Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu025377.1 Olea europaea HOM05D003291 ORTHO05D003923 1.6e-188 662.5 314 100.0
Oeu009557.1 Olea europaea HOM05D003291 ORTHO05D003923 1.1e-165 586.6 303 92.1
Migut.C00602 Erythranthe guttata HOM05D003291 ORTHO05D003923 4.2e-165 584.7 303 90.4
SalBow4G1770 Salvia bowleyana HOM05D003291 ORTHO05D003923 6.0e-164 580.9 303 90.1
SalBow6G1638 Salvia bowleyana HOM05D003291 ORTHO05D003923 5.6e-162 574.3 303 89.1
SalBow6G6854 Salvia bowleyana HOM05D003291 ORTHO05D003923 5.6e-162 574.3 303 89.1
SGA_v2.0_scaffold208G42005 Striga asiatica HOM05D003291 ORTHO05D003923 4.8e-161 571.2 303 87.8
Dinv35983 Davidia involucrata HOM05D003291 ORTHO05D003923 6.9e-160 567.4 303 87.1
MSTRG.1333 Avicennia marina HOM05D003291 ORTHO05D003923 1.2e-159 566.6 303 87.5
TAR625G0168 Trochodendron aralioides HOM05D003291 ORTHO05D003923 1.7e-158 562.8 303 85.5
Cc10_g04020 Coffea canephora HOM05D003291 ORTHO05D003923 6.5e-158 560.8 303 85.8
Oeu006153.2 Olea europaea HOM05D003291 ORTHO05D003923 5.5e-157 557.8 303 86.5
CSS0046933 Camellia sinensis var. sinensis HOM05D003291 ORTHO05D003923 2.3e-155 552.4 303 85.5
CSS0029839 Camellia sinensis var. sinensis HOM05D003291 ORTHO05D003923 5.1e-155 551.2 303 84.8
TAR381G0638 Trochodendron aralioides HOM05D003291 ORTHO05D003923 5.1e-155 551.2 303 84.2
Hma1.2p1_0337F.1_g129290 Hydrangea macrophylla HOM05D003291 ORTHO05D003923 2.5e-154 548.9 303 83.8
Lj4A52T42 Lonicera japonica HOM05D003291 ORTHO05D003923 9.6e-154 547.0 303 84.8
Aqoxy6G01378 Aquilegia oxysepala HOM05D003291 ORTHO05D003923 8.2e-153 543.9 303 83.5
Actinidia38048 Actinidia chinensis HOM05D003291 ORTHO05D003923 1.4e-152 543.1 303 83.5
Ciclev10000140m.g Citrus clementina HOM05D003291 ORTHO05D003923 1.8e-152 542.7 303 82.2
Nn5g30207 Nelumbo nucifera HOM05D003291 ORTHO05D003923 2.4e-152 542.3 303 83.8
unitig_26.g9818 Utricularia gibba HOM05D003291 ORTHO05D003923 5.3e-152 541.2 303 81.8
ECA232G2639 Erigeron canadensis HOM05D003291 ORTHO05D003923 9.0e-152 540.4 303 82.8
HanXRQChr16g0507451 Helianthus annuus HOM05D003291 ORTHO05D003923 9.0e-152 540.4 303 82.5
DCAR_023940 Daucus carota HOM05D003291 ORTHO05D003923 1.2e-151 540.0 305 83.0
Peaxi162Scf00528g00823 Petunia axillaris HOM05D003291 ORTHO05D003923 2.0e-151 539.3 304 82.2
Nitab4.5_0011844g0020 Nicotiana tabacum HOM05D003291 ORTHO05D003923 4.5e-151 538.1 303 83.5
CANSAT25G2224 Cannabis sativa HOM05D003291 ORTHO05D003923 5.8e-151 537.7 305 83.3
GSVIVG01009556001 Vitis vinifera HOM05D003291 ORTHO05D003923 1.3e-150 536.6 316 81.3
Peaxi162Scf00064g00220 Petunia axillaris HOM05D003291 ORTHO05D003923 1.7e-150 536.2 303 82.5
Nitab4.5_0005301g0010 Nicotiana tabacum HOM05D003291 ORTHO05D003923 2.2e-150 535.8 303 82.2
Atru.chr13.635 Acer truncatum HOM05D003291 ORTHO05D003923 2.9e-150 535.4 303 80.5
Lsat_1_v5_gn_6_113580 Lactuca sativa HOM05D003291 ORTHO05D003923 1.4e-149 533.1 304 81.9
Nitab4.5_0000453g0160 Nicotiana tabacum HOM05D003291 ORTHO05D003923 1.4e-149 533.1 303 82.5
Prupe.1G440500 Prunus persica HOM05D003291 ORTHO05D003923 2.5e-149 532.3 303 81.5
RcHm_v2.0_Chr6g0307181 Rosa chinensis HOM05D003291 ORTHO05D003923 3.2e-149 531.9 303 81.5
PSO170G2235 Papaver somniferum HOM05D003291 ORTHO05D003923 4.2e-149 531.6 303 81.2
ECA246G0633 Erigeron canadensis HOM05D003291 ORTHO05D003923 5.5e-149 531.2 304 80.9
FvH4_2g34860 Fragaria vesca HOM05D003291 ORTHO05D003923 5.5e-149 531.2 303 81.5
FAN27G0136 Fragaria x ananassa HOM05D003291 ORTHO05D003923 1.2e-148 530.0 303 81.2
FAN20G0796 Fragaria x ananassa HOM05D003291 ORTHO05D003923 2.1e-148 529.3 303 81.2
PGR031G1546 Punica granatum HOM05D003291 ORTHO05D003923 2.1e-148 529.3 303 81.5
COL.COLO4_26461 Corchorus olitorius HOM05D003291 ORTHO05D003923 2.7e-148 528.9 303 79.9
Aqoxy5G01279 Aquilegia oxysepala HOM05D003291 ORTHO05D003923 3.5e-148 528.5 303 80.5
Manes.05G171000 Manihot esculenta HOM05D003291 ORTHO05D003923 3.5e-148 528.5 303 81.8
PSO210G0952 Papaver somniferum HOM05D003291 ORTHO05D003923 3.5e-148 528.5 303 80.5
Duzib116G0711 Durio zibethinus HOM05D003291 ORTHO05D003923 4.6e-148 528.1 303 80.5
PGSC0003DMG400008030 Solanum tuberosum HOM05D003291 ORTHO05D003923 4.6e-148 528.1 303 80.5
FAN15G0927 Fragaria x ananassa HOM05D003291 ORTHO05D003923 7.9e-148 527.3 303 81.2
Solyc04g079300.3 Solanum lycopersicum HOM05D003291 ORTHO05D003923 1.0e-147 526.9 303 80.5
CAN.G1422.3 Capsicum annuum HOM05D003291 ORTHO05D003923 1.3e-147 526.6 305 79.7
Dinv08769 Davidia involucrata HOM05D003291 ORTHO05D003923 1.3e-147 526.6 303 82.2
Thecc.08G012800 Theobroma cacao HOM05D003291 ORTHO05D003923 1.3e-147 526.6 303 79.5
Potri.014G034400 Populus trichocarpa HOM05D003291 ORTHO05D003923 1.8e-147 526.2 303 80.5
Sopen04g032890 Solanum pennellii HOM05D003291 ORTHO05D003923 2.3e-147 525.8 303 80.5
Duzib093G1598 Durio zibethinus HOM05D003291 ORTHO05D003923 3.0e-147 525.4 303 79.9
Eucgr.B02922 Eucalyptus grandis HOM05D003291 ORTHO05D003923 5.1e-147 524.6 303 80.5
Solyc12g088920.2 Solanum lycopersicum HOM05D003291 ORTHO05D003923 5.1e-147 524.6 305 79.3
Sopen12g030820 Solanum pennellii HOM05D003291 ORTHO05D003923 5.1e-147 524.6 305 79.3
MD00G1187500 Malus domestica HOM05D003291 ORTHO05D003923 1.1e-146 523.5 303 80.5
Rhsim06G0046900 Rhododendron simsii HOM05D003291 ORTHO05D003923 1.9e-146 522.7 331 75.2
CAN.G371.46 Capsicum annuum HOM05D003291 ORTHO05D003923 2.5e-146 522.3 303 79.9
MD15G1086800 Malus domestica HOM05D003291 ORTHO05D003923 3.3e-146 521.9 303 80.5
TWI56G0991 Tripterygium wilfordii HOM05D003291 ORTHO05D003923 4.3e-146 521.5 303 80.2
Hund17590 Selenicereus undatus HOM05D003291 ORTHO05D003923 1.6e-145 519.6 303 79.5
Ah.05g168860 Amaranthus hybridus HOM05D003291 ORTHO05D003923 2.2e-145 519.2 303 80.2
Gohir.A06G016600 Gossypium hirsutum HOM05D003291 ORTHO05D003923 2.2e-145 519.2 303 78.5
unitig_578.g16531 Utricularia gibba HOM05D003291 ORTHO05D003923 2.2e-145 519.2 303 79.2
AUR62022448 Chenopodium quinoa HOM05D003291 ORTHO05D003923 2.8e-145 518.8 303 79.9
AUR62039319 Chenopodium quinoa HOM05D003291 ORTHO05D003923 2.8e-145 518.8 303 79.9
Gohir.D06G014700 Gossypium hirsutum HOM05D003291 ORTHO05D003923 4.8e-145 518.1 303 78.2
Gorai.010G017500 Gossypium raimondii HOM05D003291 ORTHO05D003923 4.8e-145 518.1 303 78.2
vmacro21555 Vaccinium macrocarpon HOM05D003291 ORTHO05D003923 4.8e-145 518.1 315 78.1
CDE03G0102 Ceratophyllum demersum HOM05D003291 ORTHO05D003923 1.1e-144 516.9 303 78.2
MELO3C010890.2 Cucumis melo HOM05D003291 ORTHO05D003923 1.1e-144 516.9 303 79.5
CsaV3_2G028120 Cucumis sativus L. HOM05D003291 ORTHO05D003923 1.8e-144 516.2 303 79.5
Lj5g0021120 Lotus japonicus HOM05D003291 ORTHO05D003923 1.8e-144 516.2 303 78.5
EL10Ac1g01777 Beta vulgaris HOM05D003291 ORTHO05D003923 2.4e-144 515.8 303 79.9
Cfa018512 Carpinus fangiana HOM05D003291 ORTHO05D003923 2.4e-144 515.8 303 77.6
Eucgr.F02708 Eucalyptus grandis HOM05D003291 ORTHO05D003923 3.1e-144 515.4 303 78.5
HanXRQChr10g0304011 Helianthus annuus HOM05D003291 ORTHO05D003923 3.1e-144 515.4 304 78.6
Lalb_Chr14g0368841 Lupinus albus HOM05D003291 ORTHO05D003923 4.1e-144 515.0 303 78.2
THA.LOC104806367 Tarenaya hassleriana HOM05D003291 ORTHO05D003923 4.1e-144 515.0 303 77.9
Sed0000864 Sechium edule HOM05D003291 ORTHO05D003923 6.9e-144 514.2 303 78.9
THA.LOC104813013 Tarenaya hassleriana HOM05D003291 ORTHO05D003923 6.9e-144 514.2 303 78.9
arahy.Tifrunner.gnm1.ann1.H8JSRB Arachis hypogaea HOM05D003291 ORTHO05D003923 2.0e-143 512.7 305 78.0
arahy.Tifrunner.gnm1.ann1.NP9S9N Arachis hypogaea HOM05D003291 ORTHO05D003923 2.0e-143 512.7 305 78.0
MBI03_g45559_MAGBIO Magnolia biondii HOM05D003291 ORTHO05D003923 2.0e-143 512.7 303 77.6
Glyma.17G244600 Glycine max HOM05D003291 ORTHO05D003923 2.6e-143 512.3 303 78.9
Lj4C776G1 Lonicera japonica HOM05D003291 ORTHO05D003923 2.6e-143 512.3 304 79.3
CARHR230060 Cardamine hirsuta HOM05D003291 ORTHO05D003923 3.4e-143 511.9 303 77.9
AL7G30520 Arabidopsis lyrata HOM05D003291 ORTHO05D003923 4.5e-143 511.5 303 77.9
Gorai.009G209900 Gossypium raimondii HOM05D003291 ORTHO05D003923 4.5e-143 511.5 303 76.9
HanXRQChr02g0056101 Helianthus annuus HOM05D003291 ORTHO05D003923 4.5e-143 511.5 304 77.3
Glyma.14G080800 Glycine max HOM05D003291 ORTHO05D003923 1.7e-142 509.6 303 78.2
ATR0709G069 Amborella trichopoda HOM05D003291 ORTHO05D003923 2.2e-142 509.2 304 78.3
Ca_13307_v3 Cicer arietinum L. HOM05D003291 ORTHO05D003923 2.2e-142 509.2 303 78.2
ClCG08G015660 Citrullus lanatus HOM05D003291 ORTHO05D003923 5.0e-142 508.1 303 78.5
THA.LOC104814278 Tarenaya hassleriana HOM05D003291 ORTHO05D003923 6.5e-142 507.7 303 78.2
Carub.0007s1827 Capsella rubella HOM05D003291 ORTHO05D003923 8.5e-142 507.3 303 76.9
Sp7g21090 Schrenkiella parvula HOM05D003291 ORTHO05D003923 8.5e-142 507.3 303 77.9
Thhalv10024304m.g Eutrema salsugineum HOM05D003291 ORTHO05D003923 1.1e-141 506.9 303 77.2
Gohir.A05G200600 Gossypium hirsutum HOM05D003291 ORTHO05D003923 1.4e-141 506.5 303 76.2
VMungo0647G0987 Vigna mungo HOM05D003291 ORTHO05D003923 1.4e-141 506.5 303 77.2
AT4G23000 Arabidopsis thaliana HOM05D003291 ORTHO05D003923 4.2e-141 505.0 303 77.2
Phvul.001G019800 Phaseolus vulgaris HOM05D003291 ORTHO05D003923 4.2e-141 505.0 303 77.2
Gohir.D05G203800 Gossypium hirsutum HOM05D003291 ORTHO05D003923 5.5e-141 504.6 303 75.9
Lalb_Chr22g0355231 Lupinus albus HOM05D003291 ORTHO05D003923 5.5e-141 504.6 303 77.6
CiPaw.16G047600 Carya illinoinensis HOM05D003291 ORTHO05D003923 1.2e-140 503.4 303 76.6
TPR.G13691 Trifolium pratense HOM05D003291 ORTHO05D003923 2.7e-140 502.3 303 76.6
Psat6g012080 Pisum sativum HOM05D003291 ORTHO05D003923 4.6e-140 501.5 303 76.6
C07p52330 Brassica napus HOM05D003291 ORTHO05D003923 1.0e-139 500.4 305 77.4
Sc02g0006950 Simmondsia chinensis HOM05D003291 ORTHO05D003923 5.1e-139 498.0 305 77.0
Medtr1g020000 Medicago truncatula HOM05D003291 ORTHO05D003923 8.8e-139 497.3 303 75.6
Lsat_1_v5_gn_4_124081 Lactuca sativa HOM05D003291 ORTHO05D003923 1.5e-138 496.5 293 79.5
Sabra14G0024400 Salix brachista HOM05D003291 ORTHO05D003923 2.0e-138 496.1 327 72.8
BolC7t45726H Brassica oleracea HOM05D003291 ORTHO05D003923 5.7e-138 494.6 306 76.8
Sp6g05650 Schrenkiella parvula HOM05D003291 ORTHO05D003923 5.7e-138 494.6 303 75.9
Thhalv10028387m.g Eutrema salsugineum HOM05D003291 ORTHO05D003923 9.7e-138 493.8 303 75.6
CARHR254510 Cardamine hirsuta HOM05D003291 ORTHO05D003923 1.3e-137 493.4 303 75.6
AL6G46510 Arabidopsis lyrata HOM05D003291 ORTHO05D003923 1.7e-137 493.0 303 75.2
Carub.0006s3091 Capsella rubella HOM05D003291 ORTHO05D003923 2.2e-137 492.7 303 75.2
A02p25980 Brassica napus HOM05D003291 ORTHO05D003923 2.8e-137 492.3 303 75.6
BraA02t07596Z Brassica rapa HOM05D003291 ORTHO05D003923 2.8e-137 492.3 303 75.6
A03p53920 Brassica napus HOM05D003291 ORTHO05D003923 4.8e-137 491.5 306 76.8
BraA03t14461Z Brassica rapa HOM05D003291 ORTHO05D003923 4.8e-137 491.5 306 76.8
Aa31LG9G10630 Aethionema arabicum HOM05D003291 ORTHO05D003923 1.1e-136 490.3 303 74.6
AT4G11800 Arabidopsis thaliana HOM05D003291 ORTHO05D003923 1.8e-136 489.6 303 74.9
BcaB05g23806 Brassica carinata HOM05D003291 ORTHO05D003923 4.1e-136 488.4 303 74.9
HPP92_016679 Vanilla planifolia HOM05D003291 ORTHO05D003923 5.3e-136 488.0 303 73.6
BcaC03g16327 Brassica carinata HOM05D003291 ORTHO05D003923 9.1e-136 487.3 303 74.9
C02p41460 Brassica napus HOM05D003291 ORTHO05D003923 9.1e-136 487.3 303 74.9
BolC2t10163H Brassica oleracea HOM05D003291 ORTHO05D003923 9.1e-136 487.3 303 74.9
BcaB01g01679 Brassica carinata HOM05D003291 ORTHO05D003923 1.2e-135 486.9 303 74.9
A09p27310 Brassica napus HOM05D003291 ORTHO05D003923 3.4e-135 485.3 303 74.6
BraA09t38297Z Brassica rapa HOM05D003291 ORTHO05D003923 3.4e-135 485.3 303 74.6
BolC9t56309H Brassica oleracea HOM05D003291 ORTHO05D003923 4.5e-135 485.0 303 74.6
MBI03_g35290_MAGBIO Magnolia biondii HOM05D003291 ORTHO05D003923 5.9e-135 484.6 306 73.5
C09p34640 Brassica napus HOM05D003291 ORTHO05D003923 1.0e-134 483.8 303 74.3
HanXRQChr09g0267981 Helianthus annuus HOM05D003291 ORTHO05D003923 7.2e-133 477.6 303 73.6
Nitab4.5_0000068g0460 Nicotiana tabacum HOM05D003291 ORTHO05D003923 2.3e-131 472.6 302 74.5
Os07g0106000 Oryza sativa ssp. japonica HOM05D003291 ORTHO05D003923 5.1e-131 471.5 303 71.3
AagrBONN_evm.TU.Sc2ySwM_368.1909 Anthoceros agrestis HOM05D003291 ORTHO05D003923 8.8e-131 470.7 303 71.6
Zm00001eb298290 Zea mays HOM05D003291 ORTHO05D003923 1.7e-129 466.5 303 70.0
DCAR_028414 Daucus carota HOM05D003291 ORTHO05D003923 3.8e-126 455.3 303 71.6
Haze_17563 Corylus avellana HOM05D003291 ORTHO05D003923 5.0e-126 454.9 301 70.4
Os07g0134500 Oryza sativa ssp. japonica HOM05D003291 ORTHO05D003923 6.5e-126 454.5 303 67.0
Nn1g05846 Nelumbo nucifera HOM05D003291 ORTHO05D003923 7.2e-125 451.1 303 70.6
Hma1.2p1_0260F.1_g104760 Hydrangea macrophylla HOM05D003291 ORTHO05D003923 6.1e-124 448.0 252 84.5
Mapoly0020s0063 Marchantia polymorpha HOM05D003291 ORTHO05D003923 8.0e-124 447.6 304 66.4
SEGI_03228 Sequoiadendron giganteum HOM05D003291 ORTHO05D003923 3.0e-123 445.7 283 71.7
SMO358G0100 Selaginella moellendorffii HOM05D003291 ORTHO05D003923 5.7e-122 441.4 304 66.4
Eucgr.B02927 Eucalyptus grandis HOM05D003291 ORTHO05D003923 8.2e-121 437.6 321 66.7
CSS0020917 Camellia sinensis var. sinensis HOM05D003291 ORTHO05D003923 5.9e-119 431.4 245 83.3
HanXRQChr09g0267941 Helianthus annuus HOM05D003291 ORTHO05D003923 5.9e-119 431.4 302 68.9
Pp3c5_1910 Physcomitrium patens HOM05D003291 ORTHO05D003923 3.8e-118 428.7 303 63.0
Actinidia15259 Actinidia chinensis HOM05D003291 ORTHO05D003923 1.9e-117 426.4 220 89.5
Pp3c1_37890 Physcomitrium patens HOM05D003291 ORTHO05D003923 2.5e-117 426.0 303 63.7
Haze_17560 Corylus avellana HOM05D003291 ORTHO05D003923 8.8e-115 417.5 315 63.8
Haze_17561 Corylus avellana HOM05D003291 ORTHO05D003923 8.3e-113 411.0 312 63.5
Cfa018515 Carpinus fangiana HOM05D003291 ORTHO05D003923 1.2e-111 407.1 329 61.1
AagrBONN_evm.TU.Sc2ySwM_228.3178 Anthoceros agrestis HOM05D003291 ORTHO05D003923 1.3e-110 403.7 303 60.4
QL02p005794 Quercus lobata HOM05D003291 ORTHO05D003923 5.0e-110 401.7 245 76.3
CiPaw.16G047500 Carya illinoinensis HOM05D003291 ORTHO05D003923 8.5e-110 401.0 306 63.1
Zm00001eb096290 Zea mays HOM05D003291 ORTHO05D003923 6.1e-108 394.8 249 70.7
PGSC0003DMG400015447 Solanum tuberosum HOM05D003291 ORTHO05D003923 8.8e-107 391.0 238 76.9
SHI08307 Sapria himalayana HOM05D003291 ORTHO05D003923 5.7e-106 388.3 251 72.1
CiPaw.16G047400 Carya illinoinensis HOM05D003291 ORTHO05D003923 4.4e-98 362.1 309 57.6
CiPaw.16G046700 Carya illinoinensis HOM05D003291 ORTHO05D003923 9.2e-96 354.4 303 55.4
SEGI_30325 Sequoiadendron giganteum HOM05D003291 ORTHO05D003923 2.7e-95 352.8 203 75.9
Eucgr.L01670 Eucalyptus grandis HOM05D003291 ORTHO05D003923 4.6e-95 352.1 308 60.4
Cpa.g.sc297.1 Carica papaya HOM05D003291 ORTHO05D003923 1.3e-86 323.9 236 66.9
MD08G1106100 Malus domestica HOM05D003291 ORTHO05D003923 5.8e-82 308.5 192 77.1
QL02p005735 Quercus lobata HOM05D003291 ORTHO05D003923 4.4e-74 282.3 247 56.3
CBR_g767 Chara braunii HOM05D003291 ORTHO05D000048 9.9e-74 281.2 246 52.8
Sc02g0006960 Simmondsia chinensis HOM05D003291 ORTHO05D003923 8.6e-70 268.1 302 49.3
CBR_g29432 Chara braunii HOM05D003291 ORTHO05D003923 2.1e-68 263.5 257 49.4
CiPaw.16G049300 Carya illinoinensis HOM05D003291 ORTHO05D003923 3.2e-64 249.6 197 60.4
Cre03.g150800 Chlamydomonas reinhardtii HOM05D003291 ORTHO05D003923 1.3e-38 164.5 121 55.4
MD08G1106200 Malus domestica HOM05D003291 ORTHO05D003923 1.6e-31 141.0 72 87.5
PGSC0003DMG400033662 Solanum tuberosum HOM05D003291 ORTHO05D003923 1.3e-28 131.3 92 71.7
MBI03_g42553_MAGBIO Magnolia biondii HOM05D003291 ORTHO05D003923 7.7e-26 122.1 59 86.4
QL02p005806 Quercus lobata HOM05D003291 ORTHO05D003923 5.5e-24 115.9 59 86.4
CBR_g765 Chara braunii HOM05D003291 ORTHO05D003923 2.0e-18 97.4 101 48.5
QL02p005748 Quercus lobata HOM05D003291 ORTHO05D003923 2.2e-17 94.0 55 70.9
Actinidia27514 Actinidia chinensis HOM05D003291 ORTHO05D003923 9.7e-13 78.6 53 64.2


User provided reference genes

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