersicum HOM05D003761 ORTHO05D004412 6.7e-27 124.8 140 48.6
Thecc.06G240300 Theobroma cacao HOM05D003761 ORTHO05D004412 8.7e-27 124.4 142 47.2
Eucgr.L00155 Eucalyptus grandis HOM05D003761 ORTHO05D004412 7.4e-26 121.3 158 39.9
Potri.016G006200 Populus trichocarpa HOM05D003761 ORTHO05D004412 9.6e-26 120.9 152 44.1
Nitab4.5_0000143g0280 Nicotiana tabacum HOM05D003761 ORTHO05D004412 1.6e-25 120.2 144 45.8
Duzib192G0597 Durio zibethinus HOM05D003761 ORTHO05D004412 2.1e-25 119.8 144 45.1
MBI18_g42884_MAGBIO Magnolia biondii HOM05D003761 ORTHO05D004412 2.1e-25 119.8 144 41.7
vmacro03611 Vaccinium macrocarpon HOM05D003761 ORTHO05D004412 3.7e-25 119.0 153 42.5
vmacro23224 Vaccinium macrocarpon HOM05D003761 ORTHO05D004412 3.7e-25 119.0 153 42.5
AUR62012843 Chenopodium quinoa HOM05D003761 ORTHO05D004412 4.8e-25 118.6 160 40.6
AUR62021816 Chenopodium quinoa HOM05D003761 ORTHO05D004412 6.2e-25 118.2 144 44.4
Aqoxy4G01086 Aquilegia oxysepala HOM05D003761 ORTHO05D004412 1.1e-24 117.5 149 43.0
CANSAT56G1869 Cannabis sativa HOM05D003761 ORTHO05D004412 1.4e-24 117.1 125 49.6
Sabra16G0011000 Salix brachista HOM05D003761 ORTHO05D004412 1.8e-24 116.7 143 43.4
Cfa000041 Carpinus fangiana HOM05D003761 ORTHO05D004412 2.4e-24 116.3 154 42.2
Haze_07014 Corylus avellana HOM05D003761 ORTHO05D004412 3.1e-24 115.9 154 42.2
MBI18_g27019_MAGBIO Magnolia biondii HOM05D003761 ORTHO05D004412 3.1e-24 115.9 134 42.5
Atru.chr1.2273 Acer truncatum HOM05D003761 ORTHO05D004412 4.0e-24 115.5 142 41.5
GSVIVG01005138001 Vitis vinifera HOM05D003761 ORTHO05D004412 4.0e-24 115.5 131 46.6
Psat4g002880 Pisum sativum HOM05D003761 ORTHO05D004412 5.3e-24 115.2 145 44.1
Sed0021615 Sechium edule HOM05D003761 ORTHO05D004412 6.9e-24 114.8 154 36.4
Ciclev10016770m.g Citrus clementina HOM05D003761 ORTHO05D004412 1.2e-23 114.0 143 43.4
Eucgr.L00154 Eucalyptus grandis HOM05D003761 ORTHO05D004412 1.2e-23 114.0 149 40.9
Glyma.17G005900 Glycine max HOM05D003761 ORTHO05D004412 1.2e-23 114.0 155 41.9
Lalb_Chr15g0088211 Lupinus albus HOM05D003761 ORTHO05D004412 1.2e-23 114.0 151 41.1
Nn1g07502 Nelumbo nucifera HOM05D003761 ORTHO05D004412 1.2e-23 114.0 160 39.4
Lj4g0001357 Lotus japonicus HOM05D003761 ORTHO05D004412 1.5e-23 113.6 143 40.6
Sed0014180 Sechium edule HOM05D003761 ORTHO05D004412 1.5e-23 113.6 142 40.1
COL.COLO4_31936 Corchorus olitorius HOM05D003761 ORTHO05D004412 2.0e-23 113.2 130 44.6
DCAR_030834 Daucus carota HOM05D003761 ORTHO05D004412 2.0e-23 113.2 174 39.7
QL05p067831 Quercus lobata HOM05D003761 ORTHO05D004412 3.4e-23 112.5 154 39.6
Aa31LG9G5380 Aethionema arabicum HOM05D003761 ORTHO05D004412 4.5e-23 112.1 141 44.0
CsaV3_1G015780 Cucumis sativus L. HOM05D003761 ORTHO05D004412 5.8e-23 111.7 154 37.0
CsaV3_UNG065500 Cucumis sativus L. HOM05D003761 ORTHO05D004412 5.8e-23 111.7 154 37.0
ClCG01G010750 Citrullus lanatus HOM05D003761 ORTHO05D004412 7.6e-23 111.3 153 37.9
Manes.09G083000 Manihot esculenta HOM05D003761 ORTHO05D004412 7.6e-23 111.3 145 42.1
Sc24g0000400 Simmondsia chinensis HOM05D003761 ORTHO05D004412 7.6e-23 111.3 144 43.1
CAN.G1156.14 Capsicum annuum HOM05D003761 ORTHO05D004412 1.7e-22 110.2 148 42.6
HPP92_024936 Vanilla planifolia HOM05D003761 ORTHO05D004412 1.7e-22 110.2 129 43.4
HPP92_024932 Vanilla planifolia HOM05D003761 ORTHO05D004412 2.2e-22 109.8 129 44.2
CDE10G1059 Ceratophyllum demersum HOM05D003761 ORTHO05D004412 2.9e-22 109.4 150 38.0
Lalb_Chr13g0304361 Lupinus albus HOM05D003761 ORTHO05D004412 4.9e-22 108.6 147 41.5
MD05G1360900 Malus domestica HOM05D003761 ORTHO05D004412 4.9e-22 108.6 170 37.1
MELO3C025526.2 Cucumis melo HOM05D003761 ORTHO05D004412 1.1e-21 107.5 157 35.0
Medtr4g133932 Medicago truncatula HOM05D003761 ORTHO05D004412 1.1e-21 107.5 155 39.4
Ca_20995_v3 Cicer arietinum L. HOM05D003761 ORTHO05D004412 1.4e-21 107.1 143 39.9
Sp2g12340 Schrenkiella parvula HOM05D003761 ORTHO05D004412 1.4e-21 107.1 140 42.9
Actinidia02285 Actinidia chinensis HOM05D000829 ORTHO05D000690 1.9e-21 106.7 139 44.6
BcaC06g31357 Brassica carinata HOM05D003761 ORTHO05D004412 2.5e-21 106.3 140 41.4
FAN25G2178 Fragaria x ananassa HOM05D003761 ORTHO05D004412 2.5e-21 106.3 163 39.9
MBI19_g14888_MAGBIO Magnolia biondii HOM05D003761 ORTHO05D004412 2.5e-21 106.3 126 43.7
Prupe.4G004300 Prunus persica HOM05D003761 ORTHO05D004412 2.5e-21 106.3 151 40.4
HanXRQChr15g0470241 Helianthus annuus HOM05D003761 ORTHO05D004412 3.2e-21 105.9 145 40.0
AL8G10320 Arabidopsis lyrata HOM05D003761 ORTHO05D004412 4.2e-21 105.5 141 40.4
FvH4_3g00370 Fragaria vesca HOM05D003761 ORTHO05D004412 4.2e-21 105.5 161 40.4
TPR.G5987 Trifolium pratense HOM05D003761 ORTHO05D004412 4.2e-21 105.5 139 41.0
A06p44900 Brassica napus HOM05D003761 ORTHO05D004412 9.3e-21 104.4 140 40.7
BraA06t27361Z Brassica rapa HOM05D003761 ORTHO05D004412 9.3e-21 104.4 140 40.7
CARHR173680 Cardamine hirsuta HOM05D003761 ORTHO05D004412 9.3e-21 104.4 133 42.1
MD10G1338600 Malus domestica HOM05D003761 ORTHO05D004412 9.3e-21 104.4 165 39.4
Nitab4.5_0001198g0070 Nicotiana tabacum HOM05D003761 ORTHO05D004412 9.3e-21 104.4 137 45.3
unitig_52.g17560 Utricularia gibba HOM05D003761 ORTHO05D004412 9.3e-21 104.4 166 37.3
BolC4t28284H Brassica oleracea HOM05D003761 ORTHO05D004412 1.2e-20 104.0 146 39.7
BcaB06g29129 Brassica carinata HOM05D003761 ORTHO05D004412 1.6e-20 103.6 152 40.1
Carub.0004s2229 Capsella rubella HOM05D003761 ORTHO05D004412 1.6e-20 103.6 142 40.1
THA.LOC104806736 Tarenaya hassleriana HOM05D003761 ORTHO05D004412 1.6e-20 103.6 133 42.9
VMungo1215G0779 Vigna mungo HOM05D003761 ORTHO05D004412 1.6e-20 103.6 138 39.1
Eucgr.E03855 Eucalyptus grandis HOM05D003761 ORTHO05D004412 2.1e-20 103.2 133 40.6
Thhalv10001056m.g Eutrema salsugineum HOM05D003761 ORTHO05D004412 2.1e-20 103.2 140 39.3
Aa31LG2G12410 Aethionema arabicum HOM05D003761 ORTHO05D004412 2.7e-20 102.8 130 41.5
BcaB07g30768 Brassica carinata HOM05D003761 ORTHO05D004412 2.7e-20 102.8 138 41.3
Thhalv10017342m.g Eutrema salsugineum HOM05D003761 ORTHO05D004412 2.7e-20 102.8 149 40.3
BcaB02g09050 Brassica carinata HOM05D003761 ORTHO05D004412 3.5e-20 102.4 145 39.3
BolC4t22355H Brassica oleracea HOM05D003761 ORTHO05D004412 3.5e-20 102.4 145 39.3
Lj6g0023004 Lotus japonicus HOM05D003761 ORTHO05D004412 3.5e-20 102.4 161 39.8
TWI38G2030 Tripterygium wilfordii HOM05D003761 ORTHO05D004412 3.5e-20 102.4 151 39.7
A05p06360 Brassica napus HOM05D003761 ORTHO05D004412 4.6e-20 102.1 145 39.3
A09p23140 Brassica napus HOM05D003761 ORTHO05D004412 4.6e-20 102.1 135 43.0
BraA05t19604Z Brassica rapa HOM05D003761 ORTHO05D004412 4.6e-20 102.1 145 39.3
BraA09t37917Z Brassica rapa HOM05D003761 ORTHO05D004412 4.6e-20 102.1 135 43.0
Carub.0008s0015 Capsella rubella HOM05D003761 ORTHO05D004412 4.6e-20 102.1 140 39.3
FAN21G2431 Fragaria x ananassa HOM05D003761 ORTHO05D004412 6.0e-20 101.7 163 38.0
Sp4g22430 Schrenkiella parvula HOM05D003761 ORTHO05D004412 6.0e-20 101.7 146 38.4
BolC7t43669H Brassica oleracea HOM05D003761 ORTHO05D004412 7.9e-20 101.3 140 40.0
Phvul.003G086700 Phaseolus vulgaris HOM05D003761 ORTHO05D004412 7.9e-20 101.3 150 39.3
PGSC0003DMG400013298 Solanum tuberosum HOM05D003761 ORTHO05D004412 7.9e-20 101.3 158 41.1
BcaC02g07354 Brassica carinata HOM05D003761 ORTHO05D004412 1.0e-19 100.9 146 39.0
THA.LOC104798379 Tarenaya hassleriana HOM05D003761 ORTHO05D004412 1.0e-19 100.9 130 45.4
C07p31280 Brassica napus HOM05D003761 ORTHO05D004412 1.3e-19 100.5 143 39.9
BcaC04g21612 Brassica carinata HOM05D003761 ORTHO05D004412 1.8e-19 100.1 140 38.6
C09p29870 Brassica napus HOM05D003761 ORTHO05D004412 1.8e-19 100.1 140 38.6
A04p30050 Brassica napus HOM05D003761 ORTHO05D004412 2.3e-19 99.8 146 38.4
BraA04t18501Z Brassica rapa HOM05D003761 ORTHO05D004412 2.3e-19 99.8 146 38.4
Solyc11g012705.2 Solanum lycopersicum HOM05D003761 ORTHO05D004412 2.3e-19 99.8 157 40.8
Sopen11g007440 Solanum pennellii HOM05D003761 ORTHO05D004412 2.3e-19 99.8 157 40.8
Ah.09g233900 Amaranthus hybridus HOM05D003761 ORTHO05D004412 3.0e-19 99.4 153 39.9
BcaB02g09051 Brassica carinata HOM05D003761 ORTHO05D004412 3.9e-19 99.0 146 38.4
Hma1.2p1_1175F.1_g263980 Hydrangea macrophylla HOM05D003761 ORTHO05D004412 1.1e-18 97.4 94 52.1
AT2G40113 Arabidopsis thaliana HOM05D003761 ORTHO05D004412 1.5e-18 97.1 148 37.8
PSO541G3650 Papaver somniferum HOM05D003761 ORTHO05D004412 1.5e-18 97.1 147 38.8
AL4G37770 Arabidopsis lyrata HOM05D003761 ORTHO05D004412 2.5e-18 96.3 136 38.2
AT5G47635 Arabidopsis thaliana HOM05D003761 ORTHO05D004412 2.5e-18 96.3 140 37.9
CARHR223820 Cardamine hirsuta HOM05D003761 ORTHO05D004412 2.5e-18 96.3 137 37.2
Aa31LG5G19480 Aethionema arabicum HOM05D003761 ORTHO05D004412 3.3e-18 95.9 141 39.7
BcaC09g50449 Brassica carinata HOM05D003761 ORTHO05D004412 3.3e-18 95.9 131 38.2
C01p25300 Brassica napus HOM05D003761 ORTHO05D004412 3.3e-18 95.9 131 38.2
BolC1t02480H Brassica oleracea HOM05D003761 ORTHO05D004412 3.3e-18 95.9 131 38.2
Carub.0007s2420 Capsella rubella HOM05D003761 ORTHO05D004412 4.3e-18 95.5 130 37.7
CARHR135090 Cardamine hirsuta HOM05D003761 ORTHO05D004412 5.7e-18 95.1 147 36.7
PSO675G1588 Papaver somniferum HOM05D003761 ORTHO05D004412 7.4e-18 94.7 147 36.7
PGR004G2813 Punica granatum HOM05D003761 ORTHO05D004412 9.6e-18 94.4 165 38.2
TWI38G1412 Tripterygium wilfordii HOM05D003761 ORTHO05D004412 1.3e-17 94.0 157 36.3
Thhalv10026465m.g Eutrema salsugineum HOM05D003761 ORTHO05D004412 3.7e-17 92.4 130 37.7
AT4G17215 Arabidopsis thaliana HOM05D003761 ORTHO05D004412 6.2e-17 91.7 130 36.2
Peaxi162Scf00442g00073 Petunia axillaris HOM05D003761 ORTHO05D004412 8.2e-17 91.3 136 44.1
AL7G37500 Arabidopsis lyrata HOM05D003761 ORTHO05D004412 5.3e-16 88.6 130 35.4
BcaC06g34236 Brassica carinata HOM05D003761 ORTHO05D004412 9.0e-16 87.8 136 38.2
Os10g0208600 Oryza sativa ssp. japonica HOM05D003761 ORTHO05D004412 3.4e-15 85.9 145 39.3
BraA01t01941Z Brassica rapa HOM05D003761 ORTHO05D004412 5.8e-15 85.1 140 35.0
Cpa.g.sc27.234 Carica papaya HOM05D003761 ORTHO05D004412 5.8e-15 85.1 84 46.4
BcaNung03472 Brassica carinata HOM05D003761 ORTHO05D004412 1.0e-14 84.3 131 35.9
Sp7g16980 Schrenkiella parvula HOM05D003761 ORTHO05D004412 2.9e-14 82.8 130 34.6
ATR0827G170 Amborella trichopoda HOM05D003761 ORTHO05D004412 5.0e-14 82.0 110 40.0
Os10g0206500 Oryza sativa ssp. japonica HOM05D003761 ORTHO05D004412 5.0e-14 82.0 153 34.0
A03p50350 Brassica napus HOM05D003761 ORTHO05D004412 1.9e-13 80.1 130 34.6
BraA03t14124Z Brassica rapa HOM05D003761 ORTHO05D004412 1.9e-13 80.1 130 34.6
Zm00001eb050510 Zea mays HOM05D003761 ORTHO05D004412 2.5e-13 79.7 145 35.2
BcaC06g33549 Brassica carinata HOM05D003761 ORTHO05D004412 5.5e-13 78.6 130 34.6
C07p48660 Brassica napus HOM05D003761 ORTHO05D004412 5.5e-13 78.6 130 34.6
BolC7t45373H Brassica oleracea HOM05D003761 ORTHO05D004412 5.5e-13 78.6 130 34.6
BcaNung00112 Brassica carinata HOM05D003761 ORTHO05D004412 9.3e-13 77.8 121 35.5
BcaNung03474 Brassica carinata HOM05D003761 ORTHO05D004412 2.1e-12 76.6 130 34.6
BolC9t55850H Brassica oleracea HOM05D003761 ORTHO05D004412 4.6e-12 75.5 104 37.5
Sc05g0009870 Simmondsia chinensis HOM05D003761 ORTHO05D004412 4.6e-12 75.5 101 41.6
C04p67800 Brassica napus HOM05D003761 ORTHO05D004412 7.4e-10 68.2 86 40.7
SEGI_00399 Sequoiadendron giganteum HOM05D003328 ORTHO05D003722 3.7e-09 65.9 118 35.6


User provided reference genes

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